RNA–Protein interactions for RNA: ENST00000461221.5

BRCA1-205, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 5,693 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-205ENST00000461221 DHX16O60231 1041 aaKnown RBP10.93□□□□□ -0.66
BRCA1-205ENST00000461221 NAP1L1P55209 391 aaKnown RBP10.93□□□□□ -0.66
BRCA1-205ENST00000461221 EFCAB2Q5VUJ9 269 aa10.93□□□□□ -0.66
BRCA1-205ENST00000461221 ROCK1Q13464 1354 aa10.93□□□□□ -0.66
BRCA1-205ENST00000461221 CWC15Q9P013 229 aaKnown RBP10.93□□□□□ -0.66
BRCA1-205ENST00000461221 CGNL1Q0VF96 1302 aa10.93□□□□□ -0.66
BRCA1-205ENST00000461221 E9PSI1 815 aa10.93□□□□□ -0.66
BRCA1-205ENST00000461221 RAD21O60216 631 aa10.93□□□□□ -0.66
BRCA1-205ENST00000461221 PDE4AP27815 886 aa10.93□□□□□ -0.66
BRCA1-205ENST00000461221 SAFBQ15424 915 aaKnown RBP eCLIP10.93□□□□□ -0.66
BRCA1-205ENST00000461221 LTV1Q96GA3 475 aaPredicted RBP10.93□□□□□ -0.66
BRCA1-205ENST00000461221 MYBBP1AQ9BQG0 1328 aaKnown RBP10.92□□□□□ -0.66
BRCA1-205ENST00000461221 FOXD4L6Q3SYB3 417 aaPredicted RBP10.92□□□□□ -0.66
BRCA1-205ENST00000461221 FOXD4L3Q6VB84 417 aaPredicted RBP10.92□□□□□ -0.66
BRCA1-205ENST00000461221 CCDC73Q6ZRK6 1079 aa10.92□□□□□ -0.66
BRCA1-205ENST00000461221 MAP7D2Q96T17 732 aa10.92□□□□□ -0.66
BRCA1-205ENST00000461221 MYO15BQ96JP2 1530 aa10.92□□□□□ -0.66
BRCA1-205ENST00000461221 IFIT2P09913 472 aaKnown RBP10.92□□□□□ -0.66
BRCA1-205ENST00000461221 CHMP5Q9NZZ3 219 aa10.92□□□□□ -0.66
BRCA1-205ENST00000461221 NFXL1Q6ZNB6 911 aa10.91□□□□□ -0.66
BRCA1-205ENST00000461221 FAM13BQ9NYF5 915 aa10.91□□□□□ -0.66
BRCA1-205ENST00000461221 FMN1Q68DA7 1419 aa10.91□□□□□ -0.66
BRCA1-205ENST00000461221 APPP05067 770 aa10.91□□□□□ -0.66
BRCA1-205ENST00000461221 NUCB2P80303 420 aa10.91□□□□□ -0.66
BRCA1-205ENST00000461221 TTC5Q8N0Z6 440 aa10.91□□□□□ -0.66
BRCA1-205ENST00000461221 R3HCC1Q9Y3T6 440 aaKnown RBP10.91□□□□□ -0.66
BRCA1-205ENST00000461221 MTERF4Q7Z6M4 381 aaKnown RBP10.91□□□□□ -0.66
BRCA1-205ENST00000461221 NAT10Q9H0A0 1025 aaKnown RBP10.91□□□□□ -0.66
BRCA1-205ENST00000461221 TEFQ10587 303 aa10.9□□□□□ -0.66
BRCA1-205ENST00000461221 FOXD1Q16676 465 aa10.9□□□□□ -0.66
BRCA1-205ENST00000461221 C9orf78Q9NZ63 289 aaPredicted RBP10.9□□□□□ -0.66
BRCA1-205ENST00000461221 HSP90AB2PQ58FF8 381 aa10.9□□□□□ -0.66
BRCA1-205ENST00000461221 CWC22Q9HCG8 908 aaKnown RBP10.9□□□□□ -0.66
BRCA1-205ENST00000461221 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.9□□□□□ -0.66
BRCA1-205ENST00000461221 IFT57Q9NWB7 429 aa10.9□□□□□ -0.66
BRCA1-205ENST00000461221 DDX19BQ9UMR2 479 aa10.9□□□□□ -0.66
BRCA1-205ENST00000461221 SMC3Q9UQE7 1217 aa10.9□□□□□ -0.66
BRCA1-205ENST00000461221 OLFM4Q6UX06 510 aa10.9□□□□□ -0.67
BRCA1-205ENST00000461221 DDX58O95786 925 aaKnown RBP10.89□□□□□ -0.67
BRCA1-205ENST00000461221 EPS15P42566 896 aa10.89□□□□□ -0.67
BRCA1-205ENST00000461221 VPS37DQ86XT2 251 aa10.89□□□□□ -0.67
BRCA1-205ENST00000461221 H0YHG0 523 aa10.89□□□□□ -0.67
BRCA1-205ENST00000461221 OFD1O75665 1012 aa10.89□□□□□ -0.67
BRCA1-205ENST00000461221 FAM43AQ8N2R8 423 aa10.89□□□□□ -0.67
BRCA1-205ENST00000461221 COG3Q96JB2 828 aa10.89□□□□□ -0.67
BRCA1-205ENST00000461221 BRMS1Q9HCU9 246 aa10.89□□□□□ -0.67
BRCA1-205ENST00000461221 API5Q9BZZ5 524 aaKnown RBP10.89□□□□□ -0.67
BRCA1-205ENST00000461221 CUX2O14529 1486 aa10.88□□□□□ -0.67
BRCA1-205ENST00000461221 HSP90AB4PQ58FF6 505 aa10.88□□□□□ -0.67
BRCA1-205ENST00000461221 CAGE1Q8TC20 777 aa10.88□□□□□ -0.67
BRCA1-205ENST00000461221 UACAQ9BZF9 1416 aa10.88□□□□□ -0.67
BRCA1-205ENST00000461221 CCDC39Q9UFE4 941 aa10.88□□□□□ -0.67
BRCA1-205ENST00000461221 ZRSR2Q15696 482 aaKnown RBP10.88□□□□□ -0.67
BRCA1-205ENST00000461221 VPS8Q8N3P4 1428 aa10.88□□□□□ -0.67
BRCA1-205ENST00000461221 INTS3Q68E01 1043 aaKnown RBP10.88□□□□□ -0.67
BRCA1-205ENST00000461221 RAB3GAP2Q9H2M9 1393 aa10.87□□□□□ -0.67
BRCA1-205ENST00000461221 VPS37CA5D8V6 355 aaPredicted RBP10.87□□□□□ -0.67
BRCA1-205ENST00000461221 G3BP1Q13283 466 aaKnown RBP eCLIP10.87□□□□□ -0.67
BRCA1-205ENST00000461221 CCP110O43303 1012 aa10.87□□□□□ -0.67
BRCA1-205ENST00000461221 NGEFQ8N5V2 710 aa10.87□□□□□ -0.67
BRCA1-205ENST00000461221 RRP1P56182 461 aaKnown RBP10.87□□□□□ -0.67
BRCA1-205ENST00000461221 RSPH4AQ5TD94 716 aa10.87□□□□□ -0.67
BRCA1-205ENST00000461221 KIF3BO15066 747 aa10.87□□□□□ -0.67
BRCA1-205ENST00000461221 ERC2O15083 957 aa10.87□□□□□ -0.67
BRCA1-205ENST00000461221 CCDC66A2RUB6 948 aa10.87□□□□□ -0.67
BRCA1-205ENST00000461221 XBP1P17861 261 aa10.87□□□□□ -0.67
BRCA1-205ENST00000461221 RRP7AQ9Y3A4 280 aaKnown RBP10.87□□□□□ -0.67
BRCA1-205ENST00000461221 EVA1CP58658 441 aa10.86□□□□□ -0.67
BRCA1-205ENST00000461221 ZFYVE27Q5T4F4 411 aa10.86□□□□□ -0.67
BRCA1-205ENST00000461221 MSH5O43196 834 aa10.86□□□□□ -0.67
BRCA1-205ENST00000461221 LETM1O95202 739 aaPredicted RBP10.85□□□□□ -0.67
BRCA1-205ENST00000461221 RALYLQ86SE5 291 aaKnown RBP10.85□□□□□ -0.67
BRCA1-205ENST00000461221 SLC4A3P48751 1232 aa10.85□□□□□ -0.67
BRCA1-205ENST00000461221 ELL2O00472 640 aaPredicted RBP10.84□□□□□ -0.67
BRCA1-205ENST00000461221 WASHC2CQ9Y4E1 1318 aa10.84□□□□□ -0.67
BRCA1-205ENST00000461221 SMARCE1Q969G3 411 aa10.84□□□□□ -0.67
BRCA1-205ENST00000461221 CRBNQ96SW2 442 aa10.84□□□□□ -0.67
BRCA1-205ENST00000461221 EVC2Q86UK5 1308 aa10.84□□□□□ -0.67
BRCA1-205ENST00000461221 FBXW7Q969H0 707 aa10.84□□□□□ -0.67
BRCA1-205ENST00000461221 PDILTQ8N807 584 aa10.83□□□□□ -0.68
BRCA1-205ENST00000461221 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.83□□□□□ -0.68
BRCA1-205ENST00000461221 BCL2L13Q9BXK5 485 aa10.83□□□□□ -0.68
BRCA1-205ENST00000461221 COG6Q9Y2V7 657 aa10.83□□□□□ -0.68
BRCA1-205ENST00000461221 EIF2S2P20042 333 aaKnown RBP10.83□□□□□ -0.68
BRCA1-205ENST00000461221 DHX8Q14562 1220 aaKnown RBP10.83□□□□□ -0.68
BRCA1-205ENST00000461221 ANKRD18AQ8IVF6 992 aa10.83□□□□□ -0.68
BRCA1-205ENST00000461221 ERLIN2O94905 339 aa10.82□□□□□ -0.68
BRCA1-205ENST00000461221 PIP4K2AP48426 406 aaPredicted RBP10.82□□□□□ -0.68
BRCA1-205ENST00000461221 AAMPQ13685 434 aa10.82□□□□□ -0.68
BRCA1-205ENST00000461221 DZIP1LQ8IYY4 767 aaKnown RBP10.82□□□□□ -0.68
BRCA1-205ENST00000461221 L3MBTL2Q969R5 705 aa10.82□□□□□ -0.68
BRCA1-205ENST00000461221 NINLQ9Y2I6 1382 aa10.82□□□□□ -0.68
BRCA1-205ENST00000461221 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.82□□□□□ -0.68
BRCA1-205ENST00000461221 PSMA5P28066 241 aa10.82□□□□□ -0.68
BRCA1-205ENST00000461221 FILIP1LQ4L180 1135 aa10.82□□□□□ -0.68
BRCA1-205ENST00000461221 WWC2Q6AWC2 1192 aa10.82□□□□□ -0.68
BRCA1-205ENST00000461221 LEKR1Q6ZMV7 388 aa10.82□□□□□ -0.68
BRCA1-205ENST00000461221 EXOC6Q8TAG9 804 aa10.82□□□□□ -0.68
BRCA1-205ENST00000461221 RBM33Q96EV2 1170 aaKnown RBP10.82□□□□□ -0.68
BRCA1-205ENST00000461221 TRAK1Q9UPV9 953 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms