RNA–Protein interactions for RNA: ENST00000460563.5

HMGN2-202, Transcript of high mobility group nucleosomal binding domain 2, humanhuman

TSL 5

Gene HMGN2, Length 1,045 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2-202ENST00000460563 PCDHB8Q9UN66 801 aa17.29■□□□□ 0.36
HMGN2-202ENST00000460563 PCDHB13Q9Y5F0 798 aa17.29■□□□□ 0.36
HMGN2-202ENST00000460563 ZNF467Q7Z7K2 595 aaPredicted RBP17.28■□□□□ 0.36
HMGN2-202ENST00000460563 KIF12Q96FN5 646 aa17.28■□□□□ 0.36
HMGN2-202ENST00000460563 LRRC9Q6ZRR7 1453 aa17.28■□□□□ 0.36
HMGN2-202ENST00000460563 VPS8Q8N3P4 1428 aa17.28■□□□□ 0.36
HMGN2-202ENST00000460563 ZNF335Q9H4Z2 1342 aaPredicted RBP17.27■□□□□ 0.36
HMGN2-202ENST00000460563 A2ML1A8K2U0 1454 aa17.27■□□□□ 0.36
HMGN2-202ENST00000460563 STK25O00506 426 aa17.27■□□□□ 0.36
HMGN2-202ENST00000460563 IQSEC2Q5JU85 1478 aa17.26■□□□□ 0.35
HMGN2-202ENST00000460563 LOC105371045A0A1W2PR82 267 aa17.26■□□□□ 0.35
HMGN2-202ENST00000460563 KIF3BO15066 747 aa17.26■□□□□ 0.35
HMGN2-202ENST00000460563 NEURL4Q96JN8 1562 aa17.25■□□□□ 0.35
HMGN2-202ENST00000460563 MAP3K13O43283 966 aa17.25■□□□□ 0.35
HMGN2-202ENST00000460563 PHF12Q96QT6 1004 aa17.25■□□□□ 0.35
HMGN2-202ENST00000460563 PZPP20742 1482 aa17.24■□□□□ 0.35
HMGN2-202ENST00000460563 FBXO31Q5XUX0 539 aaPredicted RBP17.24■□□□□ 0.35
HMGN2-202ENST00000460563 ZNF579Q8NAF0 562 aaKnown RBP17.24■□□□□ 0.35
HMGN2-202ENST00000460563 FAM135AQ9P2D6 1515 aa17.24■□□□□ 0.35
HMGN2-202ENST00000460563 RNF17Q9BXT8 1623 aaKnown RBP17.24■□□□□ 0.35
HMGN2-202ENST00000460563 MAST1Q9Y2H9 1570 aa17.23■□□□□ 0.35
HMGN2-202ENST00000460563 PAXIP1Q6ZW49 1069 aaPredicted RBP17.23■□□□□ 0.35
HMGN2-202ENST00000460563 SPATA31D1Q6ZQQ2 1576 aa17.23■□□□□ 0.35
HMGN2-202ENST00000460563 BCL11BQ9C0K0 894 aaPredicted RBP17.22■□□□□ 0.35
HMGN2-202ENST00000460563 TNRQ92752 1358 aa17.22■□□□□ 0.35
HMGN2-202ENST00000460563 CEP152O94986 1710 aa17.21■□□□□ 0.35
HMGN2-202ENST00000460563 NKX1-1Q15270 411 aaPredicted RBP17.21■□□□□ 0.35
HMGN2-202ENST00000460563 IFNL1Q8IU54 200 aa17.21■□□□□ 0.35
HMGN2-202ENST00000460563 DISP3Q9P2K9 1392 aa17.2■□□□□ 0.34
HMGN2-202ENST00000460563 KANK4Q5T7N3 995 aaPredicted RBP17.2■□□□□ 0.34
HMGN2-202ENST00000460563 MROH1Q8NDA8 1641 aa17.2■□□□□ 0.34
HMGN2-202ENST00000460563 ZC3H13Q5T200 1668 aaKnown RBP17.2■□□□□ 0.34
HMGN2-202ENST00000460563 EIF2AK4Q9P2K8 1649 aaKnown RBP17.19■□□□□ 0.34
HMGN2-202ENST00000460563 CFAP44Q96MT7 982 aa17.19■□□□□ 0.34
HMGN2-202ENST00000460563 STK24Q9Y6E0 443 aa17.19■□□□□ 0.34
HMGN2-202ENST00000460563 CROCC2H7BZ55 1655 aa17.19■□□□□ 0.34
HMGN2-202ENST00000460563 ABCC3O15438 1527 aa17.18■□□□□ 0.34
HMGN2-202ENST00000460563 CFAP65Q6ZU64 1925 aaKnown RBP17.18■□□□□ 0.34
HMGN2-202ENST00000460563 RSPH4AQ5TD94 716 aa17.18■□□□□ 0.34
HMGN2-202ENST00000460563 WASHC2CQ9Y4E1 1318 aa17.18■□□□□ 0.34
HMGN2-202ENST00000460563 MAP3K1Q13233 1512 aa17.17■□□□□ 0.34
HMGN2-202ENST00000460563 PDAP1Q13442 181 aaKnown RBP17.17■□□□□ 0.34
HMGN2-202ENST00000460563 MYOM3Q5VTT5 1437 aa17.16■□□□□ 0.34
HMGN2-202ENST00000460563 HAP1P54257 671 aaPredicted RBP17.16■□□□□ 0.34
HMGN2-202ENST00000460563 ILDR2Q71H61 639 aa17.16■□□□□ 0.34
HMGN2-202ENST00000460563 UGGT1Q9NYU2 1555 aa17.15■□□□□ 0.34
HMGN2-202ENST00000460563 TSPY4P0CV99 314 aa17.15■□□□□ 0.34
HMGN2-202ENST00000460563 TSPY10P0CW01 314 aa17.15■□□□□ 0.34
HMGN2-202ENST00000460563 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.15■□□□□ 0.344e-8■□□□□ 11.2
HMGN2-202ENST00000460563 UBAP1LF5GYI3 381 aa17.14■□□□□ 0.33
HMGN2-202ENST00000460563 SPRYD3Q8NCJ5 442 aa17.14■□□□□ 0.33
HMGN2-202ENST00000460563 MIA2Q96PC5 1412 aa17.13■□□□□ 0.33
HMGN2-202ENST00000460563 NLRP1Q9C000 1473 aa17.13■□□□□ 0.33
HMGN2-202ENST00000460563 VWDEQ8N2E2 1590 aa17.13■□□□□ 0.33
HMGN2-202ENST00000460563 DEPDC5O75140 1603 aa17.13■□□□□ 0.33
HMGN2-202ENST00000460563 PTPN23Q9H3S7 1636 aa17.12■□□□□ 0.33
HMGN2-202ENST00000460563 PSEN1P49768 467 aa17.12■□□□□ 0.33
HMGN2-202ENST00000460563 IQGAP1P46940 1657 aa17.12■□□□□ 0.33
HMGN2-202ENST00000460563 ERVK-7P63135 1459 aa17.12■□□□□ 0.33
HMGN2-202ENST00000460563 STRCP1A6NGW2 1772 aa17.11■□□□□ 0.33
HMGN2-202ENST00000460563 UBR1Q8IWV7 1749 aa17.1■□□□□ 0.33
HMGN2-202ENST00000460563 SHANK2Q9UPX8 1470 aa17.1■□□□□ 0.33
HMGN2-202ENST00000460563 DUOX2Q9NRD8 1548 aa17.1■□□□□ 0.33
HMGN2-202ENST00000460563 CPS1P31327 1500 aa17.09■□□□□ 0.33
HMGN2-202ENST00000460563 NPHP4O75161 1426 aaPredicted RBP17.08■□□□□ 0.32
HMGN2-202ENST00000460563 EVX2Q03828 476 aa17.08■□□□□ 0.32
HMGN2-202ENST00000460563 PRDM15P57071 1507 aaPredicted RBP17.07■□□□□ 0.32
HMGN2-202ENST00000460563 MED14O60244 1454 aa17.07■□□□□ 0.32
HMGN2-202ENST00000460563 HAX1O00165 279 aa17.06■□□□□ 0.32
HMGN2-202ENST00000460563 ABCC5O15440 1437 aa17.05■□□□□ 0.32
HMGN2-202ENST00000460563 ANKLE2Q86XL3 938 aa17.05■□□□□ 0.32
HMGN2-202ENST00000460563 THEMISQ8N1K5 641 aaPredicted RBP17.05■□□□□ 0.32
HMGN2-202ENST00000460563 MS4A3Q96HJ5 214 aa17.05■□□□□ 0.32
HMGN2-202ENST00000460563 ALKQ9UM73 1620 aa17.05■□□□□ 0.32
HMGN2-202ENST00000460563 KIF15Q9NS87 1388 aa17.04■□□□□ 0.32
HMGN2-202ENST00000460563 GTPBP6O43824 516 aaPredicted RBP17.04■□□□□ 0.32
HMGN2-202ENST00000460563 DAPK1P53355 1430 aa17.03■□□□□ 0.32
HMGN2-202ENST00000460563 TRPC6Q9Y210 931 aa17.02■□□□□ 0.32
HMGN2-202ENST00000460563 ERBINQ96RT1 1412 aa17.02■□□□□ 0.31
HMGN2-202ENST00000460563 PIK3C2BO00750 1634 aa17.01■□□□□ 0.31
HMGN2-202ENST00000460563 PIP4K2BP78356 416 aa17.01■□□□□ 0.31
HMGN2-202ENST00000460563 FGD6Q6ZV73 1430 aa17.01■□□□□ 0.31
HMGN2-202ENST00000460563 SYNMO15061 1565 aa17■□□□□ 0.31
HMGN2-202ENST00000460563 RRP7BPQ9NSQ0 103 aa17■□□□□ 0.31
HMGN2-202ENST00000460563 SOCS7O14512 581 aa16.99■□□□□ 0.31
HMGN2-202ENST00000460563 MED1Q15648 1581 aaPredicted RBP16.98■□□□□ 0.31
HMGN2-202ENST00000460563 XIRP1Q702N8 1843 aaKnown RBP16.98■□□□□ 0.31
HMGN2-202ENST00000460563 HSPA1LP34931 641 aa16.98■□□□□ 0.31
HMGN2-202ENST00000460563 LRRC7Q96NW7 1537 aa16.97■□□□□ 0.31
HMGN2-202ENST00000460563 TSHZ2Q9NRE2 1034 aa16.97■□□□□ 0.31
HMGN2-202ENST00000460563 SCAF11Q99590 1463 aaKnown RBP16.97■□□□□ 0.31
HMGN2-202ENST00000460563 ARHGAP31Q2M1Z3 1444 aa16.96■□□□□ 0.31
HMGN2-202ENST00000460563 SLIT1O75093 1534 aa16.96■□□□□ 0.31
HMGN2-202ENST00000460563 ARHGAP23Q9P227 1491 aa16.96■□□□□ 0.31
HMGN2-202ENST00000460563 TOM1O60784 492 aa16.95■□□□□ 0.3
HMGN2-202ENST00000460563 CHIC2Q9UKJ5 165 aa16.95■□□□□ 0.3
HMGN2-202ENST00000460563 LTKP29376 864 aa16.93■□□□□ 0.3
HMGN2-202ENST00000460563 POTEHQ6S545 545 aa16.93■□□□□ 0.3
HMGN2-202ENST00000460563 EFCAB6Q5THR3 1501 aa16.92■□□□□ 0.3
HMGN2-202ENST00000460563 LMTK2Q8IWU2 1503 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms