RNA–Protein interactions for RNA: ENST00000459954.1

UBQLN4-202, Transcript of ubiquilin 4, humanhuman

TSL 2

Gene UBQLN4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-202ENST00000459954 IRX6P78412 446 aaPredicted RBP8.21□□□□□ -1.1
UBQLN4-202ENST00000459954 NLRP13Q86W25 1043 aa8.21□□□□□ -1.1
UBQLN4-202ENST00000459954 DEPDC5O75140 1603 aa8.21□□□□□ -1.1
UBQLN4-202ENST00000459954 PLA2R1Q13018 1463 aa8.2□□□□□ -1.1
UBQLN4-202ENST00000459954 INO80Q9ULG1 1556 aaPredicted RBP8.2□□□□□ -1.1
UBQLN4-202ENST00000459954 B4GALNT3Q6L9W6 998 aa8.2□□□□□ -1.1
UBQLN4-202ENST00000459954 DCAF11Q8TEB1 546 aa8.2□□□□□ -1.1
UBQLN4-202ENST00000459954 PER1O15534 1290 aaPredicted RBP8.19□□□□□ -1.1
UBQLN4-202ENST00000459954 PIAS4Q8N2W9 510 aaPredicted RBP8.19□□□□□ -1.1
UBQLN4-202ENST00000459954 CCDC136Q96JN2 1154 aa8.19□□□□□ -1.1
UBQLN4-202ENST00000459954 KIDINS220Q9ULH0 1771 aa8.19□□□□□ -1.1
UBQLN4-202ENST00000459954 BLMP54132 1417 aaPredicted RBP8.19□□□□□ -1.1
UBQLN4-202ENST00000459954 DIP2CQ9Y2E4 1556 aa8.18□□□□□ -1.1
UBQLN4-202ENST00000459954 MADDQ8WXG6 1647 aa8.18□□□□□ -1.1
UBQLN4-202ENST00000459954 TET3O43151 1660 aa8.18□□□□□ -1.1
UBQLN4-202ENST00000459954 KDM4FA0A1W2PPD8 638 aa8.18□□□□□ -1.1
UBQLN4-202ENST00000459954 KIF3BO15066 747 aa8.18□□□□□ -1.1
UBQLN4-202ENST00000459954 KANK1Q14678 1352 aa8.18□□□□□ -1.1
UBQLN4-202ENST00000459954 SYNMO15061 1565 aa8.18□□□□□ -1.1
UBQLN4-202ENST00000459954 ZNF326Q5BKZ1 582 aaKnown RBP8.17□□□□□ -1.1
UBQLN4-202ENST00000459954 TRPM2O94759 1503 aa8.17□□□□□ -1.1
UBQLN4-202ENST00000459954 KIF1BO60333 1816 aa8.17□□□□□ -1.1
UBQLN4-202ENST00000459954 TCERG1O14776 1098 aaKnown RBP8.16□□□□□ -1.1
UBQLN4-202ENST00000459954 MS4A1P11836 297 aa8.16□□□□□ -1.1
UBQLN4-202ENST00000459954 ADRA2BP18089 450 aa8.16□□□□□ -1.1
UBQLN4-202ENST00000459954 RRP1P56182 461 aaKnown RBP8.16□□□□□ -1.1
UBQLN4-202ENST00000459954 TESK2Q96S53 571 aa8.16□□□□□ -1.1
UBQLN4-202ENST00000459954 NPC1L1Q9UHC9 1359 aa8.16□□□□□ -1.1
UBQLN4-202ENST00000459954 IFT172Q9UG01 1749 aa8.15□□□□□ -1.1
UBQLN4-202ENST00000459954 KDM5AP29375 1690 aaKnown RBP8.15□□□□□ -1.1
UBQLN4-202ENST00000459954 ABCA6Q8N139 1617 aa8.15□□□□□ -1.1
UBQLN4-202ENST00000459954 VWDEQ8N2E2 1590 aa8.15□□□□□ -1.1
UBQLN4-202ENST00000459954 NPATQ14207 1427 aa8.15□□□□□ -1.1
UBQLN4-202ENST00000459954 TMF1P82094 1093 aa8.15□□□□□ -1.1
UBQLN4-202ENST00000459954 CDCA8Q53HL2 280 aa8.15□□□□□ -1.1
UBQLN4-202ENST00000459954 GGT6Q6P531 493 aa8.15□□□□□ -1.1
UBQLN4-202ENST00000459954 RCAN3Q9UKA8 241 aa8.15□□□□□ -1.1
UBQLN4-202ENST00000459954 KDM2AQ9Y2K7 1162 aa8.15□□□□□ -1.1
UBQLN4-202ENST00000459954 MYOM1P52179 1685 aa8.14□□□□□ -1.11
UBQLN4-202ENST00000459954 PTPRTO14522 1441 aa8.14□□□□□ -1.11
UBQLN4-202ENST00000459954 SETD1BQ9UPS6 1966 aaKnown RBP8.14□□□□□ -1.11
UBQLN4-202ENST00000459954 IPO9Q96P70 1041 aaKnown RBP8.14□□□□□ -1.11
UBQLN4-202ENST00000459954 NOP58Q9Y2X3 529 aaKnown RBP8.14□□□□□ -1.11
UBQLN4-202ENST00000459954 VIRMAQ69YN4 1812 aaKnown RBP8.14□□□□□ -1.11
UBQLN4-202ENST00000459954 ADAMTSL3P82987 1691 aa8.14□□□□□ -1.11
UBQLN4-202ENST00000459954 ZMYM3Q14202 1370 aa8.13□□□□□ -1.11
UBQLN4-202ENST00000459954 ANP32AP39687 249 aaKnown RBP8.13□□□□□ -1.11
UBQLN4-202ENST00000459954 NGEFQ8N5V2 710 aa8.13□□□□□ -1.11
UBQLN4-202ENST00000459954 POLR3GLQ9BT43 218 aa8.13□□□□□ -1.11
UBQLN4-202ENST00000459954 MYO3AQ8NEV4 1616 aa8.13□□□□□ -1.11
UBQLN4-202ENST00000459954 PTPRMP28827 1452 aa8.13□□□□□ -1.11
UBQLN4-202ENST00000459954 ARHGAP31Q2M1Z3 1444 aa8.12□□□□□ -1.11
UBQLN4-202ENST00000459954 MLECQ14165 292 aa8.12□□□□□ -1.11
UBQLN4-202ENST00000459954 SCAF11Q99590 1463 aaKnown RBP8.12□□□□□ -1.11
UBQLN4-202ENST00000459954 PIK3C2GO75747 1445 aa8.12□□□□□ -1.11
UBQLN4-202ENST00000459954 CLTCL1P53675 1640 aa8.11□□□□□ -1.11
UBQLN4-202ENST00000459954 ASXL1Q8IXJ9 1541 aa8.11□□□□□ -1.11
UBQLN4-202ENST00000459954 DISP3Q9P2K9 1392 aa8.1□□□□□ -1.11
UBQLN4-202ENST00000459954 NBPF1Q3BBV0 1214 aa8.1□□□□□ -1.11
UBQLN4-202ENST00000459954 BCL11AQ9H165 835 aa8.1□□□□□ -1.11
UBQLN4-202ENST00000459954 SLC52A1Q9NWF4 448 aa8.1□□□□□ -1.11
UBQLN4-202ENST00000459954 MYOM2P54296 1465 aa8.1□□□□□ -1.11
UBQLN4-202ENST00000459954 MROH2AA6NES4 1674 aa8.1□□□□□ -1.11
UBQLN4-202ENST00000459954 LMTK2Q8IWU2 1503 aa8.09□□□□□ -1.11
UBQLN4-202ENST00000459954 PANK3Q9H999 370 aa8.09□□□□□ -1.11
UBQLN4-202ENST00000459954 ZBTB47Q9UFB7 747 aaPredicted RBP8.09□□□□□ -1.11
UBQLN4-202ENST00000459954 DMRT2Q9Y5R5 561 aa8.09□□□□□ -1.11
UBQLN4-202ENST00000459954 SETBP1Q9Y6X0 1596 aa8.09□□□□□ -1.11
UBQLN4-202ENST00000459954 EIF3AQ14152 1382 aaKnown RBP8.09□□□□□ -1.12
UBQLN4-202ENST00000459954 ZC3H13Q5T200 1668 aaKnown RBP8.08□□□□□ -1.12
UBQLN4-202ENST00000459954 PRKCSHP14314 528 aaPredicted RBP8.08□□□□□ -1.12
UBQLN4-202ENST00000459954 HDGFP51858 240 aaKnown RBP8.08□□□□□ -1.12
UBQLN4-202ENST00000459954 USP35Q9P2H5 1018 aa8.08□□□□□ -1.12
UBQLN4-202ENST00000459954 SBNO2Q9Y2G9 1366 aa8.08□□□□□ -1.12
UBQLN4-202ENST00000459954 NLRP1Q9C000 1473 aa8.07□□□□□ -1.12
UBQLN4-202ENST00000459954 THEMISQ8N1K5 641 aaPredicted RBP8.07□□□□□ -1.12
UBQLN4-202ENST00000459954 EXOC6Q8TAG9 804 aa8.07□□□□□ -1.12
UBQLN4-202ENST00000459954 BACH2Q9BYV9 841 aa8.07□□□□□ -1.12
UBQLN4-202ENST00000459954 MROH1Q8NDA8 1641 aa8.07□□□□□ -1.12
UBQLN4-202ENST00000459954 USP32Q8NFA0 1604 aa8.07□□□□□ -1.12
UBQLN4-202ENST00000459954 ZNF521Q96K83 1311 aa8.06□□□□□ -1.12
UBQLN4-202ENST00000459954 RGL3Q3MIN7 710 aa8.06□□□□□ -1.12
UBQLN4-202ENST00000459954 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.06□□□□□ -1.12
UBQLN4-202ENST00000459954 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.06□□□□□ -1.12
UBQLN4-202ENST00000459954 KNSTRNQ9Y448 316 aa8.06□□□□□ -1.12
UBQLN4-202ENST00000459954 FER1L4A9Z1Z3 1794 aa8.06□□□□□ -1.12
UBQLN4-202ENST00000459954 PPLO60437 1756 aa8.06□□□□□ -1.12
UBQLN4-202ENST00000459954 NRXN1Q9ULB1 1477 aa8.06□□□□□ -1.12
UBQLN4-202ENST00000459954 ABCC3O15438 1527 aa8.05□□□□□ -1.12
UBQLN4-202ENST00000459954 PDE4AP27815 886 aa8.05□□□□□ -1.12
UBQLN4-202ENST00000459954 AMER1Q5JTC6 1135 aaPredicted RBP8.05□□□□□ -1.12
UBQLN4-202ENST00000459954 TRMT2AQ8IZ69 625 aaKnown RBP8.05□□□□□ -1.12
UBQLN4-202ENST00000459954 DDRGK1Q96HY6 314 aa8.05□□□□□ -1.12
UBQLN4-202ENST00000459954 TNRQ92752 1358 aa8.05□□□□□ -1.12
UBQLN4-202ENST00000459954 EFCAB6Q5THR3 1501 aa8.04□□□□□ -1.12
UBQLN4-202ENST00000459954 PPP2R1AP30153 589 aa8.04□□□□□ -1.12
UBQLN4-202ENST00000459954 NCBP3Q53F19 620 aaKnown RBP8.04□□□□□ -1.12
UBQLN4-202ENST00000459954 NINLQ9Y2I6 1382 aa8.04□□□□□ -1.12
UBQLN4-202ENST00000459954 PPM1GO15355 546 aaPredicted RBP8.03□□□□□ -1.12
UBQLN4-202ENST00000459954 PAK3O75914 559 aaPredicted RBP8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms