RNA–Protein interactions for RNA: ENST00000455853.1

LINC00473-202, long intergenic non-protein coding RNA 473, humanhuman

TSL 1 (best)

Gene LINC00473, Length 1,822 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00473-202ENST00000455853 CNGB1Q14028 1251 aaPredicted RBP16.99■□□□□ 0.31
LINC00473-202ENST00000455853 RNF17Q9BXT8 1623 aaKnown RBP16.99■□□□□ 0.31
LINC00473-202ENST00000455853 MLECQ14165 292 aa16.98■□□□□ 0.31
LINC00473-202ENST00000455853 BACH2Q9BYV9 841 aa16.98■□□□□ 0.31
LINC00473-202ENST00000455853 ADAMTSL3P82987 1691 aa16.98■□□□□ 0.31
LINC00473-202ENST00000455853 SIGLEC1Q9BZZ2 1709 aa16.98■□□□□ 0.31
LINC00473-202ENST00000455853 PER1O15534 1290 aaPredicted RBP16.98■□□□□ 0.31
LINC00473-202ENST00000455853 PDE4AP27815 886 aa16.98■□□□□ 0.31
LINC00473-202ENST00000455853 HNRNPMP52272 730 aaKnown RBP eCLIP16.98■□□□□ 0.31
LINC00473-202ENST00000455853 DDRGK1Q96HY6 314 aa16.98■□□□□ 0.31
LINC00473-202ENST00000455853 PPM1GO15355 546 aaPredicted RBP16.97■□□□□ 0.31
LINC00473-202ENST00000455853 A2MP01023 1474 aa16.96■□□□□ 0.31
LINC00473-202ENST00000455853 ERBINQ96RT1 1412 aa16.96■□□□□ 0.31
LINC00473-202ENST00000455853 PTPRMP28827 1452 aa16.96■□□□□ 0.31
LINC00473-202ENST00000455853 MLH3Q9UHC1 1453 aa16.94■□□□□ 0.3
LINC00473-202ENST00000455853 SYCP2Q9BX26 1530 aa16.94■□□□□ 0.3
LINC00473-202ENST00000455853 MADDQ8WXG6 1647 aa16.94■□□□□ 0.3
LINC00473-202ENST00000455853 TMF1P82094 1093 aa16.93■□□□□ 0.3
LINC00473-202ENST00000455853 DUOX2Q9NRD8 1548 aa16.93■□□□□ 0.3
LINC00473-202ENST00000455853 HECW2Q9P2P5 1572 aa16.93■□□□□ 0.3
LINC00473-202ENST00000455853 DIP2CQ9Y2E4 1556 aa16.92■□□□□ 0.3
LINC00473-202ENST00000455853 PLA2R1Q13018 1463 aa16.92■□□□□ 0.3
LINC00473-202ENST00000455853 PLPPR3Q6T4P5 718 aa16.91■□□□□ 0.3
LINC00473-202ENST00000455853 STAC3Q96MF2 364 aa16.9■□□□□ 0.3
LINC00473-202ENST00000455853 TESK2Q96S53 571 aa16.9■□□□□ 0.3
LINC00473-202ENST00000455853 ABCA6Q8N139 1617 aa16.89■□□□□ 0.3
LINC00473-202ENST00000455853 SPAG9O60271 1321 aaKnown RBP16.89■□□□□ 0.3
LINC00473-202ENST00000455853 IQGAP1P46940 1657 aa16.89■□□□□ 0.29
LINC00473-202ENST00000455853 DISP3Q9P2K9 1392 aa16.88■□□□□ 0.29
LINC00473-202ENST00000455853 SYNMO15061 1565 aa16.88■□□□□ 0.29
LINC00473-202ENST00000455853 RIMS1Q86UR5 1692 aaKnown RBP16.87■□□□□ 0.29
LINC00473-202ENST00000455853 CDCA8Q53HL2 280 aa16.86■□□□□ 0.29
LINC00473-202ENST00000455853 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.86■□□□□ 0.29
LINC00473-202ENST00000455853 KIDINS220Q9ULH0 1771 aa16.86■□□□□ 0.29
LINC00473-202ENST00000455853 CENPQQ7L2Z9 268 aaPredicted RBP16.85■□□□□ 0.29
LINC00473-202ENST00000455853 PANK3Q9H999 370 aa16.85■□□□□ 0.29
LINC00473-202ENST00000455853 NBPF1Q3BBV0 1214 aa16.84■□□□□ 0.29
LINC00473-202ENST00000455853 NPM2Q86SE8 214 aaKnown RBP16.84■□□□□ 0.29
LINC00473-202ENST00000455853 EIF3AQ14152 1382 aaKnown RBP16.84■□□□□ 0.29
LINC00473-202ENST00000455853 SPHKAPQ2M3C7 1700 aa16.84■□□□□ 0.29
LINC00473-202ENST00000455853 NPC1L1Q9UHC9 1359 aa16.84■□□□□ 0.29
LINC00473-202ENST00000455853 REREQ9P2R6 1566 aa16.84■□□□□ 0.29
LINC00473-202ENST00000455853 CDCA7LQ96GN5 454 aa16.83■□□□□ 0.28
LINC00473-202ENST00000455853 CRBNQ96SW2 442 aa16.83■□□□□ 0.28
LINC00473-202ENST00000455853 KIAA1210Q9ULL0 1709 aa16.83■□□□□ 0.28
LINC00473-202ENST00000455853 PIK3C2GO75747 1445 aa16.83■□□□□ 0.28
LINC00473-202ENST00000455853 CEP152O94986 1710 aa16.82■□□□□ 0.28
LINC00473-202ENST00000455853 ATP7AQ04656 1500 aa16.82■□□□□ 0.28
LINC00473-202ENST00000455853 SLC24A1O60721 1099 aa16.82■□□□□ 0.28
LINC00473-202ENST00000455853 NEFMP07197 916 aa16.82■□□□□ 0.28
LINC00473-202ENST00000455853 CEBPAP49715 358 aaPredicted RBP16.82■□□□□ 0.28
LINC00473-202ENST00000455853 CC2D1BQ5T0F9 858 aaKnown RBP16.82■□□□□ 0.28
LINC00473-202ENST00000455853 NGEFQ8N5V2 710 aa16.81■□□□□ 0.28
LINC00473-202ENST00000455853 SALL2Q9Y467 1007 aaPredicted RBP16.81■□□□□ 0.28
LINC00473-202ENST00000455853 KDM2BQ8NHM5 1336 aa16.81■□□□□ 0.28
LINC00473-202ENST00000455853 AGLP35573 1532 aa16.8■□□□□ 0.28
LINC00473-202ENST00000455853 NEURL4Q96JN8 1562 aa16.8■□□□□ 0.28
LINC00473-202ENST00000455853 WDR43Q15061 677 aaKnown RBP eCLIP16.8■□□□□ 0.28
LINC00473-202ENST00000455853 RGL3Q3MIN7 710 aa16.8■□□□□ 0.28
LINC00473-202ENST00000455853 INO80Q9ULG1 1556 aaPredicted RBP16.8■□□□□ 0.28
LINC00473-202ENST00000455853 SENP3-EIF4A1A0A087X0R7 540 aa16.8■□□□□ 0.28
LINC00473-202ENST00000455853 ASXL1Q8IXJ9 1541 aa16.79■□□□□ 0.28
LINC00473-202ENST00000455853 KNSTRNQ9Y448 316 aa16.79■□□□□ 0.28
LINC00473-202ENST00000455853 FER1L4A9Z1Z3 1794 aa16.79■□□□□ 0.28
LINC00473-202ENST00000455853 TRPM2O94759 1503 aa16.78■□□□□ 0.28
LINC00473-202ENST00000455853 VIRMAQ69YN4 1812 aaKnown RBP16.78■□□□□ 0.28
LINC00473-202ENST00000455853 ZNF521Q96K83 1311 aa16.77■□□□□ 0.28
LINC00473-202ENST00000455853 SCAF11Q99590 1463 aaKnown RBP16.77■□□□□ 0.28
LINC00473-202ENST00000455853 KDM5AP29375 1690 aaKnown RBP16.76■□□□□ 0.27
LINC00473-202ENST00000455853 GOLGA2Q08379 1002 aa16.76■□□□□ 0.27
LINC00473-202ENST00000455853 LMTK3Q96Q04 1460 aa16.76■□□□□ 0.27
LINC00473-202ENST00000455853 PPP2R1AP30153 589 aa16.75■□□□□ 0.27
LINC00473-202ENST00000455853 FAM161AQ3B820 660 aa16.75■□□□□ 0.27
LINC00473-202ENST00000455853 DUSP27Q5VZP5 1158 aa16.75■□□□□ 0.27
LINC00473-202ENST00000455853 DAXXQ9UER7 740 aaPredicted RBP16.75■□□□□ 0.27
LINC00473-202ENST00000455853 RTEL1-TNFRSF6BF6WH68 1400 aa16.75■□□□□ 0.27
LINC00473-202ENST00000455853 PLIN1O60240 522 aa16.75■□□□□ 0.27
LINC00473-202ENST00000455853 MYOM1P52179 1685 aa16.75■□□□□ 0.27
LINC00473-202ENST00000455853 ADAMTS8Q9UP79 889 aa16.75■□□□□ 0.27
LINC00473-202ENST00000455853 NINLQ9Y2I6 1382 aa16.74■□□□□ 0.27
LINC00473-202ENST00000455853 HSPA2P54652 639 aa16.74■□□□□ 0.27
LINC00473-202ENST00000455853 ESF1Q9H501 851 aaKnown RBP16.74■□□□□ 0.27
LINC00473-202ENST00000455853 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.73■□□□□ 0.27
LINC00473-202ENST00000455853 LAS1LQ9Y4W2 734 aaKnown RBP16.73■□□□□ 0.27
LINC00473-202ENST00000455853 GGT6Q6P531 493 aa16.73■□□□□ 0.27
LINC00473-202ENST00000455853 TET3O43151 1660 aa16.72■□□□□ 0.27
LINC00473-202ENST00000455853 DEPDC5O75140 1603 aa16.72■□□□□ 0.27
LINC00473-202ENST00000455853 AMER1Q5JTC6 1135 aaPredicted RBP16.72■□□□□ 0.27
LINC00473-202ENST00000455853 PTPRTO14522 1441 aa16.71■□□□□ 0.27
LINC00473-202ENST00000455853 PLEKHH1Q9ULM0 1364 aa16.71■□□□□ 0.27
LINC00473-202ENST00000455853 SLFN5Q08AF3 891 aa16.7■□□□□ 0.26
LINC00473-202ENST00000455853 TRMT2AQ8IZ69 625 aaKnown RBP16.7■□□□□ 0.26
LINC00473-202ENST00000455853 NKTRP30414 1462 aaKnown RBP16.7■□□□□ 0.26
LINC00473-202ENST00000455853 CLTCL1P53675 1640 aa16.67■□□□□ 0.26
LINC00473-202ENST00000455853 KIF3BO15066 747 aa16.67■□□□□ 0.26
LINC00473-202ENST00000455853 AAMPQ13685 434 aa16.66■□□□□ 0.26
LINC00473-202ENST00000455853 GSE1Q14687 1217 aa16.66■□□□□ 0.26
LINC00473-202ENST00000455853 C20orf194Q5TEA3 1177 aa16.66■□□□□ 0.26
LINC00473-202ENST00000455853 ZMYM3Q14202 1370 aa16.66■□□□□ 0.26
LINC00473-202ENST00000455853 E9PSI1 815 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms