RNA–Protein interactions for RNA: ENST00000455362.1

HMGB1P4-201, Transcript of high mobility group box 1 pseudogene 4, humanhuman

BASIC

Gene HMGB1P4, Length 567 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P4-201ENST00000455362 TMC2Q8TDI7 906 aa7.81□□□□□ -1.16
HMGB1P4-201ENST00000455362 PCMTD1Q96MG8 357 aaPredicted RBP7.81□□□□□ -1.16
HMGB1P4-201ENST00000455362 ATP1B4Q9UN42 357 aaPredicted RBP7.81□□□□□ -1.16
HMGB1P4-201ENST00000455362 FYCO1Q9BQS8 1478 aa7.81□□□□□ -1.16
HMGB1P4-201ENST00000455362 PROSER2Q86WR7 435 aaPredicted RBP7.8□□□□□ -1.16
HMGB1P4-201ENST00000455362 MTMR7Q9Y216 660 aa7.8□□□□□ -1.16
HMGB1P4-201ENST00000455362 PCF11O94913 1555 aaKnown RBP7.8□□□□□ -1.16
HMGB1P4-201ENST00000455362 TTBK1Q5TCY1 1321 aaPredicted RBP7.79□□□□□ -1.16
HMGB1P4-201ENST00000455362 MAP3K1Q13233 1512 aa7.79□□□□□ -1.16
HMGB1P4-201ENST00000455362 KANK4Q5T7N3 995 aaPredicted RBP7.79□□□□□ -1.16
HMGB1P4-201ENST00000455362 TMEM92Q6UXU6 159 aa7.79□□□□□ -1.16
HMGB1P4-201ENST00000455362 MICALL2Q8IY33 904 aa7.79□□□□□ -1.16
HMGB1P4-201ENST00000455362 BOLA1Q9Y3E2 137 aa7.79□□□□□ -1.16
HMGB1P4-201ENST00000455362 RBM25P49756 843 aaKnown RBP7.78□□□□□ -1.16
HMGB1P4-201ENST00000455362 MFAP1P55081 439 aaKnown RBP7.78□□□□□ -1.16
HMGB1P4-201ENST00000455362 PARP9Q8IXQ6 854 aa7.78□□□□□ -1.16
HMGB1P4-201ENST00000455362 CCDC102AQ96A19 550 aa7.78□□□□□ -1.16
HMGB1P4-201ENST00000455362 L3MBTL3Q96JM7 780 aaPredicted RBP7.78□□□□□ -1.16
HMGB1P4-201ENST00000455362 GZF1Q9H116 711 aaPredicted RBP7.78□□□□□ -1.16
HMGB1P4-201ENST00000455362 EMILIN3Q9NT22 766 aa7.78□□□□□ -1.16
HMGB1P4-201ENST00000455362 ERCC6L2Q5T890 1561 aa7.78□□□□□ -1.16
HMGB1P4-201ENST00000455362 PTPRGP23470 1445 aa7.78□□□□□ -1.16
HMGB1P4-201ENST00000455362 NUTM2FA1L443 756 aa7.77□□□□□ -1.17
HMGB1P4-201ENST00000455362 DSG2Q14126 1118 aa7.77□□□□□ -1.17
HMGB1P4-201ENST00000455362 MCM6Q14566 821 aa7.77□□□□□ -1.17
HMGB1P4-201ENST00000455362 AMHR2Q16671 573 aa7.77□□□□□ -1.17
HMGB1P4-201ENST00000455362 LRRIQ1Q96JM4 1722 aa7.77□□□□□ -1.17
HMGB1P4-201ENST00000455362 TIAM1Q13009 1591 aa7.76□□□□□ -1.17
HMGB1P4-201ENST00000455362 MAP3K9P80192 1104 aa7.76□□□□□ -1.17
HMGB1P4-201ENST00000455362 FOXK1P85037 733 aa7.76□□□□□ -1.17
HMGB1P4-201ENST00000455362 MAP2K5Q13163 448 aa7.76□□□□□ -1.17
HMGB1P4-201ENST00000455362 PLB1Q6P1J6 1458 aa7.75□□□□□ -1.17
HMGB1P4-201ENST00000455362 RAPGEF6Q8TEU7 1601 aa7.75□□□□□ -1.17
HMGB1P4-201ENST00000455362 GRXCR2A6NFK2 248 aa7.75□□□□□ -1.17
HMGB1P4-201ENST00000455362 POTEMA6NI47 508 aa7.75□□□□□ -1.17
HMGB1P4-201ENST00000455362 G3V3G9 751 aa7.75□□□□□ -1.17
HMGB1P4-201ENST00000455362 TTLL12Q14166 644 aaPredicted RBP7.75□□□□□ -1.17
HMGB1P4-201ENST00000455362 LRRC9Q6ZRR7 1453 aa7.75□□□□□ -1.17
HMGB1P4-201ENST00000455362 HECW1Q76N89 1606 aa7.74□□□□□ -1.17
HMGB1P4-201ENST00000455362 EPRSP07814 1512 aaKnown RBP7.74□□□□□ -1.17
HMGB1P4-201ENST00000455362 CFAP43Q8NDM7 1665 aa7.74□□□□□ -1.17
HMGB1P4-201ENST00000455362 IRF6O14896 467 aa7.74□□□□□ -1.17
HMGB1P4-201ENST00000455362 GPR37O15354 613 aa7.74□□□□□ -1.17
HMGB1P4-201ENST00000455362 IGSF3O75054 1194 aa7.74□□□□□ -1.17
HMGB1P4-201ENST00000455362 FOXD4L5Q5VV16 416 aaPredicted RBP7.74□□□□□ -1.17
HMGB1P4-201ENST00000455362 RETREG2Q8NC44 543 aa7.74□□□□□ -1.17
HMGB1P4-201ENST00000455362 FOXD4L4Q8WXT5 416 aaPredicted RBP7.74□□□□□ -1.17
HMGB1P4-201ENST00000455362 PCGF6Q9BYE7 350 aa7.74□□□□□ -1.17
HMGB1P4-201ENST00000455362 ABCA8O94911 1581 aa7.74□□□□□ -1.17
HMGB1P4-201ENST00000455362 NUP153P49790 1475 aaKnown RBP7.74□□□□□ -1.17
HMGB1P4-201ENST00000455362 KIF3CO14782 793 aa7.73□□□□□ -1.17
HMGB1P4-201ENST00000455362 GNPATO15228 680 aa7.73□□□□□ -1.17
HMGB1P4-201ENST00000455362 CCDC18Q5T9S5 1454 aa7.73□□□□□ -1.17
HMGB1P4-201ENST00000455362 UACAQ9BZF9 1416 aa7.72□□□□□ -1.17
HMGB1P4-201ENST00000455362 FCHSD2O94868 740 aa7.72□□□□□ -1.17
HMGB1P4-201ENST00000455362 HIC1Q14526 733 aa7.72□□□□□ -1.17
HMGB1P4-201ENST00000455362 MAMSTRQ6ZN01 415 aa7.72□□□□□ -1.17
HMGB1P4-201ENST00000455362 PLPP6Q8IY26 295 aa7.72□□□□□ -1.17
HMGB1P4-201ENST00000455362 FBXW7Q969H0 707 aa7.72□□□□□ -1.17
HMGB1P4-201ENST00000455362 CDK13Q14004 1512 aaKnown RBP7.72□□□□□ -1.17
HMGB1P4-201ENST00000455362 ATP10BO94823 1461 aa7.71□□□□□ -1.18
HMGB1P4-201ENST00000455362 MTUS2Q5JR59 1369 aa7.71□□□□□ -1.18
HMGB1P4-201ENST00000455362 POTEGQ6S5H5 508 aa7.7□□□□□ -1.18
HMGB1P4-201ENST00000455362 CDK11AQ9UQ88 783 aaPredicted RBP7.7□□□□□ -1.18
HMGB1P4-201ENST00000455362 MAGI3Q5TCQ9 1506 aa7.69□□□□□ -1.18
HMGB1P4-201ENST00000455362 E9PSI1 815 aa7.69□□□□□ -1.18
HMGB1P4-201ENST00000455362 HMGB1P09429 215 aaKnown RBP7.69□□□□□ -1.18
HMGB1P4-201ENST00000455362 PDE4CQ08493 712 aa7.69□□□□□ -1.18
HMGB1P4-201ENST00000455362 FNBP4Q8N3X1 1017 aaPredicted RBP7.69□□□□□ -1.18
HMGB1P4-201ENST00000455362 SCUBE2Q9NQ36 999 aa7.69□□□□□ -1.18
HMGB1P4-201ENST00000455362 UHRF1BP1LA0JNW5 1464 aa7.68□□□□□ -1.18
HMGB1P4-201ENST00000455362 ABCC2Q92887 1545 aa7.68□□□□□ -1.18
HMGB1P4-201ENST00000455362 PLEKHD1A6NEE1 506 aa7.68□□□□□ -1.18
HMGB1P4-201ENST00000455362 TBC1D12O60347 775 aa7.68□□□□□ -1.18
HMGB1P4-201ENST00000455362 ZNF428Q96B54 188 aa7.68□□□□□ -1.18
HMGB1P4-201ENST00000455362 POM121Q96HA1 1249 aa7.68□□□□□ -1.18
HMGB1P4-201ENST00000455362 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.68□□□□□ -1.18
HMGB1P4-201ENST00000455362 PATL2C9JE40 543 aaKnown RBP7.67□□□□□ -1.18
HMGB1P4-201ENST00000455362 IRF5Q13568 498 aa7.67□□□□□ -1.18
HMGB1P4-201ENST00000455362 SH3D19Q5HYK7 790 aa7.67□□□□□ -1.18
HMGB1P4-201ENST00000455362 PCDH10Q9P2E7 1040 aa7.67□□□□□ -1.18
HMGB1P4-201ENST00000455362 ACIN1Q9UKV3 1341 aaKnown RBP7.67□□□□□ -1.18
HMGB1P4-201ENST00000455362 PHLDB1Q86UU1 1377 aa7.67□□□□□ -1.18
HMGB1P4-201ENST00000455362 ARHGEF11O15085 1522 aa7.67□□□□□ -1.18
HMGB1P4-201ENST00000455362 EHBP1L1Q8N3D4 1523 aa7.67□□□□□ -1.18
HMGB1P4-201ENST00000455362 SUPT6HQ7KZ85 1726 aaKnown RBP7.66□□□□□ -1.18
HMGB1P4-201ENST00000455362 LCE2DQ5TA82 110 aaPredicted RBP7.66□□□□□ -1.18
HMGB1P4-201ENST00000455362 GIGYF2Q6Y7W6 1299 aaKnown RBP7.66□□□□□ -1.18
HMGB1P4-201ENST00000455362 SLAIN1Q8ND83 568 aa7.66□□□□□ -1.18
HMGB1P4-201ENST00000455362 TROQ12816 1431 aaPredicted RBP7.66□□□□□ -1.18
HMGB1P4-201ENST00000455362 NCOA2Q15596 1464 aa7.66□□□□□ -1.18
HMGB1P4-201ENST00000455362 C2orf72A6NCS6 295 aa7.65□□□□□ -1.18
HMGB1P4-201ENST00000455362 MS4A1P11836 297 aa7.65□□□□□ -1.18
HMGB1P4-201ENST00000455362 OSBPP22059 807 aa7.65□□□□□ -1.18
HMGB1P4-201ENST00000455362 ADCY10Q96PN6 1610 aa7.65□□□□□ -1.18
HMGB1P4-201ENST00000455362 RRBP1Q9P2E9 1410 aaKnown RBP7.65□□□□□ -1.18
HMGB1P4-201ENST00000455362 KDM5BQ9UGL1 1544 aa7.65□□□□□ -1.18
HMGB1P4-201ENST00000455362 RIMBP3CA6NJZ7 1639 aa7.64□□□□□ -1.19
HMGB1P4-201ENST00000455362 RIMBP3BA6NNM3 1639 aa7.64□□□□□ -1.19
HMGB1P4-201ENST00000455362 RIMBP3Q9UFD9 1639 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms