RNA–Protein interactions for RNA: ENST00000452660.5

LRCH3-209, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 681 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-209ENST00000452660 HIC1Q14526 733 aa6.91□□□□□ -1.3
LRCH3-209ENST00000452660 KMT5BQ4FZB7 885 aa6.91□□□□□ -1.3
LRCH3-209ENST00000452660 ZNF516Q92618 1163 aa6.91□□□□□ -1.3
LRCH3-209ENST00000452660 PRKD2Q9BZL6 878 aa6.91□□□□□ -1.3
LRCH3-209ENST00000452660 PCDHB3Q9Y5E6 796 aa6.91□□□□□ -1.3
LRCH3-209ENST00000452660 Q6ZNB5 142 aa6.9□□□□□ -1.3
LRCH3-209ENST00000452660 NUTM2FA1L443 756 aa6.89□□□□□ -1.31
LRCH3-209ENST00000452660 RCCD1A6NED2 376 aa6.89□□□□□ -1.31
LRCH3-209ENST00000452660 RSPH4AQ5TD94 716 aa6.89□□□□□ -1.31
LRCH3-209ENST00000452660 TESPA1A2RU30 521 aaPredicted RBP6.88□□□□□ -1.31
LRCH3-209ENST00000452660 GFRA3O60609 400 aa6.88□□□□□ -1.31
LRCH3-209ENST00000452660 PLCB2Q00722 1185 aa6.88□□□□□ -1.31
LRCH3-209ENST00000452660 PXYLP1Q8TE99 480 aa6.88□□□□□ -1.31
LRCH3-209ENST00000452660 COPS2P61201 443 aa6.87□□□□□ -1.31
LRCH3-209ENST00000452660 SEMA3EO15041 775 aa6.86□□□□□ -1.31
LRCH3-209ENST00000452660 ANKLE1Q8NAG6 615 aa6.86□□□□□ -1.31
LRCH3-209ENST00000452660 NKX2-3Q8TAU0 364 aa6.86□□□□□ -1.31
LRCH3-209ENST00000452660 NR1I2O75469 434 aa6.85□□□□□ -1.31
LRCH3-209ENST00000452660 TRAF7Q6Q0C0 670 aa6.85□□□□□ -1.31
LRCH3-209ENST00000452660 BLOC1S3Q6QNY0 202 aa6.85□□□□□ -1.31
LRCH3-209ENST00000452660 CFHP08603 1231 aa6.84□□□□□ -1.31
LRCH3-209ENST00000452660 METTL3Q86U44 580 aaKnown RBP6.84□□□□□ -1.31
LRCH3-209ENST00000452660 GNPATO15228 680 aa6.83□□□□□ -1.32
LRCH3-209ENST00000452660 SLC10A3P09131 477 aa6.83□□□□□ -1.32
LRCH3-209ENST00000452660 RNF223E7ERA6 249 aa6.82□□□□□ -1.32
LRCH3-209ENST00000452660 ADH1BP00325 375 aa6.82□□□□□ -1.32
LRCH3-209ENST00000452660 PRR20EP86478 221 aa6.82□□□□□ -1.32
LRCH3-209ENST00000452660 PRR20CP86479 221 aa6.82□□□□□ -1.32
LRCH3-209ENST00000452660 PRR20DP86480 221 aa6.82□□□□□ -1.32
LRCH3-209ENST00000452660 PRR20BP86481 221 aa6.82□□□□□ -1.32
LRCH3-209ENST00000452660 PRR20AP86496 221 aa6.82□□□□□ -1.32
LRCH3-209ENST00000452660 DAXXQ9UER7 740 aaPredicted RBP6.81□□□□□ -1.32
LRCH3-209ENST00000452660 GPR37O15354 613 aa6.8□□□□□ -1.32
LRCH3-209ENST00000452660 SLC19A1P41440 591 aa6.8□□□□□ -1.32
LRCH3-209ENST00000452660 ZNF598Q86UK7 904 aaKnown RBP6.8□□□□□ -1.32
LRCH3-209ENST00000452660 PDZRN3Q9UPQ7 1066 aa6.8□□□□□ -1.32
LRCH3-209ENST00000452660 LCE2BO14633 110 aa6.79□□□□□ -1.32
LRCH3-209ENST00000452660 SPRYD7Q5W111 196 aa6.79□□□□□ -1.32
LRCH3-209ENST00000452660 LMOD2Q6P5Q4 547 aa6.79□□□□□ -1.32
LRCH3-209ENST00000452660 SULF1Q8IWU6 871 aa6.79□□□□□ -1.32
LRCH3-209ENST00000452660 SALL2Q9Y467 1007 aaPredicted RBP6.79□□□□□ -1.32
LRCH3-209ENST00000452660 RBM26Q5T8P6 1007 aaKnown RBP6.78□□□□□ -1.32
LRCH3-209ENST00000452660 SLC6A16Q9GZN6 736 aa6.78□□□□□ -1.32
LRCH3-209ENST00000452660 DGAT1O75907 488 aa6.77□□□□□ -1.33
LRCH3-209ENST00000452660 FAM161AQ3B820 660 aa6.77□□□□□ -1.33
LRCH3-209ENST00000452660 SCUBE3Q8IX30 993 aa6.77□□□□□ -1.33
LRCH3-209ENST00000452660 TLL1O43897 1013 aa6.76□□□□□ -1.33
LRCH3-209ENST00000452660 S1PR4O95977 384 aa6.76□□□□□ -1.33
LRCH3-209ENST00000452660 EMID1Q96A84 441 aaPredicted RBP6.76□□□□□ -1.33
LRCH3-209ENST00000452660 TRIM67Q6ZTA4 783 aa6.75□□□□□ -1.33
LRCH3-209ENST00000452660 ATP6V1AP38606 617 aa6.74□□□□□ -1.33
LRCH3-209ENST00000452660 GCGRP47871 477 aa6.74□□□□□ -1.33
LRCH3-209ENST00000452660 RPIAP49247 311 aa6.74□□□□□ -1.33
LRCH3-209ENST00000452660 GRIPAP1Q4V328 841 aa6.74□□□□□ -1.33
LRCH3-209ENST00000452660 MORN1Q5T089 497 aa6.74□□□□□ -1.33
LRCH3-209ENST00000452660 SPSB2Q99619 263 aa6.74□□□□□ -1.33
LRCH3-209ENST00000452660 LIAT1Q6ZQX7 453 aa6.73□□□□□ -1.33
LRCH3-209ENST00000452660 GPIHBP1Q8IV16 184 aa6.73□□□□□ -1.33
LRCH3-209ENST00000452660 THAP11Q96EK4 314 aa6.73□□□□□ -1.33
LRCH3-209ENST00000452660 TULP1O00294 542 aaPredicted RBP6.72□□□□□ -1.33
LRCH3-209ENST00000452660 GDF9O60383 454 aa6.72□□□□□ -1.33
LRCH3-209ENST00000452660 FECHP22830 423 aa6.72□□□□□ -1.33
LRCH3-209ENST00000452660 ZNF697Q5TEC3 545 aa6.72□□□□□ -1.33
LRCH3-209ENST00000452660 FMNL1O95466 1100 aaPredicted RBP6.71□□□□□ -1.34
LRCH3-209ENST00000452660 MSS51Q4VC12 460 aa6.71□□□□□ -1.34
LRCH3-209ENST00000452660 RDH13Q8NBN7 331 aa6.71□□□□□ -1.34
LRCH3-209ENST00000452660 MAP2K5Q13163 448 aa6.7□□□□□ -1.34
LRCH3-209ENST00000452660 PKDCCQ504Y2 493 aa6.7□□□□□ -1.34
LRCH3-209ENST00000452660 VSIG10Q8N0Z9 540 aa6.7□□□□□ -1.34
LRCH3-209ENST00000452660 DDX11L8A8MPP1 907 aa6.69□□□□□ -1.34
LRCH3-209ENST00000452660 PPEF1O14829 653 aaPredicted RBP6.69□□□□□ -1.34
LRCH3-209ENST00000452660 FUT2Q10981 343 aa6.69□□□□□ -1.34
LRCH3-209ENST00000452660 Q3C1V9 767 aa6.69□□□□□ -1.34
LRCH3-209ENST00000452660 PUS10Q3MIT2 529 aaKnown RBP6.69□□□□□ -1.34
LRCH3-209ENST00000452660 BRICD5Q6PL45 260 aa6.69□□□□□ -1.34
LRCH3-209ENST00000452660 CD2BP2O95400 341 aaKnown RBP6.68□□□□□ -1.34
LRCH3-209ENST00000452660 ZNF787Q6DD87 383 aa6.68□□□□□ -1.34
LRCH3-209ENST00000452660 PHOX2BQ99453 314 aa6.68□□□□□ -1.34
LRCH3-209ENST00000452660 MINK1Q8N4C8 1332 aaPredicted RBP6.68□□□□□ -1.34
LRCH3-209ENST00000452660 HAP1P54257 671 aaPredicted RBP6.67□□□□□ -1.34
LRCH3-209ENST00000452660 USP46P62068 366 aa6.67□□□□□ -1.34
LRCH3-209ENST00000452660 MYT1Q01538 1121 aa6.67□□□□□ -1.34
LRCH3-209ENST00000452660 PLA2G2CQ5R387 149 aa6.67□□□□□ -1.34
LRCH3-209ENST00000452660 CRIPAKQ8N1N5 446 aa6.67□□□□□ -1.34
LRCH3-209ENST00000452660 KDM2AQ9Y2K7 1162 aa6.67□□□□□ -1.34
LRCH3-209ENST00000452660 SLC27A5Q9Y2P5 690 aa6.67□□□□□ -1.34
LRCH3-209ENST00000452660 CD46P15529 392 aa6.66□□□□□ -1.34
LRCH3-209ENST00000452660 FAM160A2Q8N612 972 aaPredicted RBP6.66□□□□□ -1.34
LRCH3-209ENST00000452660 IRF6O14896 467 aa6.65□□□□□ -1.34
LRCH3-209ENST00000452660 AVPP01185 164 aa6.65□□□□□ -1.34
LRCH3-209ENST00000452660 PKD2L1Q9P0L9 805 aa6.65□□□□□ -1.34
LRCH3-209ENST00000452660 MMP16P51512 607 aa6.64□□□□□ -1.35
LRCH3-209ENST00000452660 FCF1Q9Y324 198 aaKnown RBP6.64□□□□□ -1.35
LRCH3-209ENST00000452660 FAM187AA6NFU0 413 aa6.63□□□□□ -1.35
LRCH3-209ENST00000452660 TOR4AQ9NXH8 423 aa6.63□□□□□ -1.35
LRCH3-209ENST00000452660 ZBTB24O43167 697 aaPredicted RBP6.62□□□□□ -1.35
LRCH3-209ENST00000452660 KDM4AO75164 1064 aa6.62□□□□□ -1.35
LRCH3-209ENST00000452660 CTC1Q2NKJ3 1217 aa6.62□□□□□ -1.35
LRCH3-209ENST00000452660 TNFRSF10AO00220 468 aa6.61□□□□□ -1.35
LRCH3-209ENST00000452660 CLCN1P35523 988 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms