RNA–Protein interactions for RNA: ENST00000451980.3

LINC01548-201, Transcript of long intergenic non-protein coding RNA 1548, humanhuman

TSL 5 BASIC

Gene LINC01548, Length 696 nt, Biotype lincRNA, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01548-201ENST00000451980 CFDP1Q9UEE9 299 aaPredicted RBP12.62□□□□□ -0.39
LINC01548-201ENST00000451980 KIF13AQ9H1H9 1805 aa12.62□□□□□ -0.39
LINC01548-201ENST00000451980 ARHGEF12Q9NZN5 1544 aa12.62□□□□□ -0.39
LINC01548-201ENST00000451980 ABCC5O15440 1437 aa12.62□□□□□ -0.39
LINC01548-201ENST00000451980 CROCC2H7BZ55 1655 aa12.61□□□□□ -0.39
LINC01548-201ENST00000451980 MBD5Q9P267 1494 aa12.61□□□□□ -0.39
LINC01548-201ENST00000451980 MAP3K4Q9Y6R4 1608 aa12.61□□□□□ -0.39
LINC01548-201ENST00000451980 ARHGAP5Q13017 1502 aa12.6□□□□□ -0.39
LINC01548-201ENST00000451980 PPRC1Q5VV67 1664 aaKnown RBP12.59□□□□□ -0.39
LINC01548-201ENST00000451980 DAPK1P53355 1430 aa12.59□□□□□ -0.39
LINC01548-201ENST00000451980 ARHGEF5Q12774 1597 aa12.59□□□□□ -0.39
LINC01548-201ENST00000451980 ABCC1P33527 1531 aa12.58□□□□□ -0.4
LINC01548-201ENST00000451980 VGFO15240 615 aaPredicted RBP12.58□□□□□ -0.4
LINC01548-201ENST00000451980 ARSIQ5FYB1 569 aa12.58□□□□□ -0.4
LINC01548-201ENST00000451980 PHF8Q9UPP1 1060 aa12.58□□□□□ -0.4
LINC01548-201ENST00000451980 SYCP2Q9BX26 1530 aa12.57□□□□□ -0.4
LINC01548-201ENST00000451980 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.57□□□□□ -0.4
LINC01548-201ENST00000451980 ITGAEP38570 1179 aa12.57□□□□□ -0.4
LINC01548-201ENST00000451980 ZFP91Q96JP5 570 aaPredicted RBP12.57□□□□□ -0.4
LINC01548-201ENST00000451980 ZNF316A6NFI3 1004 aaPredicted RBP12.56□□□□□ -0.4
LINC01548-201ENST00000451980 ZNF777Q9ULD5 760 aaPredicted RBP12.56□□□□□ -0.4
LINC01548-201ENST00000451980 GCC2Q8IWJ2 1684 aa12.54□□□□□ -0.4
LINC01548-201ENST00000451980 ADGBQ8N7X0 1667 aa12.54□□□□□ -0.4
LINC01548-201ENST00000451980 CD109Q6YHK3 1445 aa12.54□□□□□ -0.4
LINC01548-201ENST00000451980 AKNAQ7Z591 1439 aa12.54□□□□□ -0.4
LINC01548-201ENST00000451980 KIAA1107Q9UPP5 1409 aa12.54□□□□□ -0.4
LINC01548-201ENST00000451980 FANCAO15360 1455 aa12.54□□□□□ -0.4
LINC01548-201ENST00000451980 HNRNPMP52272 730 aaKnown RBP eCLIP12.54□□□□□ -0.4
LINC01548-201ENST00000451980 ANKRD13DQ6ZTN6 518 aa12.54□□□□□ -0.4
LINC01548-201ENST00000451980 RNF25Q96BH1 459 aaPredicted RBP12.54□□□□□ -0.4
LINC01548-201ENST00000451980 KDM6BO15054 1643 aa12.54□□□□□ -0.4
LINC01548-201ENST00000451980 TRAPPC8Q9Y2L5 1435 aa12.54□□□□□ -0.4
LINC01548-201ENST00000451980 EFCAB2Q5VUJ9 269 aa12.53□□□□□ -0.4
LINC01548-201ENST00000451980 HFM1A2PYH4 1435 aa12.53□□□□□ -0.4
LINC01548-201ENST00000451980 NAIPQ13075 1403 aa12.53□□□□□ -0.4
LINC01548-201ENST00000451980 TSPOAP1O95153 1857 aa12.53□□□□□ -0.4
LINC01548-201ENST00000451980 ADGRL2O95490 1459 aa12.53□□□□□ -0.4
LINC01548-201ENST00000451980 SHANK2Q9UPX8 1470 aa12.53□□□□□ -0.4
LINC01548-201ENST00000451980 MAST1Q9Y2H9 1570 aa12.52□□□□□ -0.4
LINC01548-201ENST00000451980 CCDC141Q6ZP82 1450 aa12.52□□□□□ -0.41
LINC01548-201ENST00000451980 PLEKHH2Q8IVE3 1493 aa12.52□□□□□ -0.41
LINC01548-201ENST00000451980 NLRP6P59044 892 aa12.51□□□□□ -0.41
LINC01548-201ENST00000451980 LSM11P83369 360 aaKnown RBP eCLIP12.51□□□□□ -0.41
LINC01548-201ENST00000451980 FAM69CQ0P6D2 419 aa12.5□□□□□ -0.41
LINC01548-201ENST00000451980 CHIC2Q9UKJ5 165 aa12.5□□□□□ -0.41
LINC01548-201ENST00000451980 ROCK1Q13464 1354 aa12.5□□□□□ -0.41
LINC01548-201ENST00000451980 NCOA1Q15788 1441 aa12.5□□□□□ -0.41
LINC01548-201ENST00000451980 SETD5Q9C0A6 1442 aa12.5□□□□□ -0.41
LINC01548-201ENST00000451980 CFAP74Q9C0B2 1584 aa12.49□□□□□ -0.41
LINC01548-201ENST00000451980 C9orf84Q5VXU9 1444 aa12.49□□□□□ -0.41
LINC01548-201ENST00000451980 RAB3GAP2Q9H2M9 1393 aa12.49□□□□□ -0.41
LINC01548-201ENST00000451980 ADGRL1O94910 1474 aa12.48□□□□□ -0.41
LINC01548-201ENST00000451980 NEO1Q92859 1461 aa12.48□□□□□ -0.41
LINC01548-201ENST00000451980 SCAPERQ9BY12 1400 aa12.47□□□□□ -0.41
LINC01548-201ENST00000451980 PBX2P40425 430 aa12.47□□□□□ -0.41
LINC01548-201ENST00000451980 KHSRPQ92945 711 aaKnown RBP eCLIP12.47□□□□□ -0.41
LINC01548-201ENST00000451980 RRP7BPQ9NSQ0 103 aa12.47□□□□□ -0.41
LINC01548-201ENST00000451980 RICTORQ6R327 1708 aa12.47□□□□□ -0.41
LINC01548-201ENST00000451980 FRMPD1Q5SYB0 1578 aa12.47□□□□□ -0.41
LINC01548-201ENST00000451980 INO80Q9ULG1 1556 aaPredicted RBP12.47□□□□□ -0.41
LINC01548-201ENST00000451980 FBXO22Q8NEZ5 403 aa12.46□□□□□ -0.41
LINC01548-201ENST00000451980 PLXNC1O60486 1568 aa12.46□□□□□ -0.42
LINC01548-201ENST00000451980 KDM5CP41229 1560 aa12.46□□□□□ -0.42
LINC01548-201ENST00000451980 KIDINS220Q9ULH0 1771 aa12.46□□□□□ -0.42
LINC01548-201ENST00000451980 AFAP1Q8N556 730 aa12.45□□□□□ -0.42
LINC01548-201ENST00000451980 ZFYVE16Q7Z3T8 1539 aa12.45□□□□□ -0.42
LINC01548-201ENST00000451980 RSPH4AQ5TD94 716 aa12.44□□□□□ -0.42
LINC01548-201ENST00000451980 TAOK2Q9UL54 1235 aa12.44□□□□□ -0.42
LINC01548-201ENST00000451980 POGZQ7Z3K3 1410 aa12.44□□□□□ -0.42
LINC01548-201ENST00000451980 DHX57Q6P158 1386 aaKnown RBP12.43□□□□□ -0.42
LINC01548-201ENST00000451980 COL17A1Q9UMD9 1497 aaPredicted RBP12.43□□□□□ -0.42
LINC01548-201ENST00000451980 HRCP23327 699 aa12.43□□□□□ -0.42
LINC01548-201ENST00000451980 DENND4BO75064 1496 aaPredicted RBP12.42□□□□□ -0.42
LINC01548-201ENST00000451980 KIF3CO14782 793 aa12.42□□□□□ -0.42
LINC01548-201ENST00000451980 ATP7AQ04656 1500 aa12.42□□□□□ -0.42
LINC01548-201ENST00000451980 RTEL1-TNFRSF6BF6WH68 1400 aa12.41□□□□□ -0.42
LINC01548-201ENST00000451980 ANKRD30AQ9BXX3 1397 aa12.41□□□□□ -0.42
LINC01548-201ENST00000451980 KIF15Q9NS87 1388 aa12.4□□□□□ -0.42
LINC01548-201ENST00000451980 ZNF518AQ6AHZ1 1483 aa12.4□□□□□ -0.43
LINC01548-201ENST00000451980 TSPY4P0CV99 314 aa12.39□□□□□ -0.43
LINC01548-201ENST00000451980 TSPY10P0CW01 314 aa12.39□□□□□ -0.43
LINC01548-201ENST00000451980 MLH3Q9UHC1 1453 aa12.39□□□□□ -0.43
LINC01548-201ENST00000451980 ABCA6Q8N139 1617 aa12.38□□□□□ -0.43
LINC01548-201ENST00000451980 SLC34A2O95436 690 aa12.38□□□□□ -0.43
LINC01548-201ENST00000451980 BCL11BQ9C0K0 894 aaPredicted RBP12.38□□□□□ -0.43
LINC01548-201ENST00000451980 TEX14Q8IWB6 1497 aa12.38□□□□□ -0.43
LINC01548-201ENST00000451980 HECW2Q9P2P5 1572 aa12.38□□□□□ -0.43
LINC01548-201ENST00000451980 SPAG9O60271 1321 aaKnown RBP12.37□□□□□ -0.43
LINC01548-201ENST00000451980 ANKRD50Q9ULJ7 1429 aa12.37□□□□□ -0.43
LINC01548-201ENST00000451980 ZMYM4Q5VZL5 1548 aa12.37□□□□□ -0.43
LINC01548-201ENST00000451980 C2orf72A6NCS6 295 aa12.37□□□□□ -0.43
LINC01548-201ENST00000451980 RAPGEF3O95398 923 aa12.37□□□□□ -0.43
LINC01548-201ENST00000451980 NUDT7P0C024 238 aa12.37□□□□□ -0.43
LINC01548-201ENST00000451980 DUOX2Q9NRD8 1548 aa12.37□□□□□ -0.43
LINC01548-201ENST00000451980 PZPP20742 1482 aa12.36□□□□□ -0.43
LINC01548-201ENST00000451980 UNC13BO14795 1591 aa12.35□□□□□ -0.43
LINC01548-201ENST00000451980 DIP2CQ9Y2E4 1556 aa12.35□□□□□ -0.43
LINC01548-201ENST00000451980 MFRPQ9BY79 579 aa12.35□□□□□ -0.43
LINC01548-201ENST00000451980 LHX6Q9UPM6 363 aa12.35□□□□□ -0.43
LINC01548-201ENST00000451980 KDM5DQ9BY66 1539 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms