RNA–Protein interactions for RNA: ENST00000439160.6

TCOF1-205, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,644 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-205ENST00000439160 HSCBQ8IWL3 235 aa15.52■□□□□ 0.07
TCOF1-205ENST00000439160 FGD1P98174 961 aa15.52■□□□□ 0.07
TCOF1-205ENST00000439160 TXNDC2Q86VQ3 553 aa15.51■□□□□ 0.07
TCOF1-205ENST00000439160 PPP2R1AP30153 589 aa15.5■□□□□ 0.07
TCOF1-205ENST00000439160 RUNDC1Q96C34 613 aa15.5■□□□□ 0.07
TCOF1-205ENST00000439160 CDCA7LQ96GN5 454 aa15.5■□□□□ 0.07
TCOF1-205ENST00000439160 SLC52A1Q9NWF4 448 aa15.5■□□□□ 0.07
TCOF1-205ENST00000439160 BRD4O60885 1362 aaPredicted RBP15.5■□□□□ 0.07
TCOF1-205ENST00000439160 ZKSCAN2Q63HK3 967 aa15.5■□□□□ 0.07
TCOF1-205ENST00000439160 C11orf95C9JLR9 678 aaPredicted RBP15.49■□□□□ 0.07
TCOF1-205ENST00000439160 PSME1Q06323 249 aa15.49■□□□□ 0.07
TCOF1-205ENST00000439160 NUTM2GQ5VZR2 741 aa15.49■□□□□ 0.07
TCOF1-205ENST00000439160 AKNAQ7Z591 1439 aa15.49■□□□□ 0.07
TCOF1-205ENST00000439160 THOC2Q8NI27 1593 aaKnown RBP15.48■□□□□ 0.07
TCOF1-205ENST00000439160 MFAP1P55081 439 aaKnown RBP15.48■□□□□ 0.07
TCOF1-205ENST00000439160 CCDC9Q9Y3X0 531 aaKnown RBP15.48■□□□□ 0.07
TCOF1-205ENST00000439160 CD109Q6YHK3 1445 aa15.48■□□□□ 0.07
TCOF1-205ENST00000439160 CHMP4AQ9BY43 222 aa15.47■□□□□ 0.07
TCOF1-205ENST00000439160 NAP1L2Q9ULW6 460 aaPredicted RBP15.47■□□□□ 0.07
TCOF1-205ENST00000439160 ERBINQ96RT1 1412 aa15.47■□□□□ 0.07
TCOF1-205ENST00000439160 SLKQ9H2G2 1235 aaPredicted RBP15.47■□□□□ 0.07
TCOF1-205ENST00000439160 HMMRO75330 724 aa15.45■□□□□ 0.06
TCOF1-205ENST00000439160 TCP11L2Q8N4U5 519 aa15.45■□□□□ 0.06
TCOF1-205ENST00000439160 NGEFQ8N5V2 710 aa15.45■□□□□ 0.06
TCOF1-205ENST00000439160 PTPRKQ15262 1439 aa15.45■□□□□ 0.06
TCOF1-205ENST00000439160 TEFQ10587 303 aa15.45■□□□□ 0.06
TCOF1-205ENST00000439160 CENPQQ7L2Z9 268 aaPredicted RBP15.45■□□□□ 0.06
TCOF1-205ENST00000439160 PNISRQ8TF01 805 aaKnown RBP15.45■□□□□ 0.06
TCOF1-205ENST00000439160 KIF14Q15058 1648 aa15.44■□□□□ 0.06
TCOF1-205ENST00000439160 SLC26A8Q96RN1 970 aa15.44■□□□□ 0.06
TCOF1-205ENST00000439160 NLRP6P59044 892 aa15.44■□□□□ 0.06
TCOF1-205ENST00000439160 CABP1Q9NZU7 370 aa15.44■□□□□ 0.06
TCOF1-205ENST00000439160 MCCP23508 829 aa15.44■□□□□ 0.06
TCOF1-205ENST00000439160 NECTIN2Q92692 538 aa15.44■□□□□ 0.06
TCOF1-205ENST00000439160 CHMP3Q9Y3E7 222 aa15.44■□□□□ 0.06
TCOF1-205ENST00000439160 GPATCH8Q9UKJ3 1502 aaKnown RBP15.43■□□□□ 0.06
TCOF1-205ENST00000439160 ADGRL1O94910 1474 aa15.42■□□□□ 0.06
TCOF1-205ENST00000439160 TRIM44Q96DX7 344 aaPredicted RBP15.42■□□□□ 0.06
TCOF1-205ENST00000439160 C1orf141Q5JVX7 400 aa15.42■□□□□ 0.06
TCOF1-205ENST00000439160 CDK19Q9BWU1 502 aa15.42■□□□□ 0.06
TCOF1-205ENST00000439160 KIAA1211Q6ZU35 1233 aa15.42■□□□□ 0.06
TCOF1-205ENST00000439160 TRIM6-TRIM34B2RNG4 842 aa15.41■□□□□ 0.06
TCOF1-205ENST00000439160 EIF2S2P20042 333 aaKnown RBP15.41■□□□□ 0.06
TCOF1-205ENST00000439160 PDE4AP27815 886 aa15.41■□□□□ 0.06
TCOF1-205ENST00000439160 DZIP1LQ8IYY4 767 aaKnown RBP15.4■□□□□ 0.06
TCOF1-205ENST00000439160 CFAP44Q96MT7 982 aa15.4■□□□□ 0.06
TCOF1-205ENST00000439160 ATP10BO94823 1461 aa15.4■□□□□ 0.06
TCOF1-205ENST00000439160 ANKRD45Q5TZF3 282 aa15.4■□□□□ 0.06
TCOF1-205ENST00000439160 IPO9Q96P70 1041 aaKnown RBP15.4■□□□□ 0.06
TCOF1-205ENST00000439160 NUP153P49790 1475 aaKnown RBP15.39■□□□□ 0.05
TCOF1-205ENST00000439160 PANK1Q8TE04 598 aa15.39■□□□□ 0.05
TCOF1-205ENST00000439160 RPGRIP1LQ68CZ1 1315 aa15.38■□□□□ 0.05
TCOF1-205ENST00000439160 PRKAR2BP31323 418 aa15.37■□□□□ 0.05
TCOF1-205ENST00000439160 THEMISQ8N1K5 641 aaPredicted RBP15.37■□□□□ 0.05
TCOF1-205ENST00000439160 FBXO31Q5XUX0 539 aaPredicted RBP15.37■□□□□ 0.05
TCOF1-205ENST00000439160 ADGRF5Q8IZF2 1346 aa15.37■□□□□ 0.05
TCOF1-205ENST00000439160 DDX19BQ9UMR2 479 aa15.37■□□□□ 0.05
TCOF1-205ENST00000439160 GNAI1P63096 354 aa15.36■□□□□ 0.05
TCOF1-205ENST00000439160 HDAC5Q9UQL6 1122 aa15.36■□□□□ 0.05
TCOF1-205ENST00000439160 EVA1CP58658 441 aa15.36■□□□□ 0.05
TCOF1-205ENST00000439160 ZRSR1Q15695 479 aaKnown RBP15.36■□□□□ 0.05
TCOF1-205ENST00000439160 ABTB2Q8N961 1025 aa15.36■□□□□ 0.05
TCOF1-205ENST00000439160 ATF3P18847 181 aa15.36■□□□□ 0.05
TCOF1-205ENST00000439160 IDI1Q13907 227 aa15.36■□□□□ 0.05
TCOF1-205ENST00000439160 FANCAO15360 1455 aa15.35■□□□□ 0.05
TCOF1-205ENST00000439160 RPRD2Q5VT52 1461 aaKnown RBP15.35■□□□□ 0.05
TCOF1-205ENST00000439160 PLCB2Q00722 1185 aa15.35■□□□□ 0.05
TCOF1-205ENST00000439160 FAM161AQ3B820 660 aa15.35■□□□□ 0.05
TCOF1-205ENST00000439160 ESCO1Q5FWF5 840 aa15.34■□□□□ 0.05
TCOF1-205ENST00000439160 TSPYL4Q9UJ04 414 aa15.34■□□□□ 0.05
TCOF1-205ENST00000439160 GORABQ5T7V8 394 aa15.34■□□□□ 0.05
TCOF1-205ENST00000439160 PTMAP06454 111 aaKnown RBP15.34■□□□□ 0.05
TCOF1-205ENST00000439160 TAF7LQ5H9L4 462 aa15.34■□□□□ 0.05
TCOF1-205ENST00000439160 SLC4A3P48751 1232 aa15.33■□□□□ 0.05
TCOF1-205ENST00000439160 FKBP5Q13451 457 aaPredicted RBP15.33■□□□□ 0.05
TCOF1-205ENST00000439160 WAPLQ7Z5K2 1190 aa15.33■□□□□ 0.05
TCOF1-205ENST00000439160 UGGT2Q9NYU1 1516 aa15.33■□□□□ 0.04
TCOF1-205ENST00000439160 API5Q9BZZ5 524 aaKnown RBP15.33■□□□□ 0.04
TCOF1-205ENST00000439160 RAPGEF6Q8TEU7 1601 aa15.33■□□□□ 0.04
TCOF1-205ENST00000439160 PROSER2Q86WR7 435 aaPredicted RBP15.32■□□□□ 0.04
TCOF1-205ENST00000439160 TSR2Q969E8 191 aaKnown RBP15.32■□□□□ 0.04
TCOF1-205ENST00000439160 NLRP2Q9NX02 1062 aa15.32■□□□□ 0.04
TCOF1-205ENST00000439160 FOXD4L1Q9NU39 408 aa15.31■□□□□ 0.04
TCOF1-205ENST00000439160 EXOSC9Q06265 439 aaKnown RBP15.31■□□□□ 0.04
TCOF1-205ENST00000439160 RTEL1-TNFRSF6BF6WH68 1400 aa15.31■□□□□ 0.04
TCOF1-205ENST00000439160 TTC5Q8N0Z6 440 aa15.31■□□□□ 0.04
TCOF1-205ENST00000439160 KIF16BQ96L93 1317 aa15.31■□□□□ 0.04
TCOF1-205ENST00000439160 NOL8Q76FK4 1167 aaKnown RBP15.31■□□□□ 0.04
TCOF1-205ENST00000439160 GOLGA6L4A6NEF3 574 aa15.3■□□□□ 0.04
TCOF1-205ENST00000439160 GPATCH3Q96I76 525 aa15.3■□□□□ 0.04
TCOF1-205ENST00000439160 RAPGEF4Q8WZA2 1011 aa15.3■□□□□ 0.04
TCOF1-205ENST00000439160 BCAR3O75815 825 aa15.29■□□□□ 0.04
TCOF1-205ENST00000439160 GZF1Q9H116 711 aaPredicted RBP15.29■□□□□ 0.04
TCOF1-205ENST00000439160 SULT6B1Q6IMI4 303 aa15.29■□□□□ 0.04
TCOF1-205ENST00000439160 RILPL2Q969X0 211 aa15.29■□□□□ 0.04
TCOF1-205ENST00000439160 ADAMTS12P58397 1594 aa15.29■□□□□ 0.04
TCOF1-205ENST00000439160 C9orf78Q9NZ63 289 aaPredicted RBP15.29■□□□□ 0.04
TCOF1-205ENST00000439160 CEBPAP49715 358 aaPredicted RBP15.28■□□□□ 0.04
TCOF1-205ENST00000439160 RRS1Q15050 365 aaKnown RBP15.28■□□□□ 0.04
TCOF1-205ENST00000439160 ZNF692Q9BU19 519 aaPredicted RBP15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms