RNA–Protein interactions for RNA: ENST00000436786.1

LINC01239-202, Transcript of long intergenic non-protein coding RNA 1239, humanhuman

TSL 2 BASIC

Gene LINC01239, Length 2,347 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01239-202ENST00000436786 IQSEC2Q5JU85 1478 aa7.04□□□□□ -1.28
LINC01239-202ENST00000436786 CCDC141Q6ZP82 1450 aa7.04□□□□□ -1.28
LINC01239-202ENST00000436786 IER5LQ5T953 404 aa7.04□□□□□ -1.28
LINC01239-202ENST00000436786 ILDR2Q71H61 639 aa7.04□□□□□ -1.28
LINC01239-202ENST00000436786 A2ML1A8K2U0 1454 aa7.04□□□□□ -1.28
LINC01239-202ENST00000436786 WASHC2CQ9Y4E1 1318 aa7.03□□□□□ -1.28
LINC01239-202ENST00000436786 POTEFA5A3E0 1075 aa7.03□□□□□ -1.28
LINC01239-202ENST00000436786 UBAP1LF5GYI3 381 aa7.03□□□□□ -1.28
LINC01239-202ENST00000436786 TSPY4P0CV99 314 aa7.03□□□□□ -1.28
LINC01239-202ENST00000436786 TSPY10P0CW01 314 aa7.03□□□□□ -1.28
LINC01239-202ENST00000436786 TNRQ92752 1358 aa7.03□□□□□ -1.28
LINC01239-202ENST00000436786 DNMT1P26358 1616 aaKnown RBP7.02□□□□□ -1.29
LINC01239-202ENST00000436786 PZPP20742 1482 aa7.02□□□□□ -1.29
LINC01239-202ENST00000436786 LRRC9Q6ZRR7 1453 aa7.02□□□□□ -1.29
LINC01239-202ENST00000436786 KDM5DQ9BY66 1539 aa7.01□□□□□ -1.29
LINC01239-202ENST00000436786 ARHGEF5Q12774 1597 aa7.01□□□□□ -1.29
LINC01239-202ENST00000436786 KANK4Q5T7N3 995 aaPredicted RBP7.01□□□□□ -1.29
LINC01239-202ENST00000436786 VPS8Q8N3P4 1428 aa7.01□□□□□ -1.29
LINC01239-202ENST00000436786 MIA2Q96PC5 1412 aa7.01□□□□□ -1.29
LINC01239-202ENST00000436786 BMP2KQ9NSY1 1161 aaPredicted RBP7□□□□□ -1.29
LINC01239-202ENST00000436786 ANKLE2Q86XL3 938 aa7□□□□□ -1.29
LINC01239-202ENST00000436786 THEMISQ8N1K5 641 aaPredicted RBP7□□□□□ -1.29
LINC01239-202ENST00000436786 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7□□□□□ -1.29
LINC01239-202ENST00000436786 FAM135AQ9P2D6 1515 aa7□□□□□ -1.29
LINC01239-202ENST00000436786 SPATA31D1Q6ZQQ2 1576 aa7□□□□□ -1.29
LINC01239-202ENST00000436786 NEURL4Q96JN8 1562 aa6.99□□□□□ -1.29
LINC01239-202ENST00000436786 SOCS7O14512 581 aa6.99□□□□□ -1.29
LINC01239-202ENST00000436786 NLRP1Q9C000 1473 aa6.98□□□□□ -1.29
LINC01239-202ENST00000436786 MAST1Q9Y2H9 1570 aa6.98□□□□□ -1.29
LINC01239-202ENST00000436786 SHANK2Q9UPX8 1470 aa6.98□□□□□ -1.29
LINC01239-202ENST00000436786 UGGT1Q9NYU2 1555 aa6.97□□□□□ -1.29
LINC01239-202ENST00000436786 ABCC3O15438 1527 aa6.97□□□□□ -1.29
LINC01239-202ENST00000436786 MAP3K1Q13233 1512 aa6.97□□□□□ -1.29
LINC01239-202ENST00000436786 MYOM3Q5VTT5 1437 aa6.97□□□□□ -1.29
LINC01239-202ENST00000436786 POLR1AO95602 1720 aaPredicted RBP6.97□□□□□ -1.29
LINC01239-202ENST00000436786 RNF17Q9BXT8 1623 aaKnown RBP6.97□□□□□ -1.29
LINC01239-202ENST00000436786 PIP4K2BP78356 416 aa6.97□□□□□ -1.29
LINC01239-202ENST00000436786 NPHP4O75161 1426 aaPredicted RBP6.97□□□□□ -1.29
LINC01239-202ENST00000436786 TOM1O60784 492 aa6.96□□□□□ -1.29
LINC01239-202ENST00000436786 HSPA1LP34931 641 aa6.96□□□□□ -1.29
LINC01239-202ENST00000436786 CPS1P31327 1500 aa6.96□□□□□ -1.29
LINC01239-202ENST00000436786 VWDEQ8N2E2 1590 aa6.96□□□□□ -1.3
LINC01239-202ENST00000436786 MED14O60244 1454 aa6.96□□□□□ -1.3
LINC01239-202ENST00000436786 MROH1Q8NDA8 1641 aa6.96□□□□□ -1.3
LINC01239-202ENST00000436786 ERVK-7P63135 1459 aa6.95□□□□□ -1.3
LINC01239-202ENST00000436786 RRP7BPQ9NSQ0 103 aa6.95□□□□□ -1.3
LINC01239-202ENST00000436786 DEPDC5O75140 1603 aa6.95□□□□□ -1.3
LINC01239-202ENST00000436786 EIF2AK4Q9P2K8 1649 aaKnown RBP6.95□□□□□ -1.3
LINC01239-202ENST00000436786 DUOX2Q9NRD8 1548 aa6.95□□□□□ -1.3
LINC01239-202ENST00000436786 ZC3H13Q5T200 1668 aaKnown RBP6.95□□□□□ -1.3
LINC01239-202ENST00000436786 ABCC5O15440 1437 aa6.94□□□□□ -1.3
LINC01239-202ENST00000436786 KIF15Q9NS87 1388 aa6.94□□□□□ -1.3
LINC01239-202ENST00000436786 COLQQ9Y215 455 aaPredicted RBP6.94□□□□□ -1.3
LINC01239-202ENST00000436786 KIF12Q96FN5 646 aa6.93□□□□□ -1.3
LINC01239-202ENST00000436786 CEP152O94986 1710 aa6.93□□□□□ -1.3
LINC01239-202ENST00000436786 IQGAP1P46940 1657 aa6.93□□□□□ -1.3
LINC01239-202ENST00000436786 LTKP29376 864 aa6.93□□□□□ -1.3
LINC01239-202ENST00000436786 TXNDC2Q86VQ3 553 aa6.93□□□□□ -1.3
LINC01239-202ENST00000436786 PTPN23Q9H3S7 1636 aa6.92□□□□□ -1.3
LINC01239-202ENST00000436786 ALKQ9UM73 1620 aa6.92□□□□□ -1.3
LINC01239-202ENST00000436786 CHIC2Q9UKJ5 165 aa6.92□□□□□ -1.3
LINC01239-202ENST00000436786 LRRC7Q96NW7 1537 aa6.92□□□□□ -1.3
LINC01239-202ENST00000436786 DAPK1P53355 1430 aa6.92□□□□□ -1.3
LINC01239-202ENST00000436786 ARHGAP31Q2M1Z3 1444 aa6.92□□□□□ -1.3
LINC01239-202ENST00000436786 ERBINQ96RT1 1412 aa6.92□□□□□ -1.3
LINC01239-202ENST00000436786 MNX1P50219 401 aaPredicted RBP6.92□□□□□ -1.3
LINC01239-202ENST00000436786 UBR1Q8IWV7 1749 aa6.91□□□□□ -1.3
LINC01239-202ENST00000436786 STRCP1A6NGW2 1772 aa6.91□□□□□ -1.3
LINC01239-202ENST00000436786 SCAF11Q99590 1463 aaKnown RBP6.91□□□□□ -1.3
LINC01239-202ENST00000436786 PRDM15P57071 1507 aaPredicted RBP6.91□□□□□ -1.3
LINC01239-202ENST00000436786 FGD6Q6ZV73 1430 aa6.91□□□□□ -1.3
LINC01239-202ENST00000436786 CROCC2H7BZ55 1655 aa6.91□□□□□ -1.3
LINC01239-202ENST00000436786 ARHGAP23Q9P227 1491 aa6.91□□□□□ -1.3
LINC01239-202ENST00000436786 KANK1Q14678 1352 aa6.9□□□□□ -1.3
LINC01239-202ENST00000436786 ANKRD30AQ9BXX3 1397 aa6.9□□□□□ -1.3
LINC01239-202ENST00000436786 SLIT1O75093 1534 aa6.9□□□□□ -1.3
LINC01239-202ENST00000436786 PLCG2P16885 1265 aa6.9□□□□□ -1.31
LINC01239-202ENST00000436786 MED1Q15648 1581 aaPredicted RBP6.9□□□□□ -1.31
LINC01239-202ENST00000436786 TSPYL2Q9H2G4 693 aaPredicted RBP6.9□□□□□ -1.31
LINC01239-202ENST00000436786 EID1Q9Y6B2 187 aa6.9□□□□□ -1.31
LINC01239-202ENST00000436786 CCDC61Q9Y6R9 512 aa6.9□□□□□ -1.31
LINC01239-202ENST00000436786 EMP3P54852 163 aa6.89□□□□□ -1.31
LINC01239-202ENST00000436786 IDI1Q13907 227 aa6.89□□□□□ -1.31
LINC01239-202ENST00000436786 CFAP65Q6ZU64 1925 aaKnown RBP6.89□□□□□ -1.31
LINC01239-202ENST00000436786 TMEM2Q9UHN6 1383 aa6.89□□□□□ -1.31
LINC01239-202ENST00000436786 PIK3C2BO00750 1634 aa6.88□□□□□ -1.31
LINC01239-202ENST00000436786 TTLL13PA6NNM8 815 aa6.88□□□□□ -1.31
LINC01239-202ENST00000436786 SYNMO15061 1565 aa6.88□□□□□ -1.31
LINC01239-202ENST00000436786 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.88□□□□□ -1.31
LINC01239-202ENST00000436786 LMTK2Q8IWU2 1503 aa6.87□□□□□ -1.31
LINC01239-202ENST00000436786 ZBTB22O15209 634 aa6.87□□□□□ -1.31
LINC01239-202ENST00000436786 FAM50AQ14320 339 aaKnown RBP6.87□□□□□ -1.31
LINC01239-202ENST00000436786 MARVELD3Q96A59 401 aa6.87□□□□□ -1.31
LINC01239-202ENST00000436786 SLC26A8Q96RN1 970 aa6.87□□□□□ -1.31
LINC01239-202ENST00000436786 EFCAB6Q5THR3 1501 aa6.86□□□□□ -1.31
LINC01239-202ENST00000436786 KCNA6P17658 529 aa6.86□□□□□ -1.31
LINC01239-202ENST00000436786 NOS1P29475 1434 aa6.86□□□□□ -1.31
LINC01239-202ENST00000436786 RBM33Q96EV2 1170 aaKnown RBP6.85□□□□□ -1.31
LINC01239-202ENST00000436786 SGIP1Q9BQI5 828 aa6.85□□□□□ -1.31
LINC01239-202ENST00000436786 ADGRL2O95490 1459 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms