RNA–Protein interactions for RNA: ENST00000428848.7

CDH13-202, Transcript of cadherin 13, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CDH13, Length 2,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-202ENST00000428848 SPAG9O60271 1321 aaKnown RBP11.68□□□□□ -0.54
CDH13-202ENST00000428848 USP35Q9P2H5 1018 aa11.68□□□□□ -0.54
CDH13-202ENST00000428848 IL27Q8NEV9 243 aa11.67□□□□□ -0.54
CDH13-202ENST00000428848 ASXL2Q76L83 1435 aa11.66□□□□□ -0.54
CDH13-202ENST00000428848 STAC3Q96MF2 364 aa11.65□□□□□ -0.54
CDH13-202ENST00000428848 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.65□□□□□ -0.54
CDH13-202ENST00000428848 PANK3Q9H999 370 aa11.65□□□□□ -0.54
CDH13-202ENST00000428848 RGL3Q3MIN7 710 aa11.65□□□□□ -0.54
CDH13-202ENST00000428848 ZFYVE16Q7Z3T8 1539 aa11.64□□□□□ -0.55
CDH13-202ENST00000428848 TSPOAP1O95153 1857 aa11.64□□□□□ -0.55
CDH13-202ENST00000428848 KANK1Q14678 1352 aa11.64□□□□□ -0.55
CDH13-202ENST00000428848 IQGAP1P46940 1657 aa11.64□□□□□ -0.55
CDH13-202ENST00000428848 FANCAO15360 1455 aa11.63□□□□□ -0.55
CDH13-202ENST00000428848 INO80Q9ULG1 1556 aaPredicted RBP11.63□□□□□ -0.55
CDH13-202ENST00000428848 TMF1P82094 1093 aa11.63□□□□□ -0.55
CDH13-202ENST00000428848 CC2D1BQ5T0F9 858 aaKnown RBP11.63□□□□□ -0.55
CDH13-202ENST00000428848 TRAPPC8Q9Y2L5 1435 aa11.63□□□□□ -0.55
CDH13-202ENST00000428848 DEPDC5O75140 1603 aa11.62□□□□□ -0.55
CDH13-202ENST00000428848 MADDQ8WXG6 1647 aa11.62□□□□□ -0.55
CDH13-202ENST00000428848 CRBNQ96SW2 442 aa11.61□□□□□ -0.55
CDH13-202ENST00000428848 KDM2BQ8NHM5 1336 aa11.61□□□□□ -0.55
CDH13-202ENST00000428848 PLIN1O60240 522 aa11.61□□□□□ -0.55
CDH13-202ENST00000428848 ZNF521Q96K83 1311 aa11.6□□□□□ -0.55
CDH13-202ENST00000428848 CFAP74Q9C0B2 1584 aa11.6□□□□□ -0.55
CDH13-202ENST00000428848 SPHKAPQ2M3C7 1700 aa11.59□□□□□ -0.55
CDH13-202ENST00000428848 ADGRL1O94910 1474 aa11.59□□□□□ -0.55
CDH13-202ENST00000428848 SYNMO15061 1565 aa11.59□□□□□ -0.55
CDH13-202ENST00000428848 ATP7AQ04656 1500 aa11.59□□□□□ -0.55
CDH13-202ENST00000428848 ADAMTS8Q9UP79 889 aa11.59□□□□□ -0.55
CDH13-202ENST00000428848 PLEKHH1Q9ULM0 1364 aa11.58□□□□□ -0.56
CDH13-202ENST00000428848 NPM2Q86SE8 214 aaKnown RBP11.58□□□□□ -0.56
CDH13-202ENST00000428848 PKNOX2Q96KN3 472 aa11.58□□□□□ -0.56
CDH13-202ENST00000428848 AMER1Q5JTC6 1135 aaPredicted RBP11.58□□□□□ -0.56
CDH13-202ENST00000428848 DUSP27Q5VZP5 1158 aa11.58□□□□□ -0.56
CDH13-202ENST00000428848 AFAP1Q8N556 730 aa11.58□□□□□ -0.56
CDH13-202ENST00000428848 CEP152O94986 1710 aa11.58□□□□□ -0.56
CDH13-202ENST00000428848 SCAPERQ9BY12 1400 aa11.58□□□□□ -0.56
CDH13-202ENST00000428848 GLI2P10070 1586 aa11.57□□□□□ -0.56
CDH13-202ENST00000428848 PPP2R1AP30153 589 aa11.57□□□□□ -0.56
CDH13-202ENST00000428848 MYOM1P52179 1685 aa11.57□□□□□ -0.56
CDH13-202ENST00000428848 NPC1L1Q9UHC9 1359 aa11.57□□□□□ -0.56
CDH13-202ENST00000428848 C20orf194Q5TEA3 1177 aa11.57□□□□□ -0.56
CDH13-202ENST00000428848 RTN4Q9NQC3 1192 aaKnown RBP11.57□□□□□ -0.56
CDH13-202ENST00000428848 PIK3C2GO75747 1445 aa11.57□□□□□ -0.56
CDH13-202ENST00000428848 VWDEQ8N2E2 1590 aa11.56□□□□□ -0.56
CDH13-202ENST00000428848 TRPM2O94759 1503 aa11.56□□□□□ -0.56
CDH13-202ENST00000428848 PPM1GO15355 546 aaPredicted RBP11.56□□□□□ -0.56
CDH13-202ENST00000428848 ZNF518AQ6AHZ1 1483 aa11.56□□□□□ -0.56
CDH13-202ENST00000428848 TET3O43151 1660 aa11.56□□□□□ -0.56
CDH13-202ENST00000428848 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.55□□□□□ -0.56
CDH13-202ENST00000428848 ASXL1Q8IXJ9 1541 aa11.55□□□□□ -0.56
CDH13-202ENST00000428848 PTPRTO14522 1441 aa11.55□□□□□ -0.56
CDH13-202ENST00000428848 TRMT2AQ8IZ69 625 aaKnown RBP11.55□□□□□ -0.56
CDH13-202ENST00000428848 SCAF11Q99590 1463 aaKnown RBP11.55□□□□□ -0.56
CDH13-202ENST00000428848 KIAA1210Q9ULL0 1709 aa11.55□□□□□ -0.56
CDH13-202ENST00000428848 PPRC1Q5VV67 1664 aaKnown RBP11.54□□□□□ -0.56
CDH13-202ENST00000428848 SKAP1Q86WV1 359 aa11.54□□□□□ -0.56
CDH13-202ENST00000428848 DDRGK1Q96HY6 314 aa11.54□□□□□ -0.56
CDH13-202ENST00000428848 CENPQQ7L2Z9 268 aaPredicted RBP11.54□□□□□ -0.56
CDH13-202ENST00000428848 NEURL4Q96JN8 1562 aa11.54□□□□□ -0.56
CDH13-202ENST00000428848 KDM4FA0A1W2PPD8 638 aa11.53□□□□□ -0.56
CDH13-202ENST00000428848 NEFMP07197 916 aa11.53□□□□□ -0.56
CDH13-202ENST00000428848 KNSTRNQ9Y448 316 aa11.53□□□□□ -0.56
CDH13-202ENST00000428848 LAS1LQ9Y4W2 734 aaKnown RBP11.53□□□□□ -0.56
CDH13-202ENST00000428848 SLFN5Q08AF3 891 aa11.52□□□□□ -0.56
CDH13-202ENST00000428848 CLTCL1P53675 1640 aa11.52□□□□□ -0.57
CDH13-202ENST00000428848 KIF3BO15066 747 aa11.52□□□□□ -0.57
CDH13-202ENST00000428848 GOLGA2Q08379 1002 aa11.52□□□□□ -0.57
CDH13-202ENST00000428848 CDCA8Q53HL2 280 aa11.52□□□□□ -0.57
CDH13-202ENST00000428848 CD109Q6YHK3 1445 aa11.52□□□□□ -0.57
CDH13-202ENST00000428848 MAP3K4Q9Y6R4 1608 aa11.51□□□□□ -0.57
CDH13-202ENST00000428848 KIDINS220Q9ULH0 1771 aa11.51□□□□□ -0.57
CDH13-202ENST00000428848 KDM5AP29375 1690 aaKnown RBP11.51□□□□□ -0.57
CDH13-202ENST00000428848 WDR43Q15061 677 aaKnown RBP eCLIP11.51□□□□□ -0.57
CDH13-202ENST00000428848 MROH1Q8NDA8 1641 aa11.5□□□□□ -0.57
CDH13-202ENST00000428848 C8orf34Q49A92 452 aa11.5□□□□□ -0.57
CDH13-202ENST00000428848 VIRMAQ69YN4 1812 aaKnown RBP11.49□□□□□ -0.57
CDH13-202ENST00000428848 EIF3AQ14152 1382 aaKnown RBP11.49□□□□□ -0.57
CDH13-202ENST00000428848 FAM161AQ3B820 660 aa11.49□□□□□ -0.57
CDH13-202ENST00000428848 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.49□□□□□ -0.57
CDH13-202ENST00000428848 PODXL2Q9NZ53 605 aa11.49□□□□□ -0.57
CDH13-202ENST00000428848 LMTK2Q8IWU2 1503 aa11.49□□□□□ -0.57
CDH13-202ENST00000428848 NEO1Q92859 1461 aa11.48□□□□□ -0.57
CDH13-202ENST00000428848 MLH3Q9UHC1 1453 aa11.48□□□□□ -0.57
CDH13-202ENST00000428848 POGZQ7Z3K3 1410 aa11.48□□□□□ -0.57
CDH13-202ENST00000428848 NKTRP30414 1462 aaKnown RBP11.47□□□□□ -0.57
CDH13-202ENST00000428848 RSPH6AQ9H0K4 717 aa11.47□□□□□ -0.57
CDH13-202ENST00000428848 HECW2Q9P2P5 1572 aa11.47□□□□□ -0.57
CDH13-202ENST00000428848 EFCAB6Q5THR3 1501 aa11.46□□□□□ -0.57
CDH13-202ENST00000428848 GSE1Q14687 1217 aa11.46□□□□□ -0.57
CDH13-202ENST00000428848 SPINK5Q9NQ38 1064 aaPredicted RBP11.46□□□□□ -0.57
CDH13-202ENST00000428848 ERVK-7P63135 1459 aa11.46□□□□□ -0.58
CDH13-202ENST00000428848 IFT172Q9UG01 1749 aa11.46□□□□□ -0.58
CDH13-202ENST00000428848 NGEFQ8N5V2 710 aa11.45□□□□□ -0.58
CDH13-202ENST00000428848 MYOM2P54296 1465 aa11.45□□□□□ -0.58
CDH13-202ENST00000428848 MYO3AQ8NEV4 1616 aa11.45□□□□□ -0.58
CDH13-202ENST00000428848 ABCA6Q8N139 1617 aa11.44□□□□□ -0.58
CDH13-202ENST00000428848 NFKBIBQ15653 356 aa11.44□□□□□ -0.58
CDH13-202ENST00000428848 BRPF3Q9ULD4 1205 aa11.44□□□□□ -0.58
CDH13-202ENST00000428848 E9PSI1 815 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms