RNA–Protein interactions for RNA: ENST00000414367.5

PCDH15-216, Transcript of protocadherin related 15, humanhuman

TSL 5

Gene PCDH15, Length 3,357 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15-216ENST00000414367 VGFO15240 615 aaPredicted RBP9.65□□□□□ -0.86
PCDH15-216ENST00000414367 C19orf44Q9H6X5 657 aa9.65□□□□□ -0.86
PCDH15-216ENST00000414367 CCDC9Q9Y3X0 531 aaKnown RBP9.65□□□□□ -0.86
PCDH15-216ENST00000414367 ABCC3O15438 1527 aa9.64□□□□□ -0.87
PCDH15-216ENST00000414367 NGLY1Q96IV0 654 aa9.64□□□□□ -0.87
PCDH15-216ENST00000414367 RIMS2Q9UQ26 1411 aa9.63□□□□□ -0.87
PCDH15-216ENST00000414367 C8orf37Q96NL8 207 aa9.63□□□□□ -0.87
PCDH15-216ENST00000414367 POGKQ9P215 609 aa9.63□□□□□ -0.87
PCDH15-216ENST00000414367 ARHGEF5Q12774 1597 aa9.63□□□□□ -0.87
PCDH15-216ENST00000414367 TBX22Q9Y458 520 aa9.63□□□□□ -0.87
PCDH15-216ENST00000414367 TCOF1Q13428 1488 aaKnown RBP9.62□□□□□ -0.87
PCDH15-216ENST00000414367 XPCQ01831 940 aaPredicted RBP9.62□□□□□ -0.87
PCDH15-216ENST00000414367 GCC2Q8IWJ2 1684 aa9.62□□□□□ -0.87
PCDH15-216ENST00000414367 ESCO1Q5FWF5 840 aa9.61□□□□□ -0.87
PCDH15-216ENST00000414367 MYO3AQ8NEV4 1616 aa9.61□□□□□ -0.87
PCDH15-216ENST00000414367 DNMT1P26358 1616 aaKnown RBP9.61□□□□□ -0.87
PCDH15-216ENST00000414367 PLXNC1O60486 1568 aa9.61□□□□□ -0.87
PCDH15-216ENST00000414367 DDX17Q92841 729 aaKnown RBP9.6□□□□□ -0.87
PCDH15-216ENST00000414367 STRCQ7RTU9 1775 aa9.6□□□□□ -0.87
PCDH15-216ENST00000414367 POLR1AO95602 1720 aaPredicted RBP9.59□□□□□ -0.87
PCDH15-216ENST00000414367 EFCAB6Q5THR3 1501 aa9.59□□□□□ -0.87
PCDH15-216ENST00000414367 TMEM132EQ6IEE7 984 aa9.59□□□□□ -0.87
PCDH15-216ENST00000414367 CPS1P31327 1500 aa9.59□□□□□ -0.87
PCDH15-216ENST00000414367 ZBTB7CA1YPR0 619 aa9.58□□□□□ -0.88
PCDH15-216ENST00000414367 FOXO3O43524 673 aa9.58□□□□□ -0.88
PCDH15-216ENST00000414367 PAK3O75914 559 aaPredicted RBP9.57□□□□□ -0.88
PCDH15-216ENST00000414367 MIER1Q8N108 512 aa9.57□□□□□ -0.88
PCDH15-216ENST00000414367 LRRC59Q96AG4 307 aaKnown RBP9.57□□□□□ -0.88
PCDH15-216ENST00000414367 GTF3C3Q9Y5Q9 886 aa9.57□□□□□ -0.88
PCDH15-216ENST00000414367 LTBP4Q8N2S1 1624 aa9.57□□□□□ -0.88
PCDH15-216ENST00000414367 MPHOSPH9Q99550 1183 aa9.56□□□□□ -0.88
PCDH15-216ENST00000414367 MROH2AA6NES4 1674 aa9.56□□□□□ -0.88
PCDH15-216ENST00000414367 ARHGAP31Q2M1Z3 1444 aa9.56□□□□□ -0.88
PCDH15-216ENST00000414367 SPATA31D1Q6ZQQ2 1576 aa9.55□□□□□ -0.88
PCDH15-216ENST00000414367 LRRC7Q96NW7 1537 aa9.55□□□□□ -0.88
PCDH15-216ENST00000414367 RXRBP28702 533 aa9.55□□□□□ -0.88
PCDH15-216ENST00000414367 HIRIP3Q9BW71 556 aaPredicted RBP9.55□□□□□ -0.88
PCDH15-216ENST00000414367 ZNF772Q68DY9 489 aaPredicted RBP9.54□□□□□ -0.88
PCDH15-216ENST00000414367 WAPLQ7Z5K2 1190 aa9.54□□□□□ -0.88
PCDH15-216ENST00000414367 CEP152O94986 1710 aa9.54□□□□□ -0.88
PCDH15-216ENST00000414367 DCAF11Q8TEB1 546 aa9.54□□□□□ -0.88
PCDH15-216ENST00000414367 ORAI2Q96SN7 254 aa9.54□□□□□ -0.88
PCDH15-216ENST00000414367 RTN4Q9NQC3 1192 aaKnown RBP9.54□□□□□ -0.88
PCDH15-216ENST00000414367 CCDC144AA2RUR9 1427 aa9.53□□□□□ -0.88
PCDH15-216ENST00000414367 JCADQ9P266 1359 aa9.53□□□□□ -0.88
PCDH15-216ENST00000414367 PLEKHG1Q9ULL1 1385 aa9.53□□□□□ -0.88
PCDH15-216ENST00000414367 PSME1Q06323 249 aa9.53□□□□□ -0.88
PCDH15-216ENST00000414367 POTEAQ6S8J7 498 aa9.53□□□□□ -0.88
PCDH15-216ENST00000414367 ROCK1Q13464 1354 aa9.53□□□□□ -0.88
PCDH15-216ENST00000414367 TRAK1Q9UPV9 953 aa9.53□□□□□ -0.88
PCDH15-216ENST00000414367 BRINP3Q76B58 766 aa9.52□□□□□ -0.88
PCDH15-216ENST00000414367 QTRT2Q9H974 415 aaKnown RBP9.52□□□□□ -0.88
PCDH15-216ENST00000414367 NGDNQ8NEJ9 315 aaKnown RBP9.52□□□□□ -0.89
PCDH15-216ENST00000414367 IQSEC2Q5JU85 1478 aa9.52□□□□□ -0.89
PCDH15-216ENST00000414367 PRDM15P57071 1507 aaPredicted RBP9.52□□□□□ -0.89
PCDH15-216ENST00000414367 PMFBP1Q8TBY8 1022 aa9.51□□□□□ -0.89
PCDH15-216ENST00000414367 MAST1Q9Y2H9 1570 aa9.5□□□□□ -0.89
PCDH15-216ENST00000414367 RAB3GAP2Q9H2M9 1393 aa9.5□□□□□ -0.89
PCDH15-216ENST00000414367 MINK1Q8N4C8 1332 aaPredicted RBP9.5□□□□□ -0.89
PCDH15-216ENST00000414367 NOS1P29475 1434 aa9.5□□□□□ -0.89
PCDH15-216ENST00000414367 SF3B2Q13435 895 aaKnown RBP9.5□□□□□ -0.89
PCDH15-216ENST00000414367 AFF2P51816 1311 aa9.5□□□□□ -0.89
PCDH15-216ENST00000414367 CFAP70Q5T0N1 1121 aa9.49□□□□□ -0.89
PCDH15-216ENST00000414367 MED14O60244 1454 aa9.49□□□□□ -0.89
PCDH15-216ENST00000414367 USP21Q9UK80 565 aa9.49□□□□□ -0.89
PCDH15-216ENST00000414367 IQGAP1P46940 1657 aa9.49□□□□□ -0.89
PCDH15-216ENST00000414367 PIK3C2BO00750 1634 aa9.48□□□□□ -0.89
PCDH15-216ENST00000414367 FAM135BQ49AJ0 1406 aa9.48□□□□□ -0.89
PCDH15-216ENST00000414367 ADGRF5Q8IZF2 1346 aa9.48□□□□□ -0.89
PCDH15-216ENST00000414367 RPRD2Q5VT52 1461 aaKnown RBP9.48□□□□□ -0.89
PCDH15-216ENST00000414367 METP08581 1390 aa9.48□□□□□ -0.89
PCDH15-216ENST00000414367 ADGRL2O95490 1459 aa9.47□□□□□ -0.89
PCDH15-216ENST00000414367 PRKCSHP14314 528 aaPredicted RBP9.47□□□□□ -0.89
PCDH15-216ENST00000414367 USP35Q9P2H5 1018 aa9.47□□□□□ -0.89
PCDH15-216ENST00000414367 EIF2AK4Q9P2K8 1649 aaKnown RBP9.47□□□□□ -0.89
PCDH15-216ENST00000414367 RPGRIP1LQ68CZ1 1315 aa9.47□□□□□ -0.89
PCDH15-216ENST00000414367 NPHP3Q7Z494 1330 aa9.47□□□□□ -0.89
PCDH15-216ENST00000414367 SETD5Q9C0A6 1442 aa9.47□□□□□ -0.89
PCDH15-216ENST00000414367 SOX12O15370 315 aa9.47□□□□□ -0.89
PCDH15-216ENST00000414367 CENPBP07199 599 aaPredicted RBP9.47□□□□□ -0.89
PCDH15-216ENST00000414367 PRAM1Q96QH2 718 aa9.47□□□□□ -0.89
PCDH15-216ENST00000414367 SPATA31A6Q5VVP1 1343 aa9.46□□□□□ -0.89
PCDH15-216ENST00000414367 NEURL4Q96JN8 1562 aa9.46□□□□□ -0.89
PCDH15-216ENST00000414367 CABLES1Q8TDN4 633 aa9.46□□□□□ -0.9
PCDH15-216ENST00000414367 RNF17Q9BXT8 1623 aaKnown RBP9.46□□□□□ -0.9
PCDH15-216ENST00000414367 SRPK2P78362 688 aaKnown RBP9.46□□□□□ -0.9
PCDH15-216ENST00000414367 NUTM2GQ5VZR2 741 aa9.46□□□□□ -0.9
PCDH15-216ENST00000414367 CROCC2H7BZ55 1655 aa9.46□□□□□ -0.9
PCDH15-216ENST00000414367 NAIPQ13075 1403 aa9.45□□□□□ -0.9
PCDH15-216ENST00000414367 ARHGAP23Q9P227 1491 aa9.45□□□□□ -0.9
PCDH15-216ENST00000414367 ZC3H13Q5T200 1668 aaKnown RBP9.45□□□□□ -0.9
PCDH15-216ENST00000414367 KRT28Q7Z3Y7 464 aa9.45□□□□□ -0.9
PCDH15-216ENST00000414367 ZNF142P52746 1687 aaPredicted RBP9.45□□□□□ -0.9
PCDH15-216ENST00000414367 HFM1A2PYH4 1435 aa9.44□□□□□ -0.9
PCDH15-216ENST00000414367 ADGRB3O60242 1522 aa9.44□□□□□ -0.9
PCDH15-216ENST00000414367 SLIT1O75093 1534 aa9.44□□□□□ -0.9
PCDH15-216ENST00000414367 PHF8Q9UPP1 1060 aa9.44□□□□□ -0.9
PCDH15-216ENST00000414367 VWDEQ8N2E2 1590 aa9.43□□□□□ -0.9
PCDH15-216ENST00000414367 EVA1CP58658 441 aa9.43□□□□□ -0.9
PCDH15-216ENST00000414367 RBM6P78332 1123 aaKnown RBP9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms