RNA–Protein interactions for RNA: ENST00000410056.7

SLC3A1-208, Transcript of solute carrier family 3 member 1, humanhuman

TSL 1 (best) BASIC

Gene SLC3A1, Length 1,426 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A1-208ENST00000410056 CCNB3Q8WWL7 1395 aa14.08□□□□□ -0.16
SLC3A1-208ENST00000410056 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.08□□□□□ -0.16
SLC3A1-208ENST00000410056 ZNF644Q9H582 1327 aaPredicted RBP14.08□□□□□ -0.16
SLC3A1-208ENST00000410056 LHX8Q68G74 356 aa14.07□□□□□ -0.16
SLC3A1-208ENST00000410056 THEMISQ8N1K5 641 aaPredicted RBP14.07□□□□□ -0.16
SLC3A1-208ENST00000410056 SGIP1Q9BQI5 828 aa14.07□□□□□ -0.16
SLC3A1-208ENST00000410056 DEPDC5O75140 1603 aa14.06□□□□□ -0.16
SLC3A1-208ENST00000410056 NPHP4O75161 1426 aaPredicted RBP14.06□□□□□ -0.16
SLC3A1-208ENST00000410056 MIA2Q96PC5 1412 aa14.06□□□□□ -0.16
SLC3A1-208ENST00000410056 RGS17Q9UGC6 210 aaPredicted RBP14.06□□□□□ -0.16
SLC3A1-208ENST00000410056 FAM135AQ9P2D6 1515 aa14.05□□□□□ -0.16
SLC3A1-208ENST00000410056 ASTLQ6HA08 431 aaPredicted RBP14.05□□□□□ -0.16
SLC3A1-208ENST00000410056 LRRC7Q96NW7 1537 aa14.04□□□□□ -0.16
SLC3A1-208ENST00000410056 KIF3BO15066 747 aa14.04□□□□□ -0.16
SLC3A1-208ENST00000410056 NLRP1Q9C000 1473 aa14.04□□□□□ -0.16
SLC3A1-208ENST00000410056 KDM5DQ9BY66 1539 aa14.03□□□□□ -0.16
SLC3A1-208ENST00000410056 MAP3K13O43283 966 aa14.03□□□□□ -0.16
SLC3A1-208ENST00000410056 KLHL34Q8N239 644 aa14.03□□□□□ -0.16
SLC3A1-208ENST00000410056 STRCP1A6NGW2 1772 aa14.02□□□□□ -0.16
SLC3A1-208ENST00000410056 UGGT1Q9NYU2 1555 aa14.02□□□□□ -0.16
SLC3A1-208ENST00000410056 TIAM1Q13009 1591 aa14.02□□□□□ -0.17
SLC3A1-208ENST00000410056 WASHC2CQ9Y4E1 1318 aa14.01□□□□□ -0.17
SLC3A1-208ENST00000410056 MTUS2Q5JR59 1369 aa14□□□□□ -0.17
SLC3A1-208ENST00000410056 IQGAP1P46940 1657 aa14□□□□□ -0.17
SLC3A1-208ENST00000410056 ATMINO43313 823 aaPredicted RBP13.98□□□□□ -0.17
SLC3A1-208ENST00000410056 RNF17Q9BXT8 1623 aaKnown RBP13.98□□□□□ -0.17
SLC3A1-208ENST00000410056 SYNMO15061 1565 aa13.97□□□□□ -0.17
SLC3A1-208ENST00000410056 TIE1P35590 1138 aa13.96□□□□□ -0.18
SLC3A1-208ENST00000410056 DCAF8Q5TAQ9 597 aa13.96□□□□□ -0.18
SLC3A1-208ENST00000410056 CEP162Q5TB80 1403 aa13.95□□□□□ -0.18
SLC3A1-208ENST00000410056 CCDC141Q6ZP82 1450 aa13.95□□□□□ -0.18
SLC3A1-208ENST00000410056 RSPH4AQ5TD94 716 aa13.95□□□□□ -0.18
SLC3A1-208ENST00000410056 PCDHB13Q9Y5F0 798 aa13.95□□□□□ -0.18
SLC3A1-208ENST00000410056 ZC3H13Q5T200 1668 aaKnown RBP13.94□□□□□ -0.18
SLC3A1-208ENST00000410056 GSE1Q14687 1217 aa13.94□□□□□ -0.18
SLC3A1-208ENST00000410056 SLC39A7Q92504 469 aa13.94□□□□□ -0.18
SLC3A1-208ENST00000410056 POTEAQ6S8J7 498 aa13.93□□□□□ -0.18
SLC3A1-208ENST00000410056 EHBP1L1Q8N3D4 1523 aa13.93□□□□□ -0.18
SLC3A1-208ENST00000410056 C7P10643 843 aa13.92□□□□□ -0.18
SLC3A1-208ENST00000410056 PELP1Q8IZL8 1130 aaKnown RBP13.92□□□□□ -0.18
SLC3A1-208ENST00000410056 ABCC3O15438 1527 aa13.91□□□□□ -0.18
SLC3A1-208ENST00000410056 ERVK-7P63135 1459 aa13.91□□□□□ -0.18
SLC3A1-208ENST00000410056 FAM135BQ49AJ0 1406 aa13.91□□□□□ -0.18
SLC3A1-208ENST00000410056 CAMSAP2Q08AD1 1489 aa13.91□□□□□ -0.18
SLC3A1-208ENST00000410056 NCOA2Q15596 1464 aa13.91□□□□□ -0.18
SLC3A1-208ENST00000410056 LTKP29376 864 aa13.9□□□□□ -0.18
SLC3A1-208ENST00000410056 BMP2KQ9NSY1 1161 aaPredicted RBP13.9□□□□□ -0.18
SLC3A1-208ENST00000410056 XIRP1Q702N8 1843 aaKnown RBP13.9□□□□□ -0.18
SLC3A1-208ENST00000410056 ARHGAP23Q9P227 1491 aa13.9□□□□□ -0.18
SLC3A1-208ENST00000410056 SCAF11Q99590 1463 aaKnown RBP13.89□□□□□ -0.19
SLC3A1-208ENST00000410056 IFNLR1Q8IU57 520 aaPredicted RBP13.89□□□□□ -0.19
SLC3A1-208ENST00000410056 ARHGEF5Q12774 1597 aa13.89□□□□□ -0.19
SLC3A1-208ENST00000410056 SLIT1O75093 1534 aa13.88□□□□□ -0.19
SLC3A1-208ENST00000410056 UBR1Q8IWV7 1749 aa13.88□□□□□ -0.19
SLC3A1-208ENST00000410056 SPOCK2Q92563 424 aa13.88□□□□□ -0.19
SLC3A1-208ENST00000410056 ATN1P54259 1190 aaPredicted RBP13.87□□□□□ -0.19
SLC3A1-208ENST00000410056 TSPY4P0CV99 314 aa13.86□□□□□ -0.19
SLC3A1-208ENST00000410056 TSPY10P0CW01 314 aa13.86□□□□□ -0.19
SLC3A1-208ENST00000410056 METRNQ9UJH8 293 aa13.86□□□□□ -0.19
SLC3A1-208ENST00000410056 TRPC6Q9Y210 931 aa13.86□□□□□ -0.19
SLC3A1-208ENST00000410056 MROH1Q8NDA8 1641 aa13.86□□□□□ -0.19
SLC3A1-208ENST00000410056 TXNDC2Q86VQ3 553 aa13.85□□□□□ -0.19
SLC3A1-208ENST00000410056 IFNL1Q8IU54 200 aa13.85□□□□□ -0.19
SLC3A1-208ENST00000410056 TTLL13PA6NNM8 815 aa13.83□□□□□ -0.2
SLC3A1-208ENST00000410056 EIF2AK4Q9P2K8 1649 aaKnown RBP13.83□□□□□ -0.2
SLC3A1-208ENST00000410056 MAST1Q9Y2H9 1570 aa13.83□□□□□ -0.2
SLC3A1-208ENST00000410056 PYGBP11216 843 aa13.82□□□□□ -0.2
SLC3A1-208ENST00000410056 ARHGAP31Q2M1Z3 1444 aa13.82□□□□□ -0.2
SLC3A1-208ENST00000410056 CHRM1P11229 460 aaPredicted RBP13.81□□□□□ -0.2
SLC3A1-208ENST00000410056 TMEM94Q12767 1356 aa13.81□□□□□ -0.2
SLC3A1-208ENST00000410056 TMEM2Q9UHN6 1383 aa13.81□□□□□ -0.2
SLC3A1-208ENST00000410056 ROBO1Q9Y6N7 1651 aa13.8□□□□□ -0.2
SLC3A1-208ENST00000410056 KCNA6P17658 529 aa13.8□□□□□ -0.2
SLC3A1-208ENST00000410056 EID1Q9Y6B2 187 aa13.8□□□□□ -0.2
SLC3A1-208ENST00000410056 CFAP65Q6ZU64 1925 aaKnown RBP13.8□□□□□ -0.2
SLC3A1-208ENST00000410056 MAP3K1Q13233 1512 aa13.79□□□□□ -0.2
SLC3A1-208ENST00000410056 CEP152O94986 1710 aa13.79□□□□□ -0.2
SLC3A1-208ENST00000410056 TET3O43151 1660 aa13.78□□□□□ -0.2
SLC3A1-208ENST00000410056 IER5LQ5T953 404 aa13.77□□□□□ -0.21
SLC3A1-208ENST00000410056 SETD1AO15047 1707 aaKnown RBP13.77□□□□□ -0.21
SLC3A1-208ENST00000410056 PIK3C2BO00750 1634 aa13.76□□□□□ -0.21
SLC3A1-208ENST00000410056 LRRC9Q6ZRR7 1453 aa13.76□□□□□ -0.21
SLC3A1-208ENST00000410056 ZNF467Q7Z7K2 595 aaPredicted RBP13.75□□□□□ -0.21
SLC3A1-208ENST00000410056 PROSER2Q86WR7 435 aaPredicted RBP13.75□□□□□ -0.21
SLC3A1-208ENST00000410056 RBM33Q96EV2 1170 aaKnown RBP13.75□□□□□ -0.21
SLC3A1-208ENST00000410056 PRDM15P57071 1507 aaPredicted RBP13.75□□□□□ -0.21
SLC3A1-208ENST00000410056 DUOX2Q9NRD8 1548 aa13.75□□□□□ -0.21
SLC3A1-208ENST00000410056 POTEB2H3BUK9 544 aa13.74□□□□□ -0.21
SLC3A1-208ENST00000410056 TMEM106CQ9BVX2 250 aa13.74□□□□□ -0.21
SLC3A1-208ENST00000410056 TRIM35Q9UPQ4 493 aa13.74□□□□□ -0.21
SLC3A1-208ENST00000410056 KDM5AP29375 1690 aaKnown RBP13.74□□□□□ -0.21
SLC3A1-208ENST00000410056 UPF1Q92900 1129 aaKnown RBP eCLIP13.73□□□□□ -0.21
SLC3A1-208ENST00000410056 SLC26A8Q96RN1 970 aa13.73□□□□□ -0.21
SLC3A1-208ENST00000410056 SLAIN2Q9P270 581 aa13.73□□□□□ -0.21
SLC3A1-208ENST00000410056 JCADQ9P266 1359 aa13.73□□□□□ -0.21
SLC3A1-208ENST00000410056 NWD1Q149M9 1564 aa13.73□□□□□ -0.21
SLC3A1-208ENST00000410056 IDI1Q13907 227 aa13.73□□□□□ -0.21
SLC3A1-208ENST00000410056 NKTRP30414 1462 aaKnown RBP13.72□□□□□ -0.21
SLC3A1-208ENST00000410056 EFCAB6Q5THR3 1501 aa13.72□□□□□ -0.21
SLC3A1-208ENST00000410056 MAMSTRQ6ZN01 415 aa13.71□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms