RNA–Protein interactions for RNA: ENST00000409292.5

LSM5-202, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-202ENST00000409292 RNF17Q9BXT8 1623 aaKnown RBP12.13□□□□□ -0.47
LSM5-202ENST00000409292 LRRC9Q6ZRR7 1453 aa12.13□□□□□ -0.47
LSM5-202ENST00000409292 SYNMO15061 1565 aa12.13□□□□□ -0.47
LSM5-202ENST00000409292 MAST1Q9Y2H9 1570 aa12.13□□□□□ -0.47
LSM5-202ENST00000409292 VPS8Q8N3P4 1428 aa12.12□□□□□ -0.47
LSM5-202ENST00000409292 SCAF11Q99590 1463 aaKnown RBP12.12□□□□□ -0.47
LSM5-202ENST00000409292 LRRC7Q96NW7 1537 aa12.11□□□□□ -0.47
LSM5-202ENST00000409292 DUOX2Q9NRD8 1548 aa12.11□□□□□ -0.47
LSM5-202ENST00000409292 KIF15Q9NS87 1388 aa12.09□□□□□ -0.47
LSM5-202ENST00000409292 BCANQ96GW7 911 aa12.09□□□□□ -0.47
LSM5-202ENST00000409292 MAP3K1Q13233 1512 aa12.08□□□□□ -0.48
LSM5-202ENST00000409292 CHADLQ6NUI6 762 aa12.08□□□□□ -0.48
LSM5-202ENST00000409292 RRP7BPQ9NSQ0 103 aa12.08□□□□□ -0.48
LSM5-202ENST00000409292 ARHGAP31Q2M1Z3 1444 aa12.08□□□□□ -0.48
LSM5-202ENST00000409292 ERBINQ96RT1 1412 aa12.08□□□□□ -0.48
LSM5-202ENST00000409292 HDGFP51858 240 aaKnown RBP12.07□□□□□ -0.48
LSM5-202ENST00000409292 CFAP65Q6ZU64 1925 aaKnown RBP12.06□□□□□ -0.48
LSM5-202ENST00000409292 UBR1Q8IWV7 1749 aa12.06□□□□□ -0.48
LSM5-202ENST00000409292 LTKP29376 864 aa12.05□□□□□ -0.48
LSM5-202ENST00000409292 PROSER2Q86WR7 435 aaPredicted RBP12.05□□□□□ -0.48
LSM5-202ENST00000409292 CEP152O94986 1710 aa12.05□□□□□ -0.48
LSM5-202ENST00000409292 SLIT1O75093 1534 aa12.05□□□□□ -0.48
LSM5-202ENST00000409292 ANKRD30AQ9BXX3 1397 aa12.05□□□□□ -0.48
LSM5-202ENST00000409292 TMEM2Q9UHN6 1383 aa12.05□□□□□ -0.48
LSM5-202ENST00000409292 ARHGAP23Q9P227 1491 aa12.04□□□□□ -0.48
LSM5-202ENST00000409292 KCNA6P17658 529 aa12.04□□□□□ -0.48
LSM5-202ENST00000409292 FAM135BQ49AJ0 1406 aa12.03□□□□□ -0.48
LSM5-202ENST00000409292 KANK4Q5T7N3 995 aaPredicted RBP12.03□□□□□ -0.48
LSM5-202ENST00000409292 PRDM15P57071 1507 aaPredicted RBP12.02□□□□□ -0.48
LSM5-202ENST00000409292 MROH1Q8NDA8 1641 aa12.02□□□□□ -0.49
LSM5-202ENST00000409292 SLC52A1Q9NWF4 448 aa12.02□□□□□ -0.49
LSM5-202ENST00000409292 TMEM94Q12767 1356 aa12.02□□□□□ -0.49
LSM5-202ENST00000409292 EFCAB6Q5THR3 1501 aa12.01□□□□□ -0.49
LSM5-202ENST00000409292 ALKQ9UM73 1620 aa12.01□□□□□ -0.49
LSM5-202ENST00000409292 C19orf67A6NJJ6 358 aa12.01□□□□□ -0.49
LSM5-202ENST00000409292 PPP1R15AO75807 674 aaPredicted RBP12.01□□□□□ -0.49
LSM5-202ENST00000409292 MSH6P52701 1360 aa12.01□□□□□ -0.49
LSM5-202ENST00000409292 STRCP1A6NGW2 1772 aa12□□□□□ -0.49
LSM5-202ENST00000409292 IDI1Q13907 227 aa12□□□□□ -0.49
LSM5-202ENST00000409292 SLC26A8Q96RN1 970 aa12□□□□□ -0.49
LSM5-202ENST00000409292 ABCC5O15440 1437 aa12□□□□□ -0.49
LSM5-202ENST00000409292 C14orf37Q86TY3 774 aa11.99□□□□□ -0.49
LSM5-202ENST00000409292 CHIC2Q9UKJ5 165 aa11.99□□□□□ -0.49
LSM5-202ENST00000409292 DAPK1P53355 1430 aa11.99□□□□□ -0.49
LSM5-202ENST00000409292 KDM5AP29375 1690 aaKnown RBP11.98□□□□□ -0.49
LSM5-202ENST00000409292 PIK3C2BO00750 1634 aa11.98□□□□□ -0.49
LSM5-202ENST00000409292 PTPN23Q9H3S7 1636 aa11.98□□□□□ -0.49
LSM5-202ENST00000409292 LOC105371045A0A1W2PR82 267 aa11.98□□□□□ -0.49
LSM5-202ENST00000409292 PROM2Q8N271 834 aa11.97□□□□□ -0.49
LSM5-202ENST00000409292 FARP1Q9Y4F1 1045 aaPredicted RBP11.97□□□□□ -0.49
LSM5-202ENST00000409292 LMTK2Q8IWU2 1503 aa11.96□□□□□ -0.49
LSM5-202ENST00000409292 NKTRP30414 1462 aaKnown RBP11.96□□□□□ -0.49
LSM5-202ENST00000409292 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.96□□□□□ -0.49
LSM5-202ENST00000409292 CROCC2H7BZ55 1655 aa11.96□□□□□ -0.5
LSM5-202ENST00000409292 FGD6Q6ZV73 1430 aa11.95□□□□□ -0.5
LSM5-202ENST00000409292 EVX2Q03828 476 aa11.95□□□□□ -0.5
LSM5-202ENST00000409292 SLAIN2Q9P270 581 aa11.95□□□□□ -0.5
LSM5-202ENST00000409292 JCADQ9P266 1359 aa11.94□□□□□ -0.5
LSM5-202ENST00000409292 CHGAP10645 457 aaKnown RBP11.94□□□□□ -0.5
LSM5-202ENST00000409292 FAM50AQ14320 339 aaKnown RBP11.94□□□□□ -0.5
LSM5-202ENST00000409292 MEX3CQ5U5Q3 659 aaKnown RBP11.94□□□□□ -0.5
LSM5-202ENST00000409292 ADGRB3O60242 1522 aa11.94□□□□□ -0.5
LSM5-202ENST00000409292 RPRD2Q5VT52 1461 aaKnown RBP11.94□□□□□ -0.5
LSM5-202ENST00000409292 RGS17Q9UGC6 210 aaPredicted RBP11.93□□□□□ -0.5
LSM5-202ENST00000409292 NOS1P29475 1434 aa11.93□□□□□ -0.5
LSM5-202ENST00000409292 ROBO1Q9Y6N7 1651 aa11.92□□□□□ -0.5
LSM5-202ENST00000409292 ATF3P18847 181 aa11.92□□□□□ -0.5
LSM5-202ENST00000409292 CADPS2Q86UW7 1296 aa11.92□□□□□ -0.5
LSM5-202ENST00000409292 RBM33Q96EV2 1170 aaKnown RBP11.92□□□□□ -0.5
LSM5-202ENST00000409292 CREBZFQ9NS37 354 aa11.92□□□□□ -0.5
LSM5-202ENST00000409292 PLEKHG1Q9ULL1 1385 aa11.92□□□□□ -0.5
LSM5-202ENST00000409292 XIRP1Q702N8 1843 aaKnown RBP11.91□□□□□ -0.5
LSM5-202ENST00000409292 ZNF772Q68DY9 489 aaPredicted RBP11.91□□□□□ -0.5
LSM5-202ENST00000409292 POTEAQ6S8J7 498 aa11.91□□□□□ -0.5
LSM5-202ENST00000409292 TBX22Q9Y458 520 aa11.91□□□□□ -0.5
LSM5-202ENST00000409292 ANKRD50Q9ULJ7 1429 aa11.91□□□□□ -0.5
LSM5-202ENST00000409292 NCOA3Q9Y6Q9 1424 aa11.91□□□□□ -0.5
LSM5-202ENST00000409292 SPATA31A6Q5VVP1 1343 aa11.9□□□□□ -0.5
LSM5-202ENST00000409292 TET3O43151 1660 aa11.9□□□□□ -0.5
LSM5-202ENST00000409292 NWD1Q149M9 1564 aa11.89□□□□□ -0.51
LSM5-202ENST00000409292 RIMS2Q9UQ26 1411 aa11.89□□□□□ -0.51
LSM5-202ENST00000409292 C19orf44Q9H6X5 657 aa11.88□□□□□ -0.51
LSM5-202ENST00000409292 PHLPP1O60346 1717 aa11.88□□□□□ -0.51
LSM5-202ENST00000409292 ADGRL2O95490 1459 aa11.88□□□□□ -0.51
LSM5-202ENST00000409292 CD44P16070 742 aaKnown RBP11.87□□□□□ -0.51
LSM5-202ENST00000409292 PIK3R4Q99570 1358 aa11.87□□□□□ -0.51
LSM5-202ENST00000409292 ZFYVE9O95405 1425 aa11.85□□□□□ -0.51
LSM5-202ENST00000409292 DIP2AQ14689 1571 aa11.84□□□□□ -0.51
LSM5-202ENST00000409292 RXRBP28702 533 aa11.83□□□□□ -0.52
LSM5-202ENST00000409292 CHD2O14647 1828 aaKnown RBP11.83□□□□□ -0.52
LSM5-202ENST00000409292 TRIM52Q96A61 297 aa11.82□□□□□ -0.52
LSM5-202ENST00000409292 AMOTL2Q9Y2J4 779 aa11.82□□□□□ -0.52
LSM5-202ENST00000409292 GCC2Q8IWJ2 1684 aa11.81□□□□□ -0.52
LSM5-202ENST00000409292 NUTM2BA6NNL0 878 aaPredicted RBP11.81□□□□□ -0.52
LSM5-202ENST00000409292 NUTM2EB1AL46 878 aaPredicted RBP11.81□□□□□ -0.52
LSM5-202ENST00000409292 ZNF326Q5BKZ1 582 aaKnown RBP11.81□□□□□ -0.52
LSM5-202ENST00000409292 NUTM2DQ5VT03 806 aaPredicted RBP11.81□□□□□ -0.52
LSM5-202ENST00000409292 NUTM2AQ8IVF1 878 aaPredicted RBP11.81□□□□□ -0.52
LSM5-202ENST00000409292 TRPM2O94759 1503 aa11.81□□□□□ -0.52
LSM5-202ENST00000409292 TMEM131LA2VDJ0 1609 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms