RNA–Protein interactions for RNA: ENST00000398969.7

COL13A1-203, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-203ENST00000398969 NOP58Q9Y2X3 529 aaKnown RBP34.06■■■■□ 3.04
COL13A1-203ENST00000398969 MAP3K4Q9Y6R4 1608 aa34.06■■■■□ 3.04
COL13A1-203ENST00000398969 TET3O43151 1660 aa34.05■■■■□ 3.04
COL13A1-203ENST00000398969 MROH1Q8NDA8 1641 aa34.04■■■■□ 3.04
COL13A1-203ENST00000398969 GLI2P10070 1586 aa34.03■■■■□ 3.04
COL13A1-203ENST00000398969 HECW2Q9P2P5 1572 aa34.03■■■■□ 3.04
COL13A1-203ENST00000398969 CDCA7LQ96GN5 454 aa34.02■■■■□ 3.04
COL13A1-203ENST00000398969 MADDQ8WXG6 1647 aa34.01■■■■□ 3.04
COL13A1-203ENST00000398969 PTPRTO14522 1441 aa34■■■■□ 3.03
COL13A1-203ENST00000398969 TRPM2O94759 1503 aa33.99■■■■□ 3.03
COL13A1-203ENST00000398969 RAPGEF3O95398 923 aa33.98■■■■□ 3.03
COL13A1-203ENST00000398969 IQGAP1P46940 1657 aa33.97■■■■□ 3.03
COL13A1-203ENST00000398969 SPHKAPQ2M3C7 1700 aa33.97■■■■□ 3.03
COL13A1-203ENST00000398969 ANP32AP39687 249 aaKnown RBP33.96■■■■□ 3.03
COL13A1-203ENST00000398969 PAK3O75914 559 aaPredicted RBP33.95■■■■□ 3.02
COL13A1-203ENST00000398969 FRMPD1Q5SYB0 1578 aa33.95■■■■□ 3.02
COL13A1-203ENST00000398969 BCL11AQ9H165 835 aa33.93■■■■□ 3.02
COL13A1-203ENST00000398969 IPO9Q96P70 1041 aaKnown RBP33.92■■■■□ 3.02
COL13A1-203ENST00000398969 ABCA6Q8N139 1617 aa33.92■■■■□ 3.02
COL13A1-203ENST00000398969 CEP152O94986 1710 aa33.91■■■■□ 3.02
COL13A1-203ENST00000398969 FAM69CQ0P6D2 419 aa33.9■■■■□ 3.02
COL13A1-203ENST00000398969 DIP2BQ9P265 1576 aa33.89■■■■□ 3.02
COL13A1-203ENST00000398969 RICTORQ6R327 1708 aa33.88■■■■□ 3.01
COL13A1-203ENST00000398969 TCERG1O14776 1098 aaKnown RBP33.87■■■■□ 3.01
COL13A1-203ENST00000398969 CLTCL1P53675 1640 aa33.87■■■■□ 3.01
COL13A1-203ENST00000398969 LMTK2Q8IWU2 1503 aa33.87■■■■□ 3.01
COL13A1-203ENST00000398969 EFCAB6Q5THR3 1501 aa33.86■■■■□ 3.01
COL13A1-203ENST00000398969 SCAF11Q99590 1463 aaKnown RBP33.85■■■■□ 3.01
COL13A1-203ENST00000398969 SYNMO15061 1565 aa33.85■■■■□ 3.01
COL13A1-203ENST00000398969 KNSTRNQ9Y448 316 aa33.84■■■■□ 3.01
COL13A1-203ENST00000398969 ADAMTS8Q9UP79 889 aa33.83■■■■□ 3.01
COL13A1-203ENST00000398969 STAC3Q96MF2 364 aa33.83■■■■□ 3.01
COL13A1-203ENST00000398969 PPRC1Q5VV67 1664 aaKnown RBP33.82■■■■□ 3
COL13A1-203ENST00000398969 PLIN1O60240 522 aa33.81■■■■□ 3
COL13A1-203ENST00000398969 PPP2R1AP30153 589 aa33.81■■■■□ 3
COL13A1-203ENST00000398969 DIP2CQ9Y2E4 1556 aa33.8■■■■□ 3
COL13A1-203ENST00000398969 AMER1Q5JTC6 1135 aaPredicted RBP33.8■■■■□ 3
COL13A1-203ENST00000398969 CDCA8Q53HL2 280 aa33.79■■■■□ 3
COL13A1-203ENST00000398969 GGT6Q6P531 493 aa33.79■■■■□ 3
COL13A1-203ENST00000398969 ZBTB47Q9UFB7 747 aaPredicted RBP33.76■■■■□ 3
COL13A1-203ENST00000398969 ASXL1Q8IXJ9 1541 aa33.75■■■□□ 2.99
COL13A1-203ENST00000398969 MYOM1P52179 1685 aa33.74■■■□□ 2.99
COL13A1-203ENST00000398969 MS4A1P11836 297 aa33.74■■■□□ 2.99
COL13A1-203ENST00000398969 CRBNQ96SW2 442 aa33.74■■■□□ 2.99
COL13A1-203ENST00000398969 PDE4AP27815 886 aa33.73■■■□□ 2.99
COL13A1-203ENST00000398969 WDR43Q15061 677 aaKnown RBP eCLIP33.73■■■□□ 2.99
COL13A1-203ENST00000398969 NEURL4Q96JN8 1562 aa33.73■■■□□ 2.99
COL13A1-203ENST00000398969 YEATS2Q9ULM3 1422 aa33.72■■■□□ 2.99
COL13A1-203ENST00000398969 PLEKHH1Q9ULM0 1364 aa33.72■■■□□ 2.99
COL13A1-203ENST00000398969 KIAA1210Q9ULL0 1709 aa33.71■■■□□ 2.99
COL13A1-203ENST00000398969 UGGT1Q9NYU2 1555 aa33.71■■■□□ 2.99
COL13A1-203ENST00000398969 TSPOAP1O95153 1857 aa33.7■■■□□ 2.99
COL13A1-203ENST00000398969 NBR1Q14596 966 aa33.7■■■□□ 2.99
COL13A1-203ENST00000398969 EIF3AQ14152 1382 aaKnown RBP33.7■■■□□ 2.98
COL13A1-203ENST00000398969 PIK3C2GO75747 1445 aa33.69■■■□□ 2.98
COL13A1-203ENST00000398969 BACH2Q9BYV9 841 aa33.69■■■□□ 2.98
COL13A1-203ENST00000398969 NPATQ14207 1427 aa33.69■■■□□ 2.98
COL13A1-203ENST00000398969 ABCC3O15438 1527 aa33.68■■■□□ 2.98
COL13A1-203ENST00000398969 NPC1L1Q9UHC9 1359 aa33.68■■■□□ 2.98
COL13A1-203ENST00000398969 ZNF521Q96K83 1311 aa33.67■■■□□ 2.98
COL13A1-203ENST00000398969 KDM5AP29375 1690 aaKnown RBP33.65■■■□□ 2.98
COL13A1-203ENST00000398969 DEKP35659 375 aaKnown RBP33.65■■■□□ 2.98
COL13A1-203ENST00000398969 DUSP27Q5VZP5 1158 aa33.65■■■□□ 2.98
COL13A1-203ENST00000398969 KIF1BO60333 1816 aa33.64■■■□□ 2.98
COL13A1-203ENST00000398969 C20orf194Q5TEA3 1177 aa33.63■■■□□ 2.97
COL13A1-203ENST00000398969 NPM2Q86SE8 214 aaKnown RBP33.62■■■□□ 2.97
COL13A1-203ENST00000398969 MYOM2P54296 1465 aa33.59■■■□□ 2.97
COL13A1-203ENST00000398969 GOLGA2Q08379 1002 aa33.59■■■□□ 2.97
COL13A1-203ENST00000398969 CAMSAP1Q5T5Y3 1602 aa33.59■■■□□ 2.97
COL13A1-203ENST00000398969 CFAP65Q6ZU64 1925 aaKnown RBP33.59■■■□□ 2.97
COL13A1-203ENST00000398969 ERVK-7P63135 1459 aa33.55■■■□□ 2.96
COL13A1-203ENST00000398969 MROH2AA6NES4 1674 aa33.54■■■□□ 2.96
COL13A1-203ENST00000398969 CFAP70Q5T0N1 1121 aa33.54■■■□□ 2.96
COL13A1-203ENST00000398969 KIF13AQ9H1H9 1805 aa33.54■■■□□ 2.96
COL13A1-203ENST00000398969 KDM2BQ8NHM5 1336 aa33.53■■■□□ 2.96
COL13A1-203ENST00000398969 SKAP1Q86WV1 359 aa33.52■■■□□ 2.96
COL13A1-203ENST00000398969 ADGRB3O60242 1522 aa33.52■■■□□ 2.96
COL13A1-203ENST00000398969 SLC24A1O60721 1099 aa33.51■■■□□ 2.96
COL13A1-203ENST00000398969 SLFN5Q08AF3 891 aa33.51■■■□□ 2.96
COL13A1-203ENST00000398969 ZC3H13Q5T200 1668 aaKnown RBP33.51■■■□□ 2.96
COL13A1-203ENST00000398969 NOS1P29475 1434 aa33.5■■■□□ 2.95
COL13A1-203ENST00000398969 ADGRF5Q8IZF2 1346 aa33.5■■■□□ 2.95
COL13A1-203ENST00000398969 IFT172Q9UG01 1749 aa33.5■■■□□ 2.95
COL13A1-203ENST00000398969 ARHGAP31Q2M1Z3 1444 aa33.49■■■□□ 2.95
COL13A1-203ENST00000398969 SIGLEC1Q9BZZ2 1709 aa33.49■■■□□ 2.95
COL13A1-203ENST00000398969 CCDC146Q8IYE0 955 aa33.48■■■□□ 2.95
COL13A1-203ENST00000398969 TRMT2AQ8IZ69 625 aaKnown RBP33.47■■■□□ 2.95
COL13A1-203ENST00000398969 GOLGA6L2Q8N9W4 650 aaPredicted RBP33.46■■■□□ 2.95
COL13A1-203ENST00000398969 CHGAP10645 457 aaKnown RBP33.45■■■□□ 2.95
COL13A1-203ENST00000398969 RTL5Q5HYW3 569 aaPredicted RBP33.45■■■□□ 2.94
COL13A1-203ENST00000398969 CENPQQ7L2Z9 268 aaPredicted RBP33.45■■■□□ 2.94
COL13A1-203ENST00000398969 NRXN1Q9ULB1 1477 aa33.44■■■□□ 2.94
COL13A1-203ENST00000398969 MYO3AQ8NEV4 1616 aa33.43■■■□□ 2.94
COL13A1-203ENST00000398969 CARD14Q9BXL6 1004 aa33.42■■■□□ 2.94
COL13A1-203ENST00000398969 REREQ9P2R6 1566 aa33.42■■■□□ 2.94
COL13A1-203ENST00000398969 APAF1O14727 1248 aa33.41■■■□□ 2.94
COL13A1-203ENST00000398969 PIK3C2BO00750 1634 aa33.4■■■□□ 2.94
COL13A1-203ENST00000398969 NKTRP30414 1462 aaKnown RBP33.39■■■□□ 2.94
COL13A1-203ENST00000398969 SPINK5Q9NQ38 1064 aaPredicted RBP33.39■■■□□ 2.94
COL13A1-203ENST00000398969 SBNO2Q9Y2G9 1366 aa33.39■■■□□ 2.94
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms