RNA–Protein interactions for RNA: ENST00000396175.5

TRAK1-203, Transcript of trafficking kinesin protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRAK1, Length 5,033 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAK1-203ENST00000396175 LNPKQ9C0E8 428 aa17.75■□□□□ 0.43
TRAK1-203ENST00000396175 CADPSQ9ULU8 1353 aa17.75■□□□□ 0.43
TRAK1-203ENST00000396175 ZKSCAN1P17029 563 aaPredicted RBP17.75■□□□□ 0.43
TRAK1-203ENST00000396175 PANK1Q8TE04 598 aa17.75■□□□□ 0.43
TRAK1-203ENST00000396175 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.74■□□□□ 0.43
TRAK1-203ENST00000396175 TEX35Q5T0J7 233 aa17.74■□□□□ 0.43
TRAK1-203ENST00000396175 EVC2Q86UK5 1308 aa17.74■□□□□ 0.43
TRAK1-203ENST00000396175 MLECQ14165 292 aa17.74■□□□□ 0.43
TRAK1-203ENST00000396175 MYOM3Q5VTT5 1437 aa17.74■□□□□ 0.43
TRAK1-203ENST00000396175 ROCK1Q13464 1354 aa17.74■□□□□ 0.43
TRAK1-203ENST00000396175 A0A0U1RQG5 324 aaPredicted RBP17.73■□□□□ 0.43
TRAK1-203ENST00000396175 CCAR2Q8N163 923 aaKnown RBP17.73■□□□□ 0.43
TRAK1-203ENST00000396175 RRBP1Q9P2E9 1410 aaKnown RBP17.73■□□□□ 0.43
TRAK1-203ENST00000396175 CHMP3Q9Y3E7 222 aa17.73■□□□□ 0.43
TRAK1-203ENST00000396175 CDCA7LQ96GN5 454 aa17.73■□□□□ 0.43
TRAK1-203ENST00000396175 SETQ01105 290 aaPredicted RBP17.72■□□□□ 0.43
TRAK1-203ENST00000396175 ANO2Q9NQ90 1003 aa17.72■□□□□ 0.43
TRAK1-203ENST00000396175 LRRC9Q6ZRR7 1453 aa17.72■□□□□ 0.43
TRAK1-203ENST00000396175 ADAMTS8Q9UP79 889 aa17.71■□□□□ 0.43
TRAK1-203ENST00000396175 CDC45O75419 566 aa17.71■□□□□ 0.43
TRAK1-203ENST00000396175 RIPK4P57078 832 aa17.71■□□□□ 0.43
TRAK1-203ENST00000396175 SMG6Q86US8 1419 aaKnown RBP17.71■□□□□ 0.43
TRAK1-203ENST00000396175 AKNAQ7Z591 1439 aa17.71■□□□□ 0.42
TRAK1-203ENST00000396175 RASSF8Q8NHQ8 419 aa17.71■□□□□ 0.42
TRAK1-203ENST00000396175 AMPHP49418 695 aa17.7■□□□□ 0.42
TRAK1-203ENST00000396175 CCDC173Q0VFZ6 552 aa17.7■□□□□ 0.42
TRAK1-203ENST00000396175 MBD3O95983 291 aa17.7■□□□□ 0.42
TRAK1-203ENST00000396175 STAC3Q96MF2 364 aa17.7■□□□□ 0.42
TRAK1-203ENST00000396175 DIAPH1O60610 1272 aaKnown RBP17.7■□□□□ 0.42
TRAK1-203ENST00000396175 TPM1P09493 284 aa17.7■□□□□ 0.42
TRAK1-203ENST00000396175 PDE3AQ14432 1141 aa17.7■□□□□ 0.42
TRAK1-203ENST00000396175 TAF7LQ5H9L4 462 aa17.69■□□□□ 0.42
TRAK1-203ENST00000396175 CREBRFQ8IUR6 639 aa17.69■□□□□ 0.42
TRAK1-203ENST00000396175 TSR1Q2NL82 804 aaKnown RBP17.69■□□□□ 0.42
TRAK1-203ENST00000396175 SMC3Q9UQE7 1217 aa17.69■□□□□ 0.42
TRAK1-203ENST00000396175 WASHC2CQ9Y4E1 1318 aa17.69■□□□□ 0.42
TRAK1-203ENST00000396175 BICD2Q8TD16 824 aa17.69■□□□□ 0.42
TRAK1-203ENST00000396175 CUX1P39880 1505 aa17.68■□□□□ 0.42
TRAK1-203ENST00000396175 HMGN5P82970 282 aaKnown RBP17.68■□□□□ 0.42
TRAK1-203ENST00000396175 HOMER1Q86YM7 354 aa17.68■□□□□ 0.42
TRAK1-203ENST00000396175 PKNOX2Q96KN3 472 aa17.68■□□□□ 0.42
TRAK1-203ENST00000396175 IFT57Q9NWB7 429 aa17.67■□□□□ 0.42
TRAK1-203ENST00000396175 SASS6Q6UVJ0 657 aa17.67■□□□□ 0.42
TRAK1-203ENST00000396175 TPD52L1Q16890 204 aaPredicted RBP17.66■□□□□ 0.42
TRAK1-203ENST00000396175 PNISRQ8TF01 805 aaKnown RBP17.66■□□□□ 0.42
TRAK1-203ENST00000396175 ARGLU1Q9NWB6 273 aaPredicted RBP17.66■□□□□ 0.42
TRAK1-203ENST00000396175 ATAD2BQ9ULI0 1458 aa17.66■□□□□ 0.42
TRAK1-203ENST00000396175 VGFO15240 615 aaPredicted RBP17.66■□□□□ 0.42
TRAK1-203ENST00000396175 NUTM2DQ5VT03 806 aaPredicted RBP17.66■□□□□ 0.42
TRAK1-203ENST00000396175 CCDC70Q6NSX1 233 aa17.66■□□□□ 0.42
TRAK1-203ENST00000396175 COG3Q96JB2 828 aa17.66■□□□□ 0.42
TRAK1-203ENST00000396175 PDZRN3Q9UPQ7 1066 aa17.66■□□□□ 0.42
TRAK1-203ENST00000396175 VPS37CA5D8V6 355 aaPredicted RBP17.65■□□□□ 0.42
TRAK1-203ENST00000396175 CAVIN1Q6NZI2 390 aaKnown RBP17.65■□□□□ 0.42
TRAK1-203ENST00000396175 CLSTN1O94985 981 aa17.65■□□□□ 0.42
TRAK1-203ENST00000396175 CPLX2Q6PUV4 134 aaKnown RBP17.65■□□□□ 0.42
TRAK1-203ENST00000396175 IGF1RP08069 1367 aa17.65■□□□□ 0.42
TRAK1-203ENST00000396175 RNF20Q5VTR2 975 aa17.65■□□□□ 0.42
TRAK1-203ENST00000396175 SMARCA4P51532 1647 aa17.65■□□□□ 0.42
TRAK1-203ENST00000396175 GNAI1P63096 354 aa17.65■□□□□ 0.42
TRAK1-203ENST00000396175 RNF214Q8ND24 703 aa17.65■□□□□ 0.42
TRAK1-203ENST00000396175 ZNF330Q9Y3S2 320 aaPredicted RBP17.65■□□□□ 0.42
TRAK1-203ENST00000396175 MSH5O43196 834 aa17.64■□□□□ 0.41
TRAK1-203ENST00000396175 NGDNQ8NEJ9 315 aaKnown RBP17.64■□□□□ 0.41
TRAK1-203ENST00000396175 CSB-PGBD3P0DP91 1061 aa17.64■□□□□ 0.41
TRAK1-203ENST00000396175 JPH4Q96JJ6 628 aa17.64■□□□□ 0.41
TRAK1-203ENST00000396175 LETM1O95202 739 aaPredicted RBP17.62■□□□□ 0.41
TRAK1-203ENST00000396175 RABEP1Q15276 862 aa17.62■□□□□ 0.41
TRAK1-203ENST00000396175 TOMM22Q9NS69 142 aa17.62■□□□□ 0.41
TRAK1-203ENST00000396175 GRPEL1Q9HAV7 217 aa17.62■□□□□ 0.41
TRAK1-203ENST00000396175 PES1O00541 588 aaKnown RBP17.62■□□□□ 0.41
TRAK1-203ENST00000396175 RRP9O43818 475 aaKnown RBP17.61■□□□□ 0.41
TRAK1-203ENST00000396175 MNS1Q8NEH6 495 aa17.61■□□□□ 0.41
TRAK1-203ENST00000396175 MCM2P49736 904 aa17.61■□□□□ 0.41
TRAK1-203ENST00000396175 LRRFIP1Q32MZ4 808 aaKnown RBP17.61■□□□□ 0.41
TRAK1-203ENST00000396175 CCDC73Q6ZRK6 1079 aa17.61■□□□□ 0.41
TRAK1-203ENST00000396175 IFIT2P09913 472 aaKnown RBP17.6■□□□□ 0.41
TRAK1-203ENST00000396175 ESPNB1AK53 854 aa17.6■□□□□ 0.41
TRAK1-203ENST00000396175 IPO7O95373 1038 aaKnown RBP17.6■□□□□ 0.41
TRAK1-203ENST00000396175 PPP2R1AP30153 589 aa17.59■□□□□ 0.41
TRAK1-203ENST00000396175 NINLQ9Y2I6 1382 aa17.59■□□□□ 0.41
TRAK1-203ENST00000396175 TCP11L2Q8N4U5 519 aa17.59■□□□□ 0.41
TRAK1-203ENST00000396175 TSPY26PQ9H489 355 aa17.59■□□□□ 0.41
TRAK1-203ENST00000396175 HSP90AB4PQ58FF6 505 aa17.59■□□□□ 0.41
TRAK1-203ENST00000396175 MCM4P33991 863 aa17.58■□□□□ 0.41
TRAK1-203ENST00000396175 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.58■□□□□ 0.41
TRAK1-203ENST00000396175 CCDC66A2RUB6 948 aa17.58■□□□□ 0.4
TRAK1-203ENST00000396175 PRPF40AO75400 957 aaKnown RBP17.58■□□□□ 0.4
TRAK1-203ENST00000396175 LTV1Q96GA3 475 aaPredicted RBP17.58■□□□□ 0.4
TRAK1-203ENST00000396175 C9orf78Q9NZ63 289 aaPredicted RBP17.58■□□□□ 0.4
TRAK1-203ENST00000396175 HOOK1Q9UJC3 728 aaKnown RBP17.58■□□□□ 0.4
TRAK1-203ENST00000396175 CIZ1Q9ULV3 898 aaPredicted RBP17.58■□□□□ 0.4
TRAK1-203ENST00000396175 CPLX1O14810 134 aa17.57■□□□□ 0.4
TRAK1-203ENST00000396175 ANKRD20A12PQ8NF67 263 aa17.57■□□□□ 0.4
TRAK1-203ENST00000396175 CASKIN1Q8WXD9 1431 aa17.56■□□□□ 0.4
TRAK1-203ENST00000396175 ANKRD50Q9ULJ7 1429 aa17.56■□□□□ 0.4
TRAK1-203ENST00000396175 AKAP17AQ02040 695 aaKnown RBP17.56■□□□□ 0.4
TRAK1-203ENST00000396175 FKBP5Q13451 457 aaPredicted RBP17.56■□□□□ 0.4
TRAK1-203ENST00000396175 FYCO1Q9BQS8 1478 aa17.56■□□□□ 0.4
TRAK1-203ENST00000396175 SYNE3Q6ZMZ3 975 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms