RNA–Protein interactions for RNA: ENST00000395667.7

CDRT1-203, CMT1A duplicated region transcript 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CDRT1, Length 3,016 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-203ENST00000395667 PPP2R1AP30153 589 aa12.26□□□□□ -0.45
CDRT1-203ENST00000395667 ADAMTS8Q9UP79 889 aa12.26□□□□□ -0.45
CDRT1-203ENST00000395667 INSRP06213 1382 aa12.26□□□□□ -0.45
CDRT1-203ENST00000395667 CFAP70Q5T0N1 1121 aa12.26□□□□□ -0.45
CDRT1-203ENST00000395667 VWDEQ8N2E2 1590 aa12.26□□□□□ -0.45
CDRT1-203ENST00000395667 AMER1Q5JTC6 1135 aaPredicted RBP12.25□□□□□ -0.45
CDRT1-203ENST00000395667 CHGAP10645 457 aaKnown RBP12.24□□□□□ -0.45
CDRT1-203ENST00000395667 UGGT1Q9NYU2 1555 aa12.24□□□□□ -0.45
CDRT1-203ENST00000395667 ZMYM4Q5VZL5 1548 aa12.24□□□□□ -0.45
CDRT1-203ENST00000395667 ADGRF5Q8IZF2 1346 aa12.24□□□□□ -0.45
CDRT1-203ENST00000395667 SYNMO15061 1565 aa12.24□□□□□ -0.45
CDRT1-203ENST00000395667 SLC24A1O60721 1099 aa12.23□□□□□ -0.45
CDRT1-203ENST00000395667 ASXL1Q8IXJ9 1541 aa12.22□□□□□ -0.45
CDRT1-203ENST00000395667 MROH1Q8NDA8 1641 aa12.22□□□□□ -0.45
CDRT1-203ENST00000395667 ZNF518AQ6AHZ1 1483 aa12.22□□□□□ -0.45
CDRT1-203ENST00000395667 PLIN1O60240 522 aa12.21□□□□□ -0.45
CDRT1-203ENST00000395667 KIF1BO60333 1816 aa12.21□□□□□ -0.45
CDRT1-203ENST00000395667 EFCAB6Q5THR3 1501 aa12.21□□□□□ -0.45
CDRT1-203ENST00000395667 KIAA1210Q9ULL0 1709 aa12.21□□□□□ -0.45
CDRT1-203ENST00000395667 KIDINS220Q9ULH0 1771 aa12.21□□□□□ -0.46
CDRT1-203ENST00000395667 MAP3K4Q9Y6R4 1608 aa12.21□□□□□ -0.46
CDRT1-203ENST00000395667 GGT6Q6P531 493 aa12.21□□□□□ -0.46
CDRT1-203ENST00000395667 MYOM2P54296 1465 aa12.2□□□□□ -0.46
CDRT1-203ENST00000395667 KDM5AP29375 1690 aaKnown RBP12.2□□□□□ -0.46
CDRT1-203ENST00000395667 NEURL4Q96JN8 1562 aa12.19□□□□□ -0.46
CDRT1-203ENST00000395667 ABCA6Q8N139 1617 aa12.19□□□□□ -0.46
CDRT1-203ENST00000395667 PPRC1Q5VV67 1664 aaKnown RBP12.19□□□□□ -0.46
CDRT1-203ENST00000395667 ANP32AP39687 249 aaKnown RBP12.19□□□□□ -0.46
CDRT1-203ENST00000395667 CD109Q6YHK3 1445 aa12.18□□□□□ -0.46
CDRT1-203ENST00000395667 CFAP65Q6ZU64 1925 aaKnown RBP12.18□□□□□ -0.46
CDRT1-203ENST00000395667 OSCARQ8IYS5 282 aa12.18□□□□□ -0.46
CDRT1-203ENST00000395667 MYOM1P52179 1685 aa12.18□□□□□ -0.46
CDRT1-203ENST00000395667 NPC1L1Q9UHC9 1359 aa12.18□□□□□ -0.46
CDRT1-203ENST00000395667 PIK3C2GO75747 1445 aa12.18□□□□□ -0.46
CDRT1-203ENST00000395667 NOS1P29475 1434 aa12.17□□□□□ -0.46
CDRT1-203ENST00000395667 PLEKHH1Q9ULM0 1364 aa12.17□□□□□ -0.46
CDRT1-203ENST00000395667 ERVK-7P63135 1459 aa12.17□□□□□ -0.46
CDRT1-203ENST00000395667 CRBNQ96SW2 442 aa12.17□□□□□ -0.46
CDRT1-203ENST00000395667 GOLGA2Q08379 1002 aa12.16□□□□□ -0.46
CDRT1-203ENST00000395667 CCDC146Q8IYE0 955 aa12.16□□□□□ -0.46
CDRT1-203ENST00000395667 CENPJQ9HC77 1338 aaPredicted RBP12.16□□□□□ -0.46
CDRT1-203ENST00000395667 LMTK2Q8IWU2 1503 aa12.16□□□□□ -0.46
CDRT1-203ENST00000395667 MROH2AA6NES4 1674 aa12.16□□□□□ -0.46
CDRT1-203ENST00000395667 TRAK1Q9UPV9 953 aa12.16□□□□□ -0.46
CDRT1-203ENST00000395667 NOP58Q9Y2X3 529 aaKnown RBP12.16□□□□□ -0.46
CDRT1-203ENST00000395667 TCERG1O14776 1098 aaKnown RBP12.15□□□□□ -0.46
CDRT1-203ENST00000395667 POGZQ7Z3K3 1410 aa12.15□□□□□ -0.46
CDRT1-203ENST00000395667 DUSP27Q5VZP5 1158 aa12.14□□□□□ -0.47
CDRT1-203ENST00000395667 CARD14Q9BXL6 1004 aa12.14□□□□□ -0.47
CDRT1-203ENST00000395667 NPATQ14207 1427 aa12.14□□□□□ -0.47
CDRT1-203ENST00000395667 IFT172Q9UG01 1749 aa12.14□□□□□ -0.47
CDRT1-203ENST00000395667 CFAP74Q9C0B2 1584 aa12.13□□□□□ -0.47
CDRT1-203ENST00000395667 APAF1O14727 1248 aa12.13□□□□□ -0.47
CDRT1-203ENST00000395667 ADGRB3O60242 1522 aa12.13□□□□□ -0.47
CDRT1-203ENST00000395667 NRXN1Q9ULB1 1477 aa12.13□□□□□ -0.47
CDRT1-203ENST00000395667 MLH3Q9UHC1 1453 aa12.13□□□□□ -0.47
CDRT1-203ENST00000395667 ZNF521Q96K83 1311 aa12.12□□□□□ -0.47
CDRT1-203ENST00000395667 C20orf194Q5TEA3 1177 aa12.12□□□□□ -0.47
CDRT1-203ENST00000395667 TMEM132EQ6IEE7 984 aa12.12□□□□□ -0.47
CDRT1-203ENST00000395667 SBNO2Q9Y2G9 1366 aa12.12□□□□□ -0.47
CDRT1-203ENST00000395667 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.12□□□□□ -0.47
CDRT1-203ENST00000395667 HECW2Q9P2P5 1572 aa12.12□□□□□ -0.47
CDRT1-203ENST00000395667 IPO9Q96P70 1041 aaKnown RBP12.11□□□□□ -0.47
CDRT1-203ENST00000395667 C14orf93Q9H972 538 aaKnown RBP12.11□□□□□ -0.47
CDRT1-203ENST00000395667 RAPGEF3O95398 923 aa12.11□□□□□ -0.47
CDRT1-203ENST00000395667 NPM2Q86SE8 214 aaKnown RBP12.11□□□□□ -0.47
CDRT1-203ENST00000395667 SLFN5Q08AF3 891 aa12.11□□□□□ -0.47
CDRT1-203ENST00000395667 FRMPD1Q5SYB0 1578 aa12.1□□□□□ -0.47
CDRT1-203ENST00000395667 PAK3O75914 559 aaPredicted RBP12.1□□□□□ -0.47
CDRT1-203ENST00000395667 NUTM2DQ5VT03 806 aaPredicted RBP12.1□□□□□ -0.47
CDRT1-203ENST00000395667 RPGRIP1LQ68CZ1 1315 aa12.1□□□□□ -0.47
CDRT1-203ENST00000395667 PDE4AP27815 886 aa12.1□□□□□ -0.47
CDRT1-203ENST00000395667 TNNT2P45379 298 aaPredicted RBP12.1□□□□□ -0.47
CDRT1-203ENST00000395667 MORC1Q86VD1 984 aa12.1□□□□□ -0.47
CDRT1-203ENST00000395667 ZBTB47Q9UFB7 747 aaPredicted RBP12.1□□□□□ -0.47
CDRT1-203ENST00000395667 MS4A1P11836 297 aa12.09□□□□□ -0.47
CDRT1-203ENST00000395667 SLC12A5Q9H2X9 1139 aa12.09□□□□□ -0.47
CDRT1-203ENST00000395667 SETBP1Q9Y6X0 1596 aa12.09□□□□□ -0.47
CDRT1-203ENST00000395667 MYO3AQ8NEV4 1616 aa12.09□□□□□ -0.47
CDRT1-203ENST00000395667 NSD3Q9BZ95 1437 aa12.09□□□□□ -0.47
CDRT1-203ENST00000395667 PPLO60437 1756 aa12.08□□□□□ -0.48
CDRT1-203ENST00000395667 ABCC3O15438 1527 aa12.08□□□□□ -0.48
CDRT1-203ENST00000395667 E9PSI1 815 aa12.07□□□□□ -0.48
CDRT1-203ENST00000395667 SPINK5Q9NQ38 1064 aaPredicted RBP12.07□□□□□ -0.48
CDRT1-203ENST00000395667 VGFO15240 615 aaPredicted RBP12.06□□□□□ -0.48
CDRT1-203ENST00000395667 SKAP1Q86WV1 359 aa12.06□□□□□ -0.48
CDRT1-203ENST00000395667 BACH2Q9BYV9 841 aa12.06□□□□□ -0.48
CDRT1-203ENST00000395667 QRICH2Q9H0J4 1663 aa12.06□□□□□ -0.48
CDRT1-203ENST00000395667 POLR3AO14802 1390 aaPredicted RBP12.06□□□□□ -0.48
CDRT1-203ENST00000395667 NGEFQ8N5V2 710 aa12.05□□□□□ -0.48
CDRT1-203ENST00000395667 NKTRP30414 1462 aaKnown RBP12.05□□□□□ -0.48
CDRT1-203ENST00000395667 NBR1Q14596 966 aa12.05□□□□□ -0.48
CDRT1-203ENST00000395667 TRMT2AQ8IZ69 625 aaKnown RBP12.05□□□□□ -0.48
CDRT1-203ENST00000395667 SENP3Q9H4L4 574 aaPredicted RBP12.05□□□□□ -0.48
CDRT1-203ENST00000395667 NEO1Q92859 1461 aa12.05□□□□□ -0.48
CDRT1-203ENST00000395667 ADGRB1O14514 1584 aa12.05□□□□□ -0.48
CDRT1-203ENST00000395667 CAMSAP1Q5T5Y3 1602 aa12.04□□□□□ -0.48
CDRT1-203ENST00000395667 CENPQQ7L2Z9 268 aaPredicted RBP12.04□□□□□ -0.48
CDRT1-203ENST00000395667 CGNL1Q0VF96 1302 aa12.04□□□□□ -0.48
CDRT1-203ENST00000395667 EVC2Q86UK5 1308 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms