RNA–Protein interactions for RNA: ENST00000390445.2

TRAV17-201, Transcript of T cell receptor alpha variable 17, humanhuman

APPRIS P1 BASIC

Gene TRAV17, Length 484 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV17-201ENST00000390445 CERKQ8TCT0 537 aa13.23□□□□□ -0.29
TRAV17-201ENST00000390445 DNMT1P26358 1616 aaKnown RBP13.22□□□□□ -0.29
TRAV17-201ENST00000390445 RNF17Q9BXT8 1623 aaKnown RBP13.22□□□□□ -0.29
TRAV17-201ENST00000390445 IFNL1Q8IU54 200 aa13.22□□□□□ -0.29
TRAV17-201ENST00000390445 PTPN23Q9H3S7 1636 aa13.21□□□□□ -0.29
TRAV17-201ENST00000390445 KIF3BO15066 747 aa13.21□□□□□ -0.29
TRAV17-201ENST00000390445 VGFO15240 615 aaPredicted RBP13.21□□□□□ -0.29
TRAV17-201ENST00000390445 CHGAP10645 457 aaKnown RBP13.21□□□□□ -0.29
TRAV17-201ENST00000390445 ZNF467Q7Z7K2 595 aaPredicted RBP13.21□□□□□ -0.29
TRAV17-201ENST00000390445 KDM5DQ9BY66 1539 aa13.21□□□□□ -0.29
TRAV17-201ENST00000390445 PTPRTO14522 1441 aa13.21□□□□□ -0.3
TRAV17-201ENST00000390445 MYOM3Q5VTT5 1437 aa13.21□□□□□ -0.3
TRAV17-201ENST00000390445 LTBP4Q8N2S1 1624 aa13.21□□□□□ -0.3
TRAV17-201ENST00000390445 EIF2AK4Q9P2K8 1649 aaKnown RBP13.21□□□□□ -0.3
TRAV17-201ENST00000390445 ZC3H13Q5T200 1668 aaKnown RBP13.2□□□□□ -0.3
TRAV17-201ENST00000390445 SGIP1Q9BQI5 828 aa13.19□□□□□ -0.3
TRAV17-201ENST00000390445 MROH1Q8NDA8 1641 aa13.19□□□□□ -0.3
TRAV17-201ENST00000390445 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.18□□□□□ -0.3
TRAV17-201ENST00000390445 ZFP91Q96JP5 570 aaPredicted RBP13.18□□□□□ -0.3
TRAV17-201ENST00000390445 NCKAP5LQ9HCH0 1330 aa13.17□□□□□ -0.3
TRAV17-201ENST00000390445 RSPH4AQ5TD94 716 aa13.17□□□□□ -0.3
TRAV17-201ENST00000390445 HS6ST3Q8IZP7 471 aa13.17□□□□□ -0.3
TRAV17-201ENST00000390445 FAM135AQ9P2D6 1515 aa13.17□□□□□ -0.3
TRAV17-201ENST00000390445 PZPP20742 1482 aa13.16□□□□□ -0.3
TRAV17-201ENST00000390445 MIA2Q96PC5 1412 aa13.16□□□□□ -0.3
TRAV17-201ENST00000390445 TSPY4P0CV99 314 aa13.16□□□□□ -0.3
TRAV17-201ENST00000390445 TSPY10P0CW01 314 aa13.16□□□□□ -0.3
TRAV17-201ENST00000390445 FBXO31Q5XUX0 539 aaPredicted RBP13.16□□□□□ -0.3
TRAV17-201ENST00000390445 MS4A3Q96HJ5 214 aa13.16□□□□□ -0.3
TRAV17-201ENST00000390445 A2ML1A8K2U0 1454 aa13.16□□□□□ -0.3
TRAV17-201ENST00000390445 PLA2R1Q13018 1463 aa13.16□□□□□ -0.3
TRAV17-201ENST00000390445 ABCC3O15438 1527 aa13.15□□□□□ -0.3
TRAV17-201ENST00000390445 TAOK2Q9UL54 1235 aa13.15□□□□□ -0.3
TRAV17-201ENST00000390445 TCOF1Q13428 1488 aaKnown RBP13.15□□□□□ -0.3
TRAV17-201ENST00000390445 NEURL4Q96JN8 1562 aa13.15□□□□□ -0.3
TRAV17-201ENST00000390445 WASHC2CQ9Y4E1 1318 aa13.13□□□□□ -0.31
TRAV17-201ENST00000390445 STK25O00506 426 aa13.13□□□□□ -0.31
TRAV17-201ENST00000390445 PDAP1Q13442 181 aaKnown RBP13.13□□□□□ -0.31
TRAV17-201ENST00000390445 DUOX2Q9NRD8 1548 aa13.13□□□□□ -0.31
TRAV17-201ENST00000390445 TNRQ92752 1358 aa13.12□□□□□ -0.31
TRAV17-201ENST00000390445 TRPC6Q9Y210 931 aa13.12□□□□□ -0.31
TRAV17-201ENST00000390445 ABCC5O15440 1437 aa13.12□□□□□ -0.31
TRAV17-201ENST00000390445 UBR1Q8IWV7 1749 aa13.11□□□□□ -0.31
TRAV17-201ENST00000390445 DEPDC5O75140 1603 aa13.11□□□□□ -0.31
TRAV17-201ENST00000390445 PSEN1P49768 467 aa13.11□□□□□ -0.31
TRAV17-201ENST00000390445 BCL11BQ9C0K0 894 aaPredicted RBP13.11□□□□□ -0.31
TRAV17-201ENST00000390445 SPATA31D1Q6ZQQ2 1576 aa13.11□□□□□ -0.31
TRAV17-201ENST00000390445 ZNF335Q9H4Z2 1342 aaPredicted RBP13.11□□□□□ -0.31
TRAV17-201ENST00000390445 SHANK2Q9UPX8 1470 aa13.1□□□□□ -0.31
TRAV17-201ENST00000390445 BBXQ8WY36 941 aaPredicted RBP13.1□□□□□ -0.31
TRAV17-201ENST00000390445 FGD6Q6ZV73 1430 aa13.1□□□□□ -0.31
TRAV17-201ENST00000390445 UGGT1Q9NYU2 1555 aa13.1□□□□□ -0.31
TRAV17-201ENST00000390445 STRCP1A6NGW2 1772 aa13.09□□□□□ -0.31
TRAV17-201ENST00000390445 PRDM15P57071 1507 aaPredicted RBP13.09□□□□□ -0.31
TRAV17-201ENST00000390445 GALR2O43603 387 aaPredicted RBP13.09□□□□□ -0.31
TRAV17-201ENST00000390445 DAPK1P53355 1430 aa13.09□□□□□ -0.31
TRAV17-201ENST00000390445 IQGAP1P46940 1657 aa13.08□□□□□ -0.31
TRAV17-201ENST00000390445 STK24Q9Y6E0 443 aa13.08□□□□□ -0.32
TRAV17-201ENST00000390445 ERVK-7P63135 1459 aa13.08□□□□□ -0.32
TRAV17-201ENST00000390445 MYO5BQ9ULV0 1848 aa13.07□□□□□ -0.32
TRAV17-201ENST00000390445 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.07□□□□□ -0.32
TRAV17-201ENST00000390445 KIF15Q9NS87 1388 aa13.07□□□□□ -0.32
TRAV17-201ENST00000390445 IQSEC2Q5JU85 1478 aa13.06□□□□□ -0.32
TRAV17-201ENST00000390445 NLRP1Q9C000 1473 aa13.06□□□□□ -0.32
TRAV17-201ENST00000390445 RRP7BPQ9NSQ0 103 aa13.06□□□□□ -0.32
TRAV17-201ENST00000390445 PIK3C2BO00750 1634 aa13.05□□□□□ -0.32
TRAV17-201ENST00000390445 ERBINQ96RT1 1412 aa13.05□□□□□ -0.32
TRAV17-201ENST00000390445 VWDEQ8N2E2 1590 aa13.04□□□□□ -0.32
TRAV17-201ENST00000390445 NKX1-1Q15270 411 aaPredicted RBP13.04□□□□□ -0.32
TRAV17-201ENST00000390445 CHIC2Q9UKJ5 165 aa13.04□□□□□ -0.32
TRAV17-201ENST00000390445 XIRP1Q702N8 1843 aaKnown RBP13.02□□□□□ -0.33
TRAV17-201ENST00000390445 PLCB2Q00722 1185 aa13.01□□□□□ -0.33
TRAV17-201ENST00000390445 MED14O60244 1454 aa13□□□□□ -0.33
TRAV17-201ENST00000390445 NPHP4O75161 1426 aaPredicted RBP13□□□□□ -0.33
TRAV17-201ENST00000390445 GABBR2O75899 941 aa13□□□□□ -0.33
TRAV17-201ENST00000390445 ZBTB4Q9P1Z0 1013 aaPredicted RBP13□□□□□ -0.33
TRAV17-201ENST00000390445 SYNMO15061 1565 aa12.99□□□□□ -0.33
TRAV17-201ENST00000390445 ANKRD30AQ9BXX3 1397 aa12.99□□□□□ -0.33
TRAV17-201ENST00000390445 ANKLE2Q86XL3 938 aa12.99□□□□□ -0.33
TRAV17-201ENST00000390445 THEMISQ8N1K5 641 aaPredicted RBP12.99□□□□□ -0.33
TRAV17-201ENST00000390445 GCC2Q8IWJ2 1684 aa12.99□□□□□ -0.33
TRAV17-201ENST00000390445 CPS1P31327 1500 aa12.98□□□□□ -0.33
TRAV17-201ENST00000390445 ADGRL2O95490 1459 aa12.98□□□□□ -0.33
TRAV17-201ENST00000390445 ARHGAP31Q2M1Z3 1444 aa12.98□□□□□ -0.33
TRAV17-201ENST00000390445 CLCN6P51797 869 aa12.98□□□□□ -0.33
TRAV17-201ENST00000390445 FAM50AQ14320 339 aaKnown RBP12.98□□□□□ -0.33
TRAV17-201ENST00000390445 TMEM106CQ9BVX2 250 aa12.98□□□□□ -0.33
TRAV17-201ENST00000390445 KDM5AP29375 1690 aaKnown RBP12.98□□□□□ -0.33
TRAV17-201ENST00000390445 EFCAB6Q5THR3 1501 aa12.98□□□□□ -0.33
TRAV17-201ENST00000390445 LMTK2Q8IWU2 1503 aa12.97□□□□□ -0.33
TRAV17-201ENST00000390445 TET3O43151 1660 aa12.96□□□□□ -0.33
TRAV17-201ENST00000390445 UBAP1LF5GYI3 381 aa12.96□□□□□ -0.33
TRAV17-201ENST00000390445 TIE1P35590 1138 aa12.96□□□□□ -0.33
TRAV17-201ENST00000390445 PAXIP1Q6ZW49 1069 aaPredicted RBP12.96□□□□□ -0.33
TRAV17-201ENST00000390445 CABP2Q9NPB3 220 aa12.96□□□□□ -0.33
TRAV17-201ENST00000390445 BMP2KQ9NSY1 1161 aaPredicted RBP12.96□□□□□ -0.33
TRAV17-201ENST00000390445 ALKQ9UM73 1620 aa12.95□□□□□ -0.34
TRAV17-201ENST00000390445 SLIT1O75093 1534 aa12.95□□□□□ -0.34
TRAV17-201ENST00000390445 TTLL13PA6NNM8 815 aa12.95□□□□□ -0.34
TRAV17-201ENST00000390445 ARHGAP23Q9P227 1491 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms