RNA–Protein interactions for RNA: ENST00000389975.7

VIT-203, Transcript of vitrin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VIT, Length 2,770 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIT-203ENST00000389975 ROCK1Q13464 1354 aa10.92□□□□□ -0.66
VIT-203ENST00000389975 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.92□□□□□ -0.66
VIT-203ENST00000389975 SPATA31E1Q6ZUB1 1445 aa10.92□□□□□ -0.66
VIT-203ENST00000389975 RNF216Q9NWF9 866 aaPredicted RBP10.92□□□□□ -0.66
VIT-203ENST00000389975 KCTD17Q8N5Z5 321 aa10.91□□□□□ -0.66
VIT-203ENST00000389975 BBXQ8WY36 941 aaPredicted RBP10.91□□□□□ -0.66
VIT-203ENST00000389975 PLCH2O75038 1416 aa10.91□□□□□ -0.66
VIT-203ENST00000389975 ARHGEF40Q8TER5 1519 aa10.91□□□□□ -0.66
VIT-203ENST00000389975 PPM1GO15355 546 aaPredicted RBP10.9□□□□□ -0.66
VIT-203ENST00000389975 BCORL1Q5H9F3 1711 aa10.9□□□□□ -0.66
VIT-203ENST00000389975 PIAS4Q8N2W9 510 aaPredicted RBP10.9□□□□□ -0.66
VIT-203ENST00000389975 GPATCH8Q9UKJ3 1502 aaKnown RBP10.9□□□□□ -0.66
VIT-203ENST00000389975 FRMPD1Q5SYB0 1578 aa10.9□□□□□ -0.66
VIT-203ENST00000389975 ADAMTSL3P82987 1691 aa10.9□□□□□ -0.66
VIT-203ENST00000389975 TROQ12816 1431 aaPredicted RBP10.89□□□□□ -0.67
VIT-203ENST00000389975 USP47Q96K76 1375 aa10.89□□□□□ -0.67
VIT-203ENST00000389975 ADGRL1O94910 1474 aa10.88□□□□□ -0.67
VIT-203ENST00000389975 ZBED9Q6R2W3 1325 aa10.87□□□□□ -0.67
VIT-203ENST00000389975 DHX29Q7Z478 1369 aaKnown RBP10.86□□□□□ -0.67
VIT-203ENST00000389975 FANCAO15360 1455 aa10.86□□□□□ -0.67
VIT-203ENST00000389975 KDM4AO75164 1064 aa10.86□□□□□ -0.67
VIT-203ENST00000389975 PREX2Q70Z35 1606 aa10.86□□□□□ -0.67
VIT-203ENST00000389975 KDM5CP41229 1560 aa10.86□□□□□ -0.67
VIT-203ENST00000389975 HNRNPMP52272 730 aaKnown RBP eCLIP10.86□□□□□ -0.67
VIT-203ENST00000389975 TTC37Q6PGP7 1564 aa10.86□□□□□ -0.67
VIT-203ENST00000389975 PPP4R2Q9NY27 417 aa10.86□□□□□ -0.67
VIT-203ENST00000389975 KIAA1107Q9UPP5 1409 aa10.86□□□□□ -0.67
VIT-203ENST00000389975 NUP155O75694 1391 aa10.86□□□□□ -0.67
VIT-203ENST00000389975 FTSJ3Q8IY81 847 aaKnown RBP10.85□□□□□ -0.67
VIT-203ENST00000389975 RGS22Q8NE09 1264 aa10.85□□□□□ -0.67
VIT-203ENST00000389975 POGZQ7Z3K3 1410 aa10.84□□□□□ -0.67
VIT-203ENST00000389975 ANKRD50Q9ULJ7 1429 aa10.84□□□□□ -0.67
VIT-203ENST00000389975 KDM4FA0A1W2PPD8 638 aa10.84□□□□□ -0.67
VIT-203ENST00000389975 MBD5Q9P267 1494 aa10.84□□□□□ -0.67
VIT-203ENST00000389975 CARD11Q9BXL7 1154 aa10.84□□□□□ -0.67
VIT-203ENST00000389975 PLEKHH2Q8IVE3 1493 aa10.84□□□□□ -0.67
VIT-203ENST00000389975 ADGBQ8N7X0 1667 aa10.84□□□□□ -0.67
VIT-203ENST00000389975 POLR1AO95602 1720 aaPredicted RBP10.84□□□□□ -0.67
VIT-203ENST00000389975 ANKRD30AQ9BXX3 1397 aa10.83□□□□□ -0.68
VIT-203ENST00000389975 DCAF11Q8TEB1 546 aa10.83□□□□□ -0.68
VIT-203ENST00000389975 ITSN2Q9NZM3 1697 aa10.83□□□□□ -0.68
VIT-203ENST00000389975 ZFYVE16Q7Z3T8 1539 aa10.83□□□□□ -0.68
VIT-203ENST00000389975 ST20-MTHFSA0A0A6YYL1 179 aa10.82□□□□□ -0.68
VIT-203ENST00000389975 CROCC2H7BZ55 1655 aa10.82□□□□□ -0.68
VIT-203ENST00000389975 AGLP35573 1532 aa10.82□□□□□ -0.68
VIT-203ENST00000389975 BRPF1P55201 1214 aaPredicted RBP10.82□□□□□ -0.68
VIT-203ENST00000389975 CCDC27Q2M243 656 aa10.82□□□□□ -0.68
VIT-203ENST00000389975 ZNF518AQ6AHZ1 1483 aa10.82□□□□□ -0.68
VIT-203ENST00000389975 FAM135AQ9P2D6 1515 aa10.82□□□□□ -0.68
VIT-203ENST00000389975 MLH3Q9UHC1 1453 aa10.81□□□□□ -0.68
VIT-203ENST00000389975 CDC42BPAQ5VT25 1732 aa10.81□□□□□ -0.68
VIT-203ENST00000389975 IL27Q8NEV9 243 aa10.81□□□□□ -0.68
VIT-203ENST00000389975 C9orf84Q5VXU9 1444 aa10.81□□□□□ -0.68
VIT-203ENST00000389975 RGL3Q3MIN7 710 aa10.81□□□□□ -0.68
VIT-203ENST00000389975 EFCAB2Q5VUJ9 269 aa10.81□□□□□ -0.68
VIT-203ENST00000389975 CC2D2BQ6DHV5 1058 aa10.81□□□□□ -0.68
VIT-203ENST00000389975 CDC42BPBQ9Y5S2 1711 aa10.81□□□□□ -0.68
VIT-203ENST00000389975 GTF2E1P29083 439 aaPredicted RBP10.8□□□□□ -0.68
VIT-203ENST00000389975 OS9Q13438 667 aaPredicted RBP10.8□□□□□ -0.68
VIT-203ENST00000389975 ADGRL2O95490 1459 aa10.79□□□□□ -0.68
VIT-203ENST00000389975 GRIPAP1Q4V328 841 aa10.79□□□□□ -0.68
VIT-203ENST00000389975 TMC1Q8TDI8 760 aa10.79□□□□□ -0.68
VIT-203ENST00000389975 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.79□□□□□ -0.68
VIT-203ENST00000389975 ATP10AO60312 1499 aa10.79□□□□□ -0.68
VIT-203ENST00000389975 TSPY4P0CV99 314 aa10.78□□□□□ -0.68
VIT-203ENST00000389975 TSPY10P0CW01 314 aa10.78□□□□□ -0.68
VIT-203ENST00000389975 ABCC1P33527 1531 aa10.78□□□□□ -0.68
VIT-203ENST00000389975 KIF15Q9NS87 1388 aa10.78□□□□□ -0.68
VIT-203ENST00000389975 HECW2Q9P2P5 1572 aa10.78□□□□□ -0.68
VIT-203ENST00000389975 PNISRQ8TF01 805 aaKnown RBP10.77□□□□□ -0.68
VIT-203ENST00000389975 ANAPC15P60006 121 aa10.77□□□□□ -0.69
VIT-203ENST00000389975 NUDCQ9Y266 331 aa10.77□□□□□ -0.69
VIT-203ENST00000389975 PATL2C9JE40 543 aaKnown RBP10.77□□□□□ -0.69
VIT-203ENST00000389975 ARHGEF12Q9NZN5 1544 aa10.76□□□□□ -0.69
VIT-203ENST00000389975 PTMSP20962 102 aa10.76□□□□□ -0.69
VIT-203ENST00000389975 NBPF1Q3BBV0 1214 aa10.76□□□□□ -0.69
VIT-203ENST00000389975 MROH2AA6NES4 1674 aa10.75□□□□□ -0.69
VIT-203ENST00000389975 SMG6Q86US8 1419 aaKnown RBP10.75□□□□□ -0.69
VIT-203ENST00000389975 RALGAPBQ86X10 1494 aa10.75□□□□□ -0.69
VIT-203ENST00000389975 ROCK2O75116 1388 aaKnown RBP10.75□□□□□ -0.69
VIT-203ENST00000389975 SCAPERQ9BY12 1400 aa10.74□□□□□ -0.69
VIT-203ENST00000389975 ARHGAP5Q13017 1502 aa10.74□□□□□ -0.69
VIT-203ENST00000389975 PTPRMP28827 1452 aa10.73□□□□□ -0.69
VIT-203ENST00000389975 RTEL1-TNFRSF6BF6WH68 1400 aa10.72□□□□□ -0.69
VIT-203ENST00000389975 UHRF1BP1Q6BDS2 1440 aa10.72□□□□□ -0.69
VIT-203ENST00000389975 FER1L4A9Z1Z3 1794 aa10.72□□□□□ -0.69
VIT-203ENST00000389975 FAM193AP78312 1265 aa10.72□□□□□ -0.69
VIT-203ENST00000389975 CC2D1BQ5T0F9 858 aaKnown RBP10.72□□□□□ -0.69
VIT-203ENST00000389975 PAK3O75914 559 aaPredicted RBP10.71□□□□□ -0.69
VIT-203ENST00000389975 DIP2CQ9Y2E4 1556 aa10.71□□□□□ -0.69
VIT-203ENST00000389975 SAMD9LQ8IVG5 1584 aa10.71□□□□□ -0.7
VIT-203ENST00000389975 SETD1BQ9UPS6 1966 aaKnown RBP10.7□□□□□ -0.7
VIT-203ENST00000389975 MADDQ8WXG6 1647 aa10.7□□□□□ -0.7
VIT-203ENST00000389975 CANXP27824 592 aaKnown RBP10.7□□□□□ -0.7
VIT-203ENST00000389975 GPATCH11Q8N954 259 aa10.7□□□□□ -0.7
VIT-203ENST00000389975 INO80Q9ULG1 1556 aaPredicted RBP10.7□□□□□ -0.7
VIT-203ENST00000389975 CDCA7LQ96GN5 454 aa10.7□□□□□ -0.7
VIT-203ENST00000389975 MYBBP1AQ9BQG0 1328 aaKnown RBP10.69□□□□□ -0.7
VIT-203ENST00000389975 SHANK2Q9UPX8 1470 aa10.69□□□□□ -0.7
VIT-203ENST00000389975 SYCP2Q9BX26 1530 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms