RNA–Protein interactions for RNA: ENST00000389138.7

ERCC4-202, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 2

Gene ERCC4, Length 2,106 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-202ENST00000389138 TBC1D12O60347 775 aa8.39□□□□□ -1.07
ERCC4-202ENST00000389138 PDE4DQ08499 809 aa8.39□□□□□ -1.07
ERCC4-202ENST00000389138 CCDC125Q86Z20 511 aa8.39□□□□□ -1.07
ERCC4-202ENST00000389138 SOGA1O94964 1423 aa8.39□□□□□ -1.07
ERCC4-202ENST00000389138 SHROOM2Q13796 1616 aa8.38□□□□□ -1.07
ERCC4-202ENST00000389138 RIMBP2O15034 1052 aa8.38□□□□□ -1.07
ERCC4-202ENST00000389138 BRPF3Q9ULD4 1205 aa8.38□□□□□ -1.07
ERCC4-202ENST00000389138 CEP170Q5SW79 1584 aa8.38□□□□□ -1.07
ERCC4-202ENST00000389138 HECW2Q9P2P5 1572 aa8.37□□□□□ -1.07
ERCC4-202ENST00000389138 TRIM66O15016 1216 aa8.37□□□□□ -1.07
ERCC4-202ENST00000389138 CERS3Q8IU89 383 aa8.37□□□□□ -1.07
ERCC4-202ENST00000389138 PTCD2Q8WV60 388 aaKnown RBP8.37□□□□□ -1.07
ERCC4-202ENST00000389138 ZSWIM6Q9HCJ5 1215 aa8.37□□□□□ -1.07
ERCC4-202ENST00000389138 PCDH10Q9P2E7 1040 aa8.37□□□□□ -1.07
ERCC4-202ENST00000389138 DIP2BQ9P265 1576 aa8.37□□□□□ -1.07
ERCC4-202ENST00000389138 FGD5Q6ZNL6 1462 aa8.37□□□□□ -1.07
ERCC4-202ENST00000389138 OXER1Q8TDS5 423 aa8.36□□□□□ -1.07
ERCC4-202ENST00000389138 TSPOAP1O95153 1857 aa8.36□□□□□ -1.07
ERCC4-202ENST00000389138 EMILIN3Q9NT22 766 aa8.35□□□□□ -1.07
ERCC4-202ENST00000389138 UNCXA6NJT0 531 aa8.35□□□□□ -1.07
ERCC4-202ENST00000389138 SPDYE16A6NNV3 312 aaPredicted RBP8.35□□□□□ -1.07
ERCC4-202ENST00000389138 MAP3K9P80192 1104 aa8.35□□□□□ -1.07
ERCC4-202ENST00000389138 IGSF5Q9NSI5 407 aa8.35□□□□□ -1.07
ERCC4-202ENST00000389138 ABCA5Q8WWZ7 1642 aa8.34□□□□□ -1.07
ERCC4-202ENST00000389138 HOXB3P14651 431 aaPredicted RBP8.34□□□□□ -1.07
ERCC4-202ENST00000389138 SERPINA10Q9UK55 444 aa8.34□□□□□ -1.07
ERCC4-202ENST00000389138 AMOTL2Q9Y2J4 779 aa8.34□□□□□ -1.07
ERCC4-202ENST00000389138 ABCC10Q5T3U5 1492 aa8.34□□□□□ -1.07
ERCC4-202ENST00000389138 FNBP4Q8N3X1 1017 aaPredicted RBP8.33□□□□□ -1.08
ERCC4-202ENST00000389138 ZNF710Q8N1W2 664 aa8.33□□□□□ -1.08
ERCC4-202ENST00000389138 MAPKBP1O60336 1514 aa8.33□□□□□ -1.08
ERCC4-202ENST00000389138 ZNF592Q92610 1267 aa8.32□□□□□ -1.08
ERCC4-202ENST00000389138 UPF1Q92900 1129 aaKnown RBP eCLIP8.32□□□□□ -1.08
ERCC4-202ENST00000389138 CCDC97Q96F63 343 aaPredicted RBP8.32□□□□□ -1.08
ERCC4-202ENST00000389138 PCDHGA4Q9Y5G9 962 aa8.32□□□□□ -1.08
ERCC4-202ENST00000389138 DPYSL4O14531 572 aa8.31□□□□□ -1.08
ERCC4-202ENST00000389138 TMED8Q6PL24 325 aaPredicted RBP8.31□□□□□ -1.08
ERCC4-202ENST00000389138 ADGRL1O94910 1474 aa8.31□□□□□ -1.08
ERCC4-202ENST00000389138 GRIN2AQ12879 1464 aa8.31□□□□□ -1.08
ERCC4-202ENST00000389138 CUX1P39880 1505 aa8.3□□□□□ -1.08
ERCC4-202ENST00000389138 ADAMTS12P58397 1594 aa8.3□□□□□ -1.08
ERCC4-202ENST00000389138 KRI1Q8N9T8 703 aaKnown RBP8.3□□□□□ -1.08
ERCC4-202ENST00000389138 NUP160Q12769 1436 aa8.29□□□□□ -1.08
ERCC4-202ENST00000389138 PDIA6Q15084 440 aa8.29□□□□□ -1.08
ERCC4-202ENST00000389138 POM121Q96HA1 1249 aa8.29□□□□□ -1.08
ERCC4-202ENST00000389138 MCM6Q14566 821 aa8.29□□□□□ -1.08
ERCC4-202ENST00000389138 PROSER2Q86WR7 435 aaPredicted RBP8.29□□□□□ -1.08
ERCC4-202ENST00000389138 BCCIPQ9P287 314 aaKnown RBP eCLIP8.28□□□□□ -1.08
ERCC4-202ENST00000389138 ADCY10Q96PN6 1610 aa8.28□□□□□ -1.08
ERCC4-202ENST00000389138 EVI5O60447 810 aa8.27□□□□□ -1.08
ERCC4-202ENST00000389138 IRX6P78412 446 aaPredicted RBP8.27□□□□□ -1.08
ERCC4-202ENST00000389138 FAM69CQ0P6D2 419 aa8.27□□□□□ -1.08
ERCC4-202ENST00000389138 BCL11AQ9H165 835 aa8.27□□□□□ -1.08
ERCC4-202ENST00000389138 RBM26Q5T8P6 1007 aaKnown RBP8.27□□□□□ -1.09
ERCC4-202ENST00000389138 GPR153Q6NV75 609 aa8.27□□□□□ -1.09
ERCC4-202ENST00000389138 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.27□□□□□ -1.09
ERCC4-202ENST00000389138 HOXB1P14653 301 aaPredicted RBP8.26□□□□□ -1.09
ERCC4-202ENST00000389138 PPRC1Q5VV67 1664 aaKnown RBP8.26□□□□□ -1.09
ERCC4-202ENST00000389138 ANO8Q9HCE9 1232 aaPredicted RBP8.26□□□□□ -1.09
ERCC4-202ENST00000389138 ARID4BQ4LE39 1312 aaPredicted RBP8.26□□□□□ -1.09
ERCC4-202ENST00000389138 SMARCA5O60264 1052 aaPredicted RBP8.26□□□□□ -1.09
ERCC4-202ENST00000389138 FBXO41Q8TF61 875 aa8.26□□□□□ -1.09
ERCC4-202ENST00000389138 KDM4AO75164 1064 aa8.25□□□□□ -1.09
ERCC4-202ENST00000389138 PTGER2P43116 358 aa8.25□□□□□ -1.09
ERCC4-202ENST00000389138 ARSIQ5FYB1 569 aa8.25□□□□□ -1.09
ERCC4-202ENST00000389138 ABCA10Q8WWZ4 1543 aa8.25□□□□□ -1.09
ERCC4-202ENST00000389138 SMYD5Q6GMV2 418 aa8.24□□□□□ -1.09
ERCC4-202ENST00000389138 CC2D2BQ6DHV5 1058 aa8.23□□□□□ -1.09
ERCC4-202ENST00000389138 TICAM2Q86XR7 235 aa8.23□□□□□ -1.09
ERCC4-202ENST00000389138 PSMD1Q99460 953 aa8.23□□□□□ -1.09
ERCC4-202ENST00000389138 CCDC27Q2M243 656 aa8.23□□□□□ -1.09
ERCC4-202ENST00000389138 PSDA5PKW4 1024 aaPredicted RBP8.22□□□□□ -1.09
ERCC4-202ENST00000389138 DDRGK1Q96HY6 314 aa8.21□□□□□ -1.09
ERCC4-202ENST00000389138 PRG4Q92954 1404 aaPredicted RBP8.21□□□□□ -1.09
ERCC4-202ENST00000389138 POTEMA6NI47 508 aa8.21□□□□□ -1.1
ERCC4-202ENST00000389138 NUDT7P0C024 238 aa8.21□□□□□ -1.1
ERCC4-202ENST00000389138 RUSC2Q8N2Y8 1516 aa8.21□□□□□ -1.1
ERCC4-202ENST00000389138 LMTK3Q96Q04 1460 aa8.2□□□□□ -1.1
ERCC4-202ENST00000389138 ST18O60284 1047 aa8.2□□□□□ -1.1
ERCC4-202ENST00000389138 FAM163AQ96GL9 167 aaPredicted RBP8.2□□□□□ -1.1
ERCC4-202ENST00000389138 GPIHBP1Q8IV16 184 aa8.2□□□□□ -1.1
ERCC4-202ENST00000389138 KHSRPQ92945 711 aaKnown RBP eCLIP8.2□□□□□ -1.1
ERCC4-202ENST00000389138 PRDM16Q9HAZ2 1276 aa8.2□□□□□ -1.1
ERCC4-202ENST00000389138 EPAS1Q99814 870 aa8.19□□□□□ -1.1
ERCC4-202ENST00000389138 PHF14O94880 888 aa8.18□□□□□ -1.1
ERCC4-202ENST00000389138 POTEGQ6S5H5 508 aa8.18□□□□□ -1.1
ERCC4-202ENST00000389138 JPH4Q96JJ6 628 aa8.18□□□□□ -1.1
ERCC4-202ENST00000389138 NEFLP07196 543 aa8.18□□□□□ -1.1
ERCC4-202ENST00000389138 SPATA32Q96LK8 384 aa8.18□□□□□ -1.1
ERCC4-202ENST00000389138 KIAA1522Q9P206 1035 aaPredicted RBP8.18□□□□□ -1.1
ERCC4-202ENST00000389138 TOP2BQ02880 1626 aa8.18□□□□□ -1.1
ERCC4-202ENST00000389138 FHAD1B1AJZ9 1412 aa8.18□□□□□ -1.1
ERCC4-202ENST00000389138 CLSTN1O94985 981 aa8.17□□□□□ -1.1
ERCC4-202ENST00000389138 GOPCQ9HD26 462 aa8.17□□□□□ -1.1
ERCC4-202ENST00000389138 CARNS1A5YM72 827 aa8.17□□□□□ -1.1
ERCC4-202ENST00000389138 LHX6Q9UPM6 363 aa8.17□□□□□ -1.1
ERCC4-202ENST00000389138 GLI2P10070 1586 aa8.16□□□□□ -1.1
ERCC4-202ENST00000389138 GRXCR2A6NFK2 248 aa8.15□□□□□ -1.1
ERCC4-202ENST00000389138 BRD1O95696 1058 aa8.15□□□□□ -1.1
ERCC4-202ENST00000389138 FOSBP53539 338 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms