RNA–Protein interactions for RNA: ENST00000383836.7

SRGAP3-202, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP3, Length 8,656 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-202ENST00000383836 BCL11BQ9C0K0 894 aaPredicted RBP15.05■□□□□ -0
SRGAP3-202ENST00000383836 DDX19BQ9UMR2 479 aa15.04■□□□□ -0
SRGAP3-202ENST00000383836 HSP90AB3PQ58FF7 597 aa15.04■□□□□ -0
SRGAP3-202ENST00000383836 ZKSCAN1P17029 563 aaPredicted RBP15.04■□□□□ -0
SRGAP3-202ENST00000383836 RUFY2Q8WXA3 655 aa15.04■□□□□ -0
SRGAP3-202ENST00000383836 COG6Q9Y2V7 657 aa15.04■□□□□ -0
SRGAP3-202ENST00000383836 CAVIN1Q6NZI2 390 aaKnown RBP15.04■□□□□ -0
SRGAP3-202ENST00000383836 TSPY26PQ9H489 355 aa15.03■□□□□ -0
SRGAP3-202ENST00000383836 DEF6Q9H4E7 631 aa15.03■□□□□ -0
SRGAP3-202ENST00000383836 FRAT2O75474 233 aaPredicted RBP15.03■□□□□ -0
SRGAP3-202ENST00000383836 EIF4G1Q04637 1599 aaKnown RBP15.03■□□□□ -0
SRGAP3-202ENST00000383836 MBD3O95983 291 aa15.03■□□□□ -0
SRGAP3-202ENST00000383836 SAFB2Q14151 953 aaKnown RBP eCLIP15.03■□□□□ -0
SRGAP3-202ENST00000383836 INTS3Q68E01 1043 aaKnown RBP15.03■□□□□ -0
SRGAP3-202ENST00000383836 USP8P40818 1118 aa15.03■□□□□ -0
SRGAP3-202ENST00000383836 UBE2Q2Q8WVN8 375 aa15.02■□□□□ -0
SRGAP3-202ENST00000383836 SMC3Q9UQE7 1217 aa15.02□□□□□ -0.01
SRGAP3-202ENST00000383836 SOGA1O94964 1423 aa15.02□□□□□ -0.01
SRGAP3-202ENST00000383836 RNF214Q8ND24 703 aa15.01□□□□□ -0.01
SRGAP3-202ENST00000383836 AKAP17AQ02040 695 aaKnown RBP15.01□□□□□ -0.01
SRGAP3-202ENST00000383836 AAMPQ13685 434 aa15.01□□□□□ -0.01
SRGAP3-202ENST00000383836 TRIM29Q14134 588 aa15.01□□□□□ -0.01
SRGAP3-202ENST00000383836 CCDC73Q6ZRK6 1079 aa15□□□□□ -0.01
SRGAP3-202ENST00000383836 CAGE1Q8TC20 777 aa15□□□□□ -0.01
SRGAP3-202ENST00000383836 BCL2L13Q9BXK5 485 aa15□□□□□ -0.01
SRGAP3-202ENST00000383836 TSPYL1Q9H0U9 437 aa15□□□□□ -0.01
SRGAP3-202ENST00000383836 KIAA0754O94854 1291 aa15□□□□□ -0.01
SRGAP3-202ENST00000383836 L3MBTL2Q969R5 705 aa15□□□□□ -0.01
SRGAP3-202ENST00000383836 TRIM5Q9C035 493 aa15□□□□□ -0.01
SRGAP3-202ENST00000383836 ANO2Q9NQ90 1003 aa15□□□□□ -0.01
SRGAP3-202ENST00000383836 ROCK1Q13464 1354 aa15□□□□□ -0.01
SRGAP3-202ENST00000383836 DHX57Q6P158 1386 aaKnown RBP15□□□□□ -0.01
SRGAP3-202ENST00000383836 GRPEL1Q9HAV7 217 aa15□□□□□ -0.01
SRGAP3-202ENST00000383836 MARCH6O60337 910 aa14.99□□□□□ -0.01
SRGAP3-202ENST00000383836 VPS37CA5D8V6 355 aaPredicted RBP14.99□□□□□ -0.01
SRGAP3-202ENST00000383836 KANK4Q5T7N3 995 aaPredicted RBP14.99□□□□□ -0.01
SRGAP3-202ENST00000383836 TOP2AP11388 1531 aaKnown RBP14.99□□□□□ -0.01
SRGAP3-202ENST00000383836 CPLX2Q6PUV4 134 aaKnown RBP14.98□□□□□ -0.01
SRGAP3-202ENST00000383836 CCDC47Q96A33 483 aaKnown RBP14.98□□□□□ -0.01
SRGAP3-202ENST00000383836 TOMM22Q9NS69 142 aa14.98□□□□□ -0.01
SRGAP3-202ENST00000383836 NAP1L1P55209 391 aaKnown RBP14.98□□□□□ -0.01
SRGAP3-202ENST00000383836 MYO6Q9UM54 1294 aa14.98□□□□□ -0.01
SRGAP3-202ENST00000383836 RNF20Q5VTR2 975 aa14.98□□□□□ -0.01
SRGAP3-202ENST00000383836 FBXW7Q969H0 707 aa14.98□□□□□ -0.01
SRGAP3-202ENST00000383836 ESPNB1AK53 854 aa14.97□□□□□ -0.01
SRGAP3-202ENST00000383836 AXDND1Q5T1B0 1012 aaPredicted RBP14.97□□□□□ -0.01
SRGAP3-202ENST00000383836 OLFM4Q6UX06 510 aa14.97□□□□□ -0.01
SRGAP3-202ENST00000383836 RRP7AQ9Y3A4 280 aaKnown RBP14.97□□□□□ -0.01
SRGAP3-202ENST00000383836 PAK3O75914 559 aaPredicted RBP14.97□□□□□ -0.01
SRGAP3-202ENST00000383836 TERF2IPQ9NYB0 399 aa14.97□□□□□ -0.01
SRGAP3-202ENST00000383836 NUP155O75694 1391 aa14.97□□□□□ -0.01
SRGAP3-202ENST00000383836 LRRFIP1Q32MZ4 808 aaKnown RBP14.96□□□□□ -0.01
SRGAP3-202ENST00000383836 PLCD4Q9BRC7 762 aa14.96□□□□□ -0.01
SRGAP3-202ENST00000383836 ABCC8Q09428 1581 aa14.96□□□□□ -0.01
SRGAP3-202ENST00000383836 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.96□□□□□ -0.01
SRGAP3-202ENST00000383836 SYNE3Q6ZMZ3 975 aa14.96□□□□□ -0.01
SRGAP3-202ENST00000383836 DHX8Q14562 1220 aaKnown RBP14.96□□□□□ -0.01
SRGAP3-202ENST00000383836 TRHP20396 242 aaPredicted RBP14.96□□□□□ -0.02
SRGAP3-202ENST00000383836 HDGFP51858 240 aaKnown RBP14.96□□□□□ -0.02
SRGAP3-202ENST00000383836 CCDC112Q8NEF3 446 aa14.95□□□□□ -0.02
SRGAP3-202ENST00000383836 DCAF8L1A6NGE4 600 aa14.95□□□□□ -0.02
SRGAP3-202ENST00000383836 NGEFQ8N5V2 710 aa14.95□□□□□ -0.02
SRGAP3-202ENST00000383836 PDILTQ8N807 584 aa14.95□□□□□ -0.02
SRGAP3-202ENST00000383836 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.95□□□□□ -0.02
SRGAP3-202ENST00000383836 EIF3JO75822 258 aaKnown RBP14.95□□□□□ -0.02
SRGAP3-202ENST00000383836 DZIP1LQ8IYY4 767 aaKnown RBP14.95□□□□□ -0.02
SRGAP3-202ENST00000383836 GOLGA6L7A0A1B0GV03 622 aa14.94□□□□□ -0.02
SRGAP3-202ENST00000383836 CT47B1P0C2W7 299 aaPredicted RBP14.94□□□□□ -0.02
SRGAP3-202ENST00000383836 CPLX1O14810 134 aa14.94□□□□□ -0.02
SRGAP3-202ENST00000383836 VPS53Q5VIR6 699 aa14.94□□□□□ -0.02
SRGAP3-202ENST00000383836 STK26Q9P289 416 aa14.94□□□□□ -0.02
SRGAP3-202ENST00000383836 ERICH4A6NGS2 130 aa14.93□□□□□ -0.02
SRGAP3-202ENST00000383836 CUX1P39880 1505 aa14.93□□□□□ -0.02
SRGAP3-202ENST00000383836 PDCL3Q9H2J4 239 aa14.93□□□□□ -0.02
SRGAP3-202ENST00000383836 KIF7Q2M1P5 1343 aa14.93□□□□□ -0.02
SRGAP3-202ENST00000383836 ANKRD30AQ9BXX3 1397 aa14.93□□□□□ -0.02
SRGAP3-202ENST00000383836 PDCL2Q8N4E4 241 aa14.93□□□□□ -0.02
SRGAP3-202ENST00000383836 MAPK8IP2Q13387 824 aaPredicted RBP14.92□□□□□ -0.02
SRGAP3-202ENST00000383836 PANK3Q9H999 370 aa14.92□□□□□ -0.02
SRGAP3-202ENST00000383836 USP47Q96K76 1375 aa14.92□□□□□ -0.02
SRGAP3-202ENST00000383836 SPC24Q8NBT2 197 aa14.92□□□□□ -0.02
SRGAP3-202ENST00000383836 GOLGA6L10A6NI86 522 aa14.92□□□□□ -0.02
SRGAP3-202ENST00000383836 SMC2O95347 1197 aa14.91□□□□□ -0.02
SRGAP3-202ENST00000383836 ZRSR2Q15696 482 aaKnown RBP14.91□□□□□ -0.02
SRGAP3-202ENST00000383836 PRPF40AO75400 957 aaKnown RBP14.91□□□□□ -0.02
SRGAP3-202ENST00000383836 INCENPQ9NQS7 918 aa14.91□□□□□ -0.02
SRGAP3-202ENST00000383836 CARMIL1Q5VZK9 1371 aa14.91□□□□□ -0.02
SRGAP3-202ENST00000383836 KIF21BO75037 1637 aa14.91□□□□□ -0.02
SRGAP3-202ENST00000383836 CDC45O75419 566 aa14.9□□□□□ -0.02
SRGAP3-202ENST00000383836 SKIDA1Q1XH10 827 aa14.9□□□□□ -0.02
SRGAP3-202ENST00000383836 ERLIN1O75477 346 aa14.9□□□□□ -0.02
SRGAP3-202ENST00000383836 ZNF330Q9Y3S2 320 aaPredicted RBP14.9□□□□□ -0.02
SRGAP3-202ENST00000383836 SMARCE1Q969G3 411 aa14.9□□□□□ -0.02
SRGAP3-202ENST00000383836 SDF4Q9BRK5 362 aa14.89□□□□□ -0.03
SRGAP3-202ENST00000383836 MCM2P49736 904 aa14.89□□□□□ -0.03
SRGAP3-202ENST00000383836 DYDC1Q8WWB3 177 aa14.89□□□□□ -0.03
SRGAP3-202ENST00000383836 KINO60870 393 aaKnown RBP14.89□□□□□ -0.03
SRGAP3-202ENST00000383836 GIMAP7Q8NHV1 300 aa14.89□□□□□ -0.03
SRGAP3-202ENST00000383836 CCDC192P0DO97 292 aa14.88□□□□□ -0.03
SRGAP3-202ENST00000383836 TTLL5Q6EMB2 1281 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms