RNA–Protein interactions for RNA: ENST00000376266.9

CCHCR1-201, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCHCR1, Length 2,625 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-201ENST00000376266 SLC52A1Q9NWF4 448 aa20.57■□□□□ 0.88
CCHCR1-201ENST00000376266 PPP4R2Q9NY27 417 aa20.56■□□□□ 0.88
CCHCR1-201ENST00000376266 CHGAP10645 457 aaKnown RBP20.55■□□□□ 0.88
CCHCR1-201ENST00000376266 ERICH6BQ5W0A0 696 aa20.55■□□□□ 0.88
CCHCR1-201ENST00000376266 RGL3Q3MIN7 710 aa20.54■□□□□ 0.88
CCHCR1-201ENST00000376266 PIK3C2BO00750 1634 aa20.54■□□□□ 0.88
CCHCR1-201ENST00000376266 TONSLQ96HA7 1378 aa20.5■□□□□ 0.87
CCHCR1-201ENST00000376266 SPATA31E1Q6ZUB1 1445 aa20.5■□□□□ 0.87
CCHCR1-201ENST00000376266 NBR1Q14596 966 aa20.49■□□□□ 0.87
CCHCR1-201ENST00000376266 STAG3Q9UJ98 1225 aa20.49■□□□□ 0.87
CCHCR1-201ENST00000376266 L3MBTL2Q969R5 705 aa20.49■□□□□ 0.87
CCHCR1-201ENST00000376266 NOP58Q9Y2X3 529 aaKnown RBP20.49■□□□□ 0.87
CCHCR1-201ENST00000376266 KIF1BO60333 1816 aa20.48■□□□□ 0.87
CCHCR1-201ENST00000376266 ZNF326Q5BKZ1 582 aaKnown RBP20.47■□□□□ 0.87
CCHCR1-201ENST00000376266 NLRP1Q9C000 1473 aa20.46■□□□□ 0.87
CCHCR1-201ENST00000376266 ADGRB3O60242 1522 aa20.45■□□□□ 0.86
CCHCR1-201ENST00000376266 MYO3AQ8NEV4 1616 aa20.45■□□□□ 0.86
CCHCR1-201ENST00000376266 TMEM131LA2VDJ0 1609 aa20.45■□□□□ 0.86
CCHCR1-201ENST00000376266 SETD1BQ9UPS6 1966 aaKnown RBP20.44■□□□□ 0.86
CCHCR1-201ENST00000376266 DCAF11Q8TEB1 546 aa20.44■□□□□ 0.86
CCHCR1-201ENST00000376266 ANO8Q9HCE9 1232 aaPredicted RBP20.43■□□□□ 0.86
CCHCR1-201ENST00000376266 KDM2AQ9Y2K7 1162 aa20.43■□□□□ 0.86
CCHCR1-201ENST00000376266 MYO5BQ9ULV0 1848 aa20.43■□□□□ 0.86
CCHCR1-201ENST00000376266 A2ML1A8K2U0 1454 aa20.43■□□□□ 0.86
CCHCR1-201ENST00000376266 B4GALNT3Q6L9W6 998 aa20.42■□□□□ 0.86
CCHCR1-201ENST00000376266 NUTM2DQ5VT03 806 aaPredicted RBP20.4■□□□□ 0.86
CCHCR1-201ENST00000376266 NEURL4Q96JN8 1562 aa20.4■□□□□ 0.86
CCHCR1-201ENST00000376266 UBR1Q8IWV7 1749 aa20.4■□□□□ 0.86
CCHCR1-201ENST00000376266 CEP170BQ9Y4F5 1589 aaPredicted RBP20.4■□□□□ 0.86
CCHCR1-201ENST00000376266 UHRF1BP1Q6BDS2 1440 aa20.39■□□□□ 0.85
CCHCR1-201ENST00000376266 PAK3O75914 559 aaPredicted RBP20.39■□□□□ 0.85
CCHCR1-201ENST00000376266 THEMISQ8N1K5 641 aaPredicted RBP20.37■□□□□ 0.85
CCHCR1-201ENST00000376266 RPGRIP1LQ68CZ1 1315 aa20.35■□□□□ 0.85
CCHCR1-201ENST00000376266 KDM5AP29375 1690 aaKnown RBP20.35■□□□□ 0.85
CCHCR1-201ENST00000376266 ZNF142P52746 1687 aaPredicted RBP20.34■□□□□ 0.85
CCHCR1-201ENST00000376266 SENP3Q9H4L4 574 aaPredicted RBP20.34■□□□□ 0.85
CCHCR1-201ENST00000376266 NEXMIFQ5QGS0 1516 aa20.34■□□□□ 0.85
CCHCR1-201ENST00000376266 TMEM2Q9UHN6 1383 aa20.34■□□□□ 0.85
CCHCR1-201ENST00000376266 ADGRF5Q8IZF2 1346 aa20.33■□□□□ 0.85
CCHCR1-201ENST00000376266 RIMS2Q9UQ26 1411 aa20.33■□□□□ 0.85
CCHCR1-201ENST00000376266 RTL5Q5HYW3 569 aaPredicted RBP20.33■□□□□ 0.84
CCHCR1-201ENST00000376266 NBPF8Q3BBV2 869 aa20.32■□□□□ 0.84
CCHCR1-201ENST00000376266 PPLO60437 1756 aa20.32■□□□□ 0.84
CCHCR1-201ENST00000376266 ZFYVE9O95405 1425 aa20.31■□□□□ 0.84
CCHCR1-201ENST00000376266 IFT172Q9UG01 1749 aa20.31■□□□□ 0.84
CCHCR1-201ENST00000376266 VGFO15240 615 aaPredicted RBP20.3■□□□□ 0.84
CCHCR1-201ENST00000376266 LTKP29376 864 aa20.3■□□□□ 0.84
CCHCR1-201ENST00000376266 TXNDC2Q86VQ3 553 aa20.29■□□□□ 0.84
CCHCR1-201ENST00000376266 HSPA2P54652 639 aa20.28■□□□□ 0.84
CCHCR1-201ENST00000376266 STAC3Q96MF2 364 aa20.28■□□□□ 0.84
CCHCR1-201ENST00000376266 SLIT1O75093 1534 aa20.28■□□□□ 0.84
CCHCR1-201ENST00000376266 SALL2Q9Y467 1007 aaPredicted RBP20.28■□□□□ 0.84
CCHCR1-201ENST00000376266 MYOM2P54296 1465 aa20.27■□□□□ 0.84
CCHCR1-201ENST00000376266 LMTK3Q96Q04 1460 aa20.27■□□□□ 0.84
CCHCR1-201ENST00000376266 ARHGAP23Q9P227 1491 aa20.27■□□□□ 0.84
CCHCR1-201ENST00000376266 HDGFP51858 240 aaKnown RBP20.27■□□□□ 0.84
CCHCR1-201ENST00000376266 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.27■□□□□ 0.84
CCHCR1-201ENST00000376266 PRAG1Q86YV5 1406 aa20.27■□□□□ 0.84
CCHCR1-201ENST00000376266 ANP32AP39687 249 aaKnown RBP20.27■□□□□ 0.84
CCHCR1-201ENST00000376266 EID1Q9Y6B2 187 aa20.27■□□□□ 0.84
CCHCR1-201ENST00000376266 FAM9BQ8IZU0 186 aa20.25■□□□□ 0.83
CCHCR1-201ENST00000376266 IPO9Q96P70 1041 aaKnown RBP20.25■□□□□ 0.83
CCHCR1-201ENST00000376266 CCDC184Q52MB2 194 aa20.24■□□□□ 0.83
CCHCR1-201ENST00000376266 NRXN1Q9ULB1 1477 aa20.24■□□□□ 0.83
CCHCR1-201ENST00000376266 ANKLE2Q86XL3 938 aa20.23■□□□□ 0.83
CCHCR1-201ENST00000376266 ZBTB47Q9UFB7 747 aaPredicted RBP20.23■□□□□ 0.83
CCHCR1-201ENST00000376266 PIK3C2GO75747 1445 aa20.23■□□□□ 0.83
CCHCR1-201ENST00000376266 WASHC2AQ641Q2 1341 aa20.22■□□□□ 0.83
CCHCR1-201ENST00000376266 CFAP70Q5T0N1 1121 aa20.22■□□□□ 0.83
CCHCR1-201ENST00000376266 SCAF11Q99590 1463 aaKnown RBP20.22■□□□□ 0.83
CCHCR1-201ENST00000376266 NBPF1Q3BBV0 1214 aa20.21■□□□□ 0.83
CCHCR1-201ENST00000376266 ZBED9Q6R2W3 1325 aa20.21■□□□□ 0.83
CCHCR1-201ENST00000376266 NCKAP5LQ9HCH0 1330 aa20.21■□□□□ 0.83
CCHCR1-201ENST00000376266 HSPA5P11021 654 aaKnown RBP20.19■□□□□ 0.82
CCHCR1-201ENST00000376266 PLEKHG1Q9ULL1 1385 aa20.18■□□□□ 0.82
CCHCR1-201ENST00000376266 IL27Q8NEV9 243 aa20.18■□□□□ 0.82
CCHCR1-201ENST00000376266 C14orf93Q9H972 538 aaKnown RBP20.18■□□□□ 0.82
CCHCR1-201ENST00000376266 MRS2Q9HD23 443 aa20.17■□□□□ 0.82
CCHCR1-201ENST00000376266 TRPM1Q7Z4N2 1603 aa20.17■□□□□ 0.82
CCHCR1-201ENST00000376266 AEBP2Q6ZN18 517 aaPredicted RBP20.16■□□□□ 0.82
CCHCR1-201ENST00000376266 SLC26A8Q96RN1 970 aa20.16■□□□□ 0.82
CCHCR1-201ENST00000376266 ROCK2O75116 1388 aaKnown RBP20.16■□□□□ 0.82
CCHCR1-201ENST00000376266 TMEM132EQ6IEE7 984 aa20.16■□□□□ 0.82
CCHCR1-201ENST00000376266 RALGAPBQ86X10 1494 aa20.15■□□□□ 0.82
CCHCR1-201ENST00000376266 NRXN3Q9Y4C0 1643 aa20.14■□□□□ 0.82
CCHCR1-201ENST00000376266 RTN4Q9NQC3 1192 aaKnown RBP20.14■□□□□ 0.82
CCHCR1-201ENST00000376266 IQGAP1P46940 1657 aa20.14■□□□□ 0.81
CCHCR1-201ENST00000376266 ALKQ9UM73 1620 aa20.14■□□□□ 0.81
CCHCR1-201ENST00000376266 SETBP1Q9Y6X0 1596 aa20.14■□□□□ 0.81
CCHCR1-201ENST00000376266 CCDC136Q96JN2 1154 aa20.13■□□□□ 0.81
CCHCR1-201ENST00000376266 PRKRIP1Q9H875 184 aaPredicted RBP20.13■□□□□ 0.81
CCHCR1-201ENST00000376266 ADAMTS13Q76LX8 1427 aa20.13■□□□□ 0.81
CCHCR1-201ENST00000376266 CARD11Q9BXL7 1154 aa20.13■□□□□ 0.81
CCHCR1-201ENST00000376266 POLR1AO95602 1720 aaPredicted RBP20.12■□□□□ 0.81
CCHCR1-201ENST00000376266 NPHP4O75161 1426 aaPredicted RBP20.12■□□□□ 0.81
CCHCR1-201ENST00000376266 EIF4G2P78344 907 aaKnown RBP eCLIP20.11■□□□□ 0.81
CCHCR1-201ENST00000376266 KIAA1210Q9ULL0 1709 aa20.1■□□□□ 0.81
CCHCR1-201ENST00000376266 MED14O60244 1454 aa20.1■□□□□ 0.81
CCHCR1-201ENST00000376266 METP08581 1390 aa20.1■□□□□ 0.81
CCHCR1-201ENST00000376266 GPRASP1Q5JY77 1395 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 151.7 ms