RNA–Protein interactions for RNA: ENST00000376233.7

ZNF549-202, Transcript of zinc finger protein 549, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF549, Length 4,053 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549-202ENST00000376233 CABP2Q9NPB3 220 aa13.63□□□□□ -0.23
ZNF549-202ENST00000376233 SPRYD3Q8NCJ5 442 aa13.63□□□□□ -0.23
ZNF549-202ENST00000376233 SHANK2Q9UPX8 1470 aa13.63□□□□□ -0.23
ZNF549-202ENST00000376233 PARD3Q8TEW0 1356 aa13.62□□□□□ -0.23
ZNF549-202ENST00000376233 ABCC10Q5T3U5 1492 aa13.62□□□□□ -0.23
ZNF549-202ENST00000376233 MS4A1P11836 297 aa13.62□□□□□ -0.23
ZNF549-202ENST00000376233 MTHFSP49914 203 aa13.62□□□□□ -0.23
ZNF549-202ENST00000376233 SOX12O15370 315 aa13.61□□□□□ -0.23
ZNF549-202ENST00000376233 BACH2Q9BYV9 841 aa13.61□□□□□ -0.23
ZNF549-202ENST00000376233 RAPGEF3O95398 923 aa13.61□□□□□ -0.23
ZNF549-202ENST00000376233 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.61□□□□□ -0.23
ZNF549-202ENST00000376233 MBD5Q9P267 1494 aa13.61□□□□□ -0.23
ZNF549-202ENST00000376233 STAC3Q96MF2 364 aa13.6□□□□□ -0.23
ZNF549-202ENST00000376233 CGNL1Q0VF96 1302 aa13.6□□□□□ -0.23
ZNF549-202ENST00000376233 A2MP01023 1474 aa13.6□□□□□ -0.23
ZNF549-202ENST00000376233 SLKQ9H2G2 1235 aaPredicted RBP13.6□□□□□ -0.23
ZNF549-202ENST00000376233 HSP90AA1P07900 732 aaKnown RBP13.6□□□□□ -0.23
ZNF549-202ENST00000376233 BECN1Q14457 450 aa13.6□□□□□ -0.23
ZNF549-202ENST00000376233 FAM161AQ3B820 660 aa13.6□□□□□ -0.23
ZNF549-202ENST00000376233 GGNBP2Q9H3C7 697 aa13.6□□□□□ -0.23
ZNF549-202ENST00000376233 ARHGEF12Q9NZN5 1544 aa13.59□□□□□ -0.23
ZNF549-202ENST00000376233 TCP11L2Q8N4U5 519 aa13.59□□□□□ -0.23
ZNF549-202ENST00000376233 SMC4Q9NTJ3 1288 aa13.59□□□□□ -0.23
ZNF549-202ENST00000376233 VGFO15240 615 aaPredicted RBP13.59□□□□□ -0.23
ZNF549-202ENST00000376233 AMER1Q5JTC6 1135 aaPredicted RBP13.59□□□□□ -0.23
ZNF549-202ENST00000376233 ITPRIPQ8IWB1 547 aa13.59□□□□□ -0.23
ZNF549-202ENST00000376233 PLEKHG5O94827 1062 aa13.58□□□□□ -0.24
ZNF549-202ENST00000376233 OSCARQ8IYS5 282 aa13.58□□□□□ -0.24
ZNF549-202ENST00000376233 EVC2Q86UK5 1308 aa13.58□□□□□ -0.24
ZNF549-202ENST00000376233 LRPPRCP42704 1394 aaKnown RBP13.58□□□□□ -0.24
ZNF549-202ENST00000376233 MYH16Q9H6N6 1097 aa13.58□□□□□ -0.24
ZNF549-202ENST00000376233 PLCH2O75038 1416 aa13.58□□□□□ -0.24
ZNF549-202ENST00000376233 DUSP27Q5VZP5 1158 aa13.58□□□□□ -0.24
ZNF549-202ENST00000376233 CYB5RLQ6IPT4 315 aa13.57□□□□□ -0.24
ZNF549-202ENST00000376233 SLFN5Q08AF3 891 aa13.57□□□□□ -0.24
ZNF549-202ENST00000376233 HDGFL2Q7Z4V5 671 aaPredicted RBP13.57□□□□□ -0.24
ZNF549-202ENST00000376233 ADGBQ8N7X0 1667 aa13.57□□□□□ -0.24
ZNF549-202ENST00000376233 RUNDC1Q96C34 613 aa13.56□□□□□ -0.24
ZNF549-202ENST00000376233 ABCA8O94911 1581 aa13.56□□□□□ -0.24
ZNF549-202ENST00000376233 BCORL1Q5H9F3 1711 aa13.56□□□□□ -0.24
ZNF549-202ENST00000376233 KDM5CP41229 1560 aa13.56□□□□□ -0.24
ZNF549-202ENST00000376233 NUTM2FA1L443 756 aa13.55□□□□□ -0.24
ZNF549-202ENST00000376233 ELL2O00472 640 aaPredicted RBP13.55□□□□□ -0.24
ZNF549-202ENST00000376233 TERF2IPQ9NYB0 399 aa13.55□□□□□ -0.24
ZNF549-202ENST00000376233 RNF123Q5XPI4 1314 aa13.54□□□□□ -0.24
ZNF549-202ENST00000376233 RWDD1Q9H446 243 aaPredicted RBP13.54□□□□□ -0.24
ZNF549-202ENST00000376233 ADGRL1O94910 1474 aa13.53□□□□□ -0.24
ZNF549-202ENST00000376233 DUOX2Q9NRD8 1548 aa13.53□□□□□ -0.24
ZNF549-202ENST00000376233 PLEKHH1Q9ULM0 1364 aa13.53□□□□□ -0.24
ZNF549-202ENST00000376233 SCAF11Q99590 1463 aaKnown RBP13.53□□□□□ -0.24
ZNF549-202ENST00000376233 FANCAO15360 1455 aa13.53□□□□□ -0.24
ZNF549-202ENST00000376233 COL17A1Q9UMD9 1497 aaPredicted RBP13.52□□□□□ -0.25
ZNF549-202ENST00000376233 PMFBP1Q8TBY8 1022 aa13.52□□□□□ -0.25
ZNF549-202ENST00000376233 TSR2Q969E8 191 aaKnown RBP13.52□□□□□ -0.25
ZNF549-202ENST00000376233 WWC1Q8IX03 1113 aa13.52□□□□□ -0.25
ZNF549-202ENST00000376233 SAMD9LQ8IVG5 1584 aa13.52□□□□□ -0.25
ZNF549-202ENST00000376233 NSD3Q9BZ95 1437 aa13.51□□□□□ -0.25
ZNF549-202ENST00000376233 SPINK5Q9NQ38 1064 aaPredicted RBP13.51□□□□□ -0.25
ZNF549-202ENST00000376233 MFAP1P55081 439 aaKnown RBP13.5□□□□□ -0.25
ZNF549-202ENST00000376233 CARD14Q9BXL6 1004 aa13.5□□□□□ -0.25
ZNF549-202ENST00000376233 PLA2R1Q13018 1463 aa13.5□□□□□ -0.25
ZNF549-202ENST00000376233 CDC42BPAQ5VT25 1732 aa13.5□□□□□ -0.25
ZNF549-202ENST00000376233 NOS1P29475 1434 aa13.49□□□□□ -0.25
ZNF549-202ENST00000376233 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.49□□□□□ -0.25
ZNF549-202ENST00000376233 RIPK4P57078 832 aa13.49□□□□□ -0.25
ZNF549-202ENST00000376233 ZKSCAN2Q63HK3 967 aa13.49□□□□□ -0.25
ZNF549-202ENST00000376233 C14orf37Q86TY3 774 aa13.49□□□□□ -0.25
ZNF549-202ENST00000376233 PRAM1Q96QH2 718 aa13.49□□□□□ -0.25
ZNF549-202ENST00000376233 GPRASP1Q5JY77 1395 aa13.48□□□□□ -0.25
ZNF549-202ENST00000376233 EIF5BO60841 1220 aaKnown RBP13.48□□□□□ -0.25
ZNF549-202ENST00000376233 HMOX1P09601 288 aa13.48□□□□□ -0.25
ZNF549-202ENST00000376233 ABCC2Q92887 1545 aa13.47□□□□□ -0.25
ZNF549-202ENST00000376233 ZBTB7CA1YPR0 619 aa13.47□□□□□ -0.25
ZNF549-202ENST00000376233 APBB1O00213 710 aa13.47□□□□□ -0.25
ZNF549-202ENST00000376233 PNNQ9H307 717 aaKnown RBP13.47□□□□□ -0.25
ZNF549-202ENST00000376233 DZIP1LQ8IYY4 767 aaKnown RBP13.46□□□□□ -0.25
ZNF549-202ENST00000376233 DMRT2Q9Y5R5 561 aa13.46□□□□□ -0.25
ZNF549-202ENST00000376233 TTC37Q6PGP7 1564 aa13.46□□□□□ -0.25
ZNF549-202ENST00000376233 DIAPH1O60610 1272 aaKnown RBP13.46□□□□□ -0.25
ZNF549-202ENST00000376233 EXOSC9Q06265 439 aaKnown RBP13.46□□□□□ -0.25
ZNF549-202ENST00000376233 ARHGEF5Q12774 1597 aa13.46□□□□□ -0.25
ZNF549-202ENST00000376233 NGEFQ8N5V2 710 aa13.46□□□□□ -0.26
ZNF549-202ENST00000376233 IPO8O15397 1037 aaKnown RBP13.45□□□□□ -0.26
ZNF549-202ENST00000376233 NFKBIBQ15653 356 aa13.45□□□□□ -0.26
ZNF549-202ENST00000376233 ERCC6L2Q5T890 1561 aa13.45□□□□□ -0.26
ZNF549-202ENST00000376233 PDE3AQ14432 1141 aa13.44□□□□□ -0.26
ZNF549-202ENST00000376233 IDI1Q13907 227 aa13.44□□□□□ -0.26
ZNF549-202ENST00000376233 FAM69CQ0P6D2 419 aa13.44□□□□□ -0.26
ZNF549-202ENST00000376233 IGHDP01880 384 aa13.43□□□□□ -0.26
ZNF549-202ENST00000376233 GZF1Q9H116 711 aaPredicted RBP13.43□□□□□ -0.26
ZNF549-202ENST00000376233 CABP1Q9NZU7 370 aa13.43□□□□□ -0.26
ZNF549-202ENST00000376233 CD109Q6YHK3 1445 aa13.43□□□□□ -0.26
ZNF549-202ENST00000376233 MAGI2Q86UL8 1455 aa13.43□□□□□ -0.26
ZNF549-202ENST00000376233 USP35Q9P2H5 1018 aa13.43□□□□□ -0.26
ZNF549-202ENST00000376233 PDZRN3Q9UPQ7 1066 aa13.43□□□□□ -0.26
ZNF549-202ENST00000376233 ASXL1Q8IXJ9 1541 aa13.42□□□□□ -0.26
ZNF549-202ENST00000376233 TNNQ9UQP3 1299 aa13.42□□□□□ -0.26
ZNF549-202ENST00000376233 KDM5DQ9BY66 1539 aa13.42□□□□□ -0.26
ZNF549-202ENST00000376233 NKTRP30414 1462 aaKnown RBP13.42□□□□□ -0.26
ZNF549-202ENST00000376233 FBLN1P23142 703 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms