RNA–Protein interactions for RNA: ENST00000374043.6

PACSIN1-202, Transcript of protein kinase C and casein kinase substrate in neurons 1, humanhuman

TSL 1 (best) BASIC

Gene PACSIN1, Length 4,229 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN1-202ENST00000374043 SMC4Q9NTJ3 1288 aa15.19■□□□□ 0.02
PACSIN1-202ENST00000374043 TERF2IPQ9NYB0 399 aa15.19■□□□□ 0.02
PACSIN1-202ENST00000374043 MSH5O43196 834 aa15.19■□□□□ 0.02
PACSIN1-202ENST00000374043 FBXO31Q5XUX0 539 aaPredicted RBP15.19■□□□□ 0.02
PACSIN1-202ENST00000374043 ITPRIPQ8IWB1 547 aa15.19■□□□□ 0.02
PACSIN1-202ENST00000374043 SMG6Q86US8 1419 aaKnown RBP15.18■□□□□ 0.02
PACSIN1-202ENST00000374043 HSP90AA1P07900 732 aaKnown RBP15.18■□□□□ 0.02
PACSIN1-202ENST00000374043 PRAM1Q96QH2 718 aa15.18■□□□□ 0.02
PACSIN1-202ENST00000374043 IPO9Q96P70 1041 aaKnown RBP15.18■□□□□ 0.02
PACSIN1-202ENST00000374043 FAM135AQ9P2D6 1515 aa15.18■□□□□ 0.02
PACSIN1-202ENST00000374043 APBB1O00213 710 aa15.18■□□□□ 0.02
PACSIN1-202ENST00000374043 TCP11L2Q8N4U5 519 aa15.18■□□□□ 0.02
PACSIN1-202ENST00000374043 ADGRL1O94910 1474 aa15.17■□□□□ 0.02
PACSIN1-202ENST00000374043 PAK3O75914 559 aaPredicted RBP15.17■□□□□ 0.02
PACSIN1-202ENST00000374043 HMOX1P09601 288 aa15.16■□□□□ 0.02
PACSIN1-202ENST00000374043 PLCH2O75038 1416 aa15.16■□□□□ 0.02
PACSIN1-202ENST00000374043 FANCAO15360 1455 aa15.16■□□□□ 0.02
PACSIN1-202ENST00000374043 PRAG1Q86YV5 1406 aa15.16■□□□□ 0.02
PACSIN1-202ENST00000374043 E9PSI1 815 aa15.15■□□□□ 0.02
PACSIN1-202ENST00000374043 FBLN1P23142 703 aa15.14■□□□□ 0.01
PACSIN1-202ENST00000374043 IDI1Q13907 227 aa15.14■□□□□ 0.01
PACSIN1-202ENST00000374043 PER1O15534 1290 aaPredicted RBP15.14■□□□□ 0.01
PACSIN1-202ENST00000374043 DEKP35659 375 aaKnown RBP15.14■□□□□ 0.01
PACSIN1-202ENST00000374043 CD109Q6YHK3 1445 aa15.14■□□□□ 0.01
PACSIN1-202ENST00000374043 RALGAPBQ86X10 1494 aa15.13■□□□□ 0.01
PACSIN1-202ENST00000374043 SPATA31E1Q6ZUB1 1445 aa15.13■□□□□ 0.01
PACSIN1-202ENST00000374043 TSR2Q969E8 191 aaKnown RBP15.13■□□□□ 0.01
PACSIN1-202ENST00000374043 DDRGK1Q96HY6 314 aa15.13■□□□□ 0.01
PACSIN1-202ENST00000374043 MYH16Q9H6N6 1097 aa15.13■□□□□ 0.01
PACSIN1-202ENST00000374043 ITSN2Q9NZM3 1697 aa15.12■□□□□ 0.01
PACSIN1-202ENST00000374043 RTN4Q9NQC3 1192 aaKnown RBP15.12■□□□□ 0.01
PACSIN1-202ENST00000374043 FANCIQ9NVI1 1328 aa15.12■□□□□ 0.01
PACSIN1-202ENST00000374043 LRRIQ1Q96JM4 1722 aa15.12■□□□□ 0.01
PACSIN1-202ENST00000374043 SLKQ9H2G2 1235 aaPredicted RBP15.12■□□□□ 0.01
PACSIN1-202ENST00000374043 CABP1Q9NZU7 370 aa15.11■□□□□ 0.01
PACSIN1-202ENST00000374043 WAPLQ7Z5K2 1190 aa15.11■□□□□ 0.01
PACSIN1-202ENST00000374043 TXNDC2Q86VQ3 553 aa15.11■□□□□ 0.01
PACSIN1-202ENST00000374043 LTV1Q96GA3 475 aaPredicted RBP15.11■□□□□ 0.01
PACSIN1-202ENST00000374043 MBD5Q9P267 1494 aa15.1■□□□□ 0.01
PACSIN1-202ENST00000374043 ABCC10Q5T3U5 1492 aa15.1■□□□□ 0.01
PACSIN1-202ENST00000374043 RIPK4P57078 832 aa15.1■□□□□ 0.01
PACSIN1-202ENST00000374043 RUNDC1Q96C34 613 aa15.1■□□□□ 0.01
PACSIN1-202ENST00000374043 AMER1Q5JTC6 1135 aaPredicted RBP15.09■□□□□ 0.01
PACSIN1-202ENST00000374043 STAC3Q96MF2 364 aa15.09■□□□□ 0.01
PACSIN1-202ENST00000374043 NOS1P29475 1434 aa15.09■□□□□ 0.01
PACSIN1-202ENST00000374043 ADGRL2O95490 1459 aa15.09■□□□□ 0.01
PACSIN1-202ENST00000374043 ERCC6L2Q5T890 1561 aa15.08■□□□□ 0.01
PACSIN1-202ENST00000374043 ASXL2Q76L83 1435 aa15.08■□□□□ 0.01
PACSIN1-202ENST00000374043 A2MP01023 1474 aa15.08■□□□□ 0
PACSIN1-202ENST00000374043 GCC2Q8IWJ2 1684 aa15.08■□□□□ 0
PACSIN1-202ENST00000374043 CENPQQ7L2Z9 268 aaPredicted RBP15.07■□□□□ 0
PACSIN1-202ENST00000374043 NSD3Q9BZ95 1437 aa15.07■□□□□ 0
PACSIN1-202ENST00000374043 DIAPH1O60610 1272 aaKnown RBP15.07■□□□□ 0
PACSIN1-202ENST00000374043 CARD14Q9BXL6 1004 aa15.06■□□□□ 0
PACSIN1-202ENST00000374043 NUTM2GQ5VZR2 741 aa15.06■□□□□ 0
PACSIN1-202ENST00000374043 CDK19Q9BWU1 502 aa15.06■□□□□ 0
PACSIN1-202ENST00000374043 NGDNQ8NEJ9 315 aaKnown RBP15.05■□□□□ -0
PACSIN1-202ENST00000374043 HDGFP51858 240 aaKnown RBP15.05■□□□□ -0
PACSIN1-202ENST00000374043 MFAP1P55081 439 aaKnown RBP15.04■□□□□ -0
PACSIN1-202ENST00000374043 WWC1Q8IX03 1113 aa15.04■□□□□ -0
PACSIN1-202ENST00000374043 SLFN5Q08AF3 891 aa15.03■□□□□ -0
PACSIN1-202ENST00000374043 BECN1Q14457 450 aa15.03■□□□□ -0
PACSIN1-202ENST00000374043 DUSP27Q5VZP5 1158 aa15.03■□□□□ -0
PACSIN1-202ENST00000374043 RWDD1Q9H446 243 aaPredicted RBP15.03■□□□□ -0
PACSIN1-202ENST00000374043 EXOSC9Q06265 439 aaKnown RBP15.03■□□□□ -0
PACSIN1-202ENST00000374043 SLC26A8Q96RN1 970 aa15.03■□□□□ -0
PACSIN1-202ENST00000374043 SPINK5Q9NQ38 1064 aaPredicted RBP15.03■□□□□ -0
PACSIN1-202ENST00000374043 THUMPD2Q9BTF0 503 aaKnown RBP15.03■□□□□ -0
PACSIN1-202ENST00000374043 SHANK2Q9UPX8 1470 aa15.03■□□□□ -0
PACSIN1-202ENST00000374043 KDM5BQ9UGL1 1544 aa15.03■□□□□ -0
PACSIN1-202ENST00000374043 ABCA8O94911 1581 aa15.03■□□□□ -0
PACSIN1-202ENST00000374043 PARD3Q8TEW0 1356 aa15.02■□□□□ -0
PACSIN1-202ENST00000374043 PNNQ9H307 717 aaKnown RBP15.02■□□□□ -0
PACSIN1-202ENST00000374043 ABCC2Q92887 1545 aa15.02□□□□□ -0.01
PACSIN1-202ENST00000374043 COG3Q96JB2 828 aa15.02□□□□□ -0.01
PACSIN1-202ENST00000374043 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.01□□□□□ -0.01
PACSIN1-202ENST00000374043 ZKSCAN2Q63HK3 967 aa15.01□□□□□ -0.01
PACSIN1-202ENST00000374043 SCAF11Q99590 1463 aaKnown RBP15.01□□□□□ -0.01
PACSIN1-202ENST00000374043 DUOX2Q9NRD8 1548 aa15.01□□□□□ -0.01
PACSIN1-202ENST00000374043 PRKAR2BP31323 418 aa15.01□□□□□ -0.01
PACSIN1-202ENST00000374043 FAM161AQ3B820 660 aa15.01□□□□□ -0.01
PACSIN1-202ENST00000374043 RRS1Q15050 365 aaKnown RBP15□□□□□ -0.01
PACSIN1-202ENST00000374043 SLC4A10Q6U841 1118 aa15□□□□□ -0.01
PACSIN1-202ENST00000374043 PMFBP1Q8TBY8 1022 aa15□□□□□ -0.01
PACSIN1-202ENST00000374043 NECTIN2Q92692 538 aa15□□□□□ -0.01
PACSIN1-202ENST00000374043 TPRNQ4KMQ1 711 aa15□□□□□ -0.01
PACSIN1-202ENST00000374043 UHRF1BP1Q6BDS2 1440 aa15□□□□□ -0.01
PACSIN1-202ENST00000374043 IPO8O15397 1037 aaKnown RBP14.99□□□□□ -0.01
PACSIN1-202ENST00000374043 C14orf93Q9H972 538 aaKnown RBP14.99□□□□□ -0.01
PACSIN1-202ENST00000374043 SLC52A1Q9NWF4 448 aa14.99□□□□□ -0.01
PACSIN1-202ENST00000374043 WDR7Q9Y4E6 1490 aa14.99□□□□□ -0.01
PACSIN1-202ENST00000374043 DMRT2Q9Y5R5 561 aa14.99□□□□□ -0.01
PACSIN1-202ENST00000374043 CFAP65Q6ZU64 1925 aaKnown RBP14.99□□□□□ -0.01
PACSIN1-202ENST00000374043 CEBPAP49715 358 aaPredicted RBP14.98□□□□□ -0.01
PACSIN1-202ENST00000374043 DZIP1LQ8IYY4 767 aaKnown RBP14.98□□□□□ -0.01
PACSIN1-202ENST00000374043 PLEKHH1Q9ULM0 1364 aa14.98□□□□□ -0.01
PACSIN1-202ENST00000374043 SAMD9LQ8IVG5 1584 aa14.98□□□□□ -0.01
PACSIN1-202ENST00000374043 MS4A1P11836 297 aa14.98□□□□□ -0.01
PACSIN1-202ENST00000374043 RTF1Q92541 710 aaKnown RBP14.98□□□□□ -0.01
PACSIN1-202ENST00000374043 ARHGEF12Q9NZN5 1544 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms