RNA–Protein interactions for RNA: ENST00000371037.8

SGIP1-203, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SGIP1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-203ENST00000371037 HSCBQ8IWL3 235 aa6.95□□□□□ -1.3
SGIP1-203ENST00000371037 UBAP1LF5GYI3 381 aa6.95□□□□□ -1.3
SGIP1-203ENST00000371037 H3BQV1 296 aa6.95□□□□□ -1.3
SGIP1-203ENST00000371037 IFFO2Q5TF58 517 aa6.95□□□□□ -1.3
SGIP1-203ENST00000371037 MS4A1P11836 297 aa6.94□□□□□ -1.3
SGIP1-203ENST00000371037 BBXQ8WY36 941 aaPredicted RBP6.94□□□□□ -1.3
SGIP1-203ENST00000371037 TRAK1Q9UPV9 953 aa6.94□□□□□ -1.3
SGIP1-203ENST00000371037 HTATSF1O43719 755 aaKnown RBP6.94□□□□□ -1.3
SGIP1-203ENST00000371037 RRP12Q5JTH9 1297 aaKnown RBP6.94□□□□□ -1.3
SGIP1-203ENST00000371037 ELL2O00472 640 aaPredicted RBP6.94□□□□□ -1.3
SGIP1-203ENST00000371037 NAP1L1P55209 391 aaKnown RBP6.94□□□□□ -1.3
SGIP1-203ENST00000371037 TRIM29Q14134 588 aa6.94□□□□□ -1.3
SGIP1-203ENST00000371037 RSF1Q96T23 1441 aaPredicted RBP6.94□□□□□ -1.3
SGIP1-203ENST00000371037 UQCRHLA0A096LP55 91 aa6.94□□□□□ -1.3
SGIP1-203ENST00000371037 EPS15P42566 896 aa6.94□□□□□ -1.3
SGIP1-203ENST00000371037 XPCQ01831 940 aaPredicted RBP6.94□□□□□ -1.3
SGIP1-203ENST00000371037 RILPL2Q969X0 211 aa6.94□□□□□ -1.3
SGIP1-203ENST00000371037 NEUROD6Q96NK8 337 aa6.94□□□□□ -1.3
SGIP1-203ENST00000371037 COG3Q96JB2 828 aa6.94□□□□□ -1.3
SGIP1-203ENST00000371037 C9orf78Q9NZ63 289 aaPredicted RBP6.94□□□□□ -1.3
SGIP1-203ENST00000371037 CLIP1P30622 1438 aa6.93□□□□□ -1.3
SGIP1-203ENST00000371037 MINK1Q8N4C8 1332 aaPredicted RBP6.93□□□□□ -1.3
SGIP1-203ENST00000371037 TSR1Q2NL82 804 aaKnown RBP6.93□□□□□ -1.3
SGIP1-203ENST00000371037 CCDC47Q96A33 483 aaKnown RBP6.93□□□□□ -1.3
SGIP1-203ENST00000371037 BCL2L13Q9BXK5 485 aa6.93□□□□□ -1.3
SGIP1-203ENST00000371037 ZNF622Q969S3 477 aaKnown RBP eCLIP6.93□□□□□ -1.3
SGIP1-203ENST00000371037 TERF2IPQ9NYB0 399 aa6.93□□□□□ -1.3
SGIP1-203ENST00000371037 CALD1Q05682 793 aaKnown RBP6.92□□□□□ -1.3
SGIP1-203ENST00000371037 WASHC4Q2M389 1173 aa6.92□□□□□ -1.3
SGIP1-203ENST00000371037 TMOD2Q9NZR1 351 aa6.92□□□□□ -1.3
SGIP1-203ENST00000371037 RRP7AQ9Y3A4 280 aaKnown RBP6.92□□□□□ -1.3
SGIP1-203ENST00000371037 ZCCHC6Q5VYS8 1495 aaKnown RBP6.92□□□□□ -1.3
SGIP1-203ENST00000371037 FAM184AQ8NB25 1140 aa6.92□□□□□ -1.3
SGIP1-203ENST00000371037 RIC3Q7Z5B4 369 aa6.92□□□□□ -1.3
SGIP1-203ENST00000371037 CCAR2Q8N163 923 aaKnown RBP6.92□□□□□ -1.3
SGIP1-203ENST00000371037 SMC4Q9NTJ3 1288 aa6.92□□□□□ -1.3
SGIP1-203ENST00000371037 EFCAB2Q5VUJ9 269 aa6.91□□□□□ -1.3
SGIP1-203ENST00000371037 NAP1L5Q96NT1 182 aaPredicted RBP6.91□□□□□ -1.3
SGIP1-203ENST00000371037 KRT18P05783 430 aaKnown RBP6.91□□□□□ -1.3
SGIP1-203ENST00000371037 POLD1P28340 1107 aa6.91□□□□□ -1.3
SGIP1-203ENST00000371037 SPINK5Q9NQ38 1064 aaPredicted RBP6.91□□□□□ -1.3
SGIP1-203ENST00000371037 LIG1P18858 919 aa6.91□□□□□ -1.3
SGIP1-203ENST00000371037 CCDC146Q8IYE0 955 aa6.91□□□□□ -1.3
SGIP1-203ENST00000371037 GOLGA6L1Q8N7Z2 621 aa6.91□□□□□ -1.3
SGIP1-203ENST00000371037 GPR162Q16538 588 aa6.91□□□□□ -1.3
SGIP1-203ENST00000371037 FOXD4L6Q3SYB3 417 aaPredicted RBP6.91□□□□□ -1.3
SGIP1-203ENST00000371037 FOXD4L3Q6VB84 417 aaPredicted RBP6.91□□□□□ -1.3
SGIP1-203ENST00000371037 HOMER1Q86YM7 354 aa6.91□□□□□ -1.3
SGIP1-203ENST00000371037 ZHX3Q9H4I2 956 aa6.9□□□□□ -1.3
SGIP1-203ENST00000371037 HDAC5Q9UQL6 1122 aa6.9□□□□□ -1.3
SGIP1-203ENST00000371037 SKIDA1Q1XH10 827 aa6.9□□□□□ -1.3
SGIP1-203ENST00000371037 HSP90AB4PQ58FF6 505 aa6.9□□□□□ -1.31
SGIP1-203ENST00000371037 CHMP4AQ9BY43 222 aa6.9□□□□□ -1.31
SGIP1-203ENST00000371037 PDCL3Q9H2J4 239 aa6.9□□□□□ -1.31
SGIP1-203ENST00000371037 IPO8O15397 1037 aaKnown RBP6.89□□□□□ -1.31
SGIP1-203ENST00000371037 NBPF8Q3BBV2 869 aa6.89□□□□□ -1.31
SGIP1-203ENST00000371037 NBPF14Q5TI25 921 aa6.89□□□□□ -1.31
SGIP1-203ENST00000371037 CSPG5O95196 566 aa6.89□□□□□ -1.31
SGIP1-203ENST00000371037 RBM26Q5T8P6 1007 aaKnown RBP6.89□□□□□ -1.31
SGIP1-203ENST00000371037 CNNM1Q9NRU3 951 aa6.89□□□□□ -1.31
SGIP1-203ENST00000371037 KIF16BQ96L93 1317 aa6.88□□□□□ -1.31
SGIP1-203ENST00000371037 TRDNQ13061 729 aa6.88□□□□□ -1.31
SGIP1-203ENST00000371037 ZPR1O75312 459 aa6.88□□□□□ -1.31
SGIP1-203ENST00000371037 ANKRD62A6NC57 917 aa6.88□□□□□ -1.31
SGIP1-203ENST00000371037 TRMT1LQ7Z2T5 733 aaKnown RBP6.88□□□□□ -1.31
SGIP1-203ENST00000371037 CDK5RAP3Q96JB5 506 aa6.88□□□□□ -1.31
SGIP1-203ENST00000371037 ZNF76P36508 570 aa6.88□□□□□ -1.31
SGIP1-203ENST00000371037 AIDAQ96BJ3 306 aa6.88□□□□□ -1.31
SGIP1-203ENST00000371037 HMMRO75330 724 aa6.87□□□□□ -1.31
SGIP1-203ENST00000371037 STK25O00506 426 aa6.87□□□□□ -1.31
SGIP1-203ENST00000371037 CPLX1O14810 134 aa6.87□□□□□ -1.31
SGIP1-203ENST00000371037 ATXN8OSP0DMR3 200 aa6.87□□□□□ -1.31
SGIP1-203ENST00000371037 C8orf37Q96NL8 207 aa6.87□□□□□ -1.31
SGIP1-203ENST00000371037 MYCP01106 439 aaPredicted RBP6.87□□□□□ -1.31
SGIP1-203ENST00000371037 BIRC2Q13490 618 aa6.87□□□□□ -1.31
SGIP1-203ENST00000371037 DDX58O95786 925 aaKnown RBP6.86□□□□□ -1.31
SGIP1-203ENST00000371037 IFIT2P09913 472 aaKnown RBP6.86□□□□□ -1.31
SGIP1-203ENST00000371037 SYCP1Q15431 976 aa6.86□□□□□ -1.31
SGIP1-203ENST00000371037 PIBF1Q8WXW3 757 aa6.86□□□□□ -1.31
SGIP1-203ENST00000371037 ANO2Q9NQ90 1003 aa6.86□□□□□ -1.31
SGIP1-203ENST00000371037 CABP4P57796 275 aa6.86□□□□□ -1.31
SGIP1-203ENST00000371037 NUTM1Q86Y26 1132 aa6.86□□□□□ -1.31
SGIP1-203ENST00000371037 HOMER2Q9NSB8 354 aa6.86□□□□□ -1.31
SGIP1-203ENST00000371037 USP5P45974 858 aa6.86□□□□□ -1.31
SGIP1-203ENST00000371037 MRPS9P82933 396 aaKnown RBP6.86□□□□□ -1.31
SGIP1-203ENST00000371037 EAPPQ56P03 285 aaPredicted RBP6.86□□□□□ -1.31
SGIP1-203ENST00000371037 CARMIL2Q6F5E8 1435 aa6.86□□□□□ -1.31
SGIP1-203ENST00000371037 CRACR2BQ8N4Y2 399 aaPredicted RBP6.86□□□□□ -1.31
SGIP1-203ENST00000371037 ZNF354CQ86Y25 554 aa6.86□□□□□ -1.31
SGIP1-203ENST00000371037 ABTB2Q8N961 1025 aa6.86□□□□□ -1.31
SGIP1-203ENST00000371037 PMFBP1Q8TBY8 1022 aa6.86□□□□□ -1.31
SGIP1-203ENST00000371037 TRIM21P19474 475 aaKnown RBP6.85□□□□□ -1.31
SGIP1-203ENST00000371037 GPRASP1Q5JY77 1395 aa6.85□□□□□ -1.31
SGIP1-203ENST00000371037 CLUAP1Q96AJ1 413 aa6.85□□□□□ -1.31
SGIP1-203ENST00000371037 COMMD10Q9Y6G5 202 aa6.85□□□□□ -1.31
SGIP1-203ENST00000371037 LRRFIP1Q32MZ4 808 aaKnown RBP6.85□□□□□ -1.31
SGIP1-203ENST00000371037 TNNT3P45378 269 aaPredicted RBP6.85□□□□□ -1.31
SGIP1-203ENST00000371037 LMOD1P29536 600 aaPredicted RBP6.85□□□□□ -1.31
SGIP1-203ENST00000371037 MFAP1P55081 439 aaKnown RBP6.85□□□□□ -1.31
SGIP1-203ENST00000371037 IPO9Q96P70 1041 aaKnown RBP6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms