RNA–Protein interactions for RNA: ENST00000359060.5

SSU72-202, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2 BASIC

Gene SSU72, Length 4,176 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-202ENST00000359060 FTSJ3Q8IY81 847 aaKnown RBP14.48□□□□□ -0.09
SSU72-202ENST00000359060 BCL2L13Q9BXK5 485 aa14.48□□□□□ -0.09
SSU72-202ENST00000359060 ERCC6L2Q5T890 1561 aa14.47□□□□□ -0.09
SSU72-202ENST00000359060 PDE4AP27815 886 aa14.47□□□□□ -0.09
SSU72-202ENST00000359060 CLUAP1Q96AJ1 413 aa14.47□□□□□ -0.09
SSU72-202ENST00000359060 ARHGEF5Q12774 1597 aa14.47□□□□□ -0.09
SSU72-202ENST00000359060 IPO9Q96P70 1041 aaKnown RBP14.47□□□□□ -0.09
SSU72-202ENST00000359060 CABP2Q9NPB3 220 aa14.47□□□□□ -0.09
SSU72-202ENST00000359060 EVC2Q86UK5 1308 aa14.46□□□□□ -0.09
SSU72-202ENST00000359060 MSH5O43196 834 aa14.46□□□□□ -0.09
SSU72-202ENST00000359060 TTC37Q6PGP7 1564 aa14.46□□□□□ -0.09
SSU72-202ENST00000359060 CGNL1Q0VF96 1302 aa14.46□□□□□ -0.09
SSU72-202ENST00000359060 PARD3Q8TEW0 1356 aa14.46□□□□□ -0.1
SSU72-202ENST00000359060 ADCY10Q96PN6 1610 aa14.45□□□□□ -0.1
SSU72-202ENST00000359060 CHD1O14646 1710 aa14.44□□□□□ -0.1
SSU72-202ENST00000359060 CD109Q6YHK3 1445 aa14.44□□□□□ -0.1
SSU72-202ENST00000359060 E9PSI1 815 aa14.44□□□□□ -0.1
SSU72-202ENST00000359060 UPF2Q9HAU5 1272 aaKnown RBP14.44□□□□□ -0.1
SSU72-202ENST00000359060 HDGFL2Q7Z4V5 671 aaPredicted RBP14.44□□□□□ -0.1
SSU72-202ENST00000359060 KDM5CP41229 1560 aa14.44□□□□□ -0.1
SSU72-202ENST00000359060 MTHFSP49914 203 aa14.44□□□□□ -0.1
SSU72-202ENST00000359060 FAM69CQ0P6D2 419 aa14.44□□□□□ -0.1
SSU72-202ENST00000359060 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.43□□□□□ -0.1
SSU72-202ENST00000359060 ASXL2Q76L83 1435 aa14.43□□□□□ -0.1
SSU72-202ENST00000359060 DDRGK1Q96HY6 314 aa14.43□□□□□ -0.1
SSU72-202ENST00000359060 SCAF11Q99590 1463 aaKnown RBP14.42□□□□□ -0.1
SSU72-202ENST00000359060 SKAP1Q86WV1 359 aa14.42□□□□□ -0.1
SSU72-202ENST00000359060 TERF2IPQ9NYB0 399 aa14.42□□□□□ -0.1
SSU72-202ENST00000359060 WDR7Q9Y4E6 1490 aa14.42□□□□□ -0.1
SSU72-202ENST00000359060 AMER1Q5JTC6 1135 aaPredicted RBP14.42□□□□□ -0.1
SSU72-202ENST00000359060 GGNBP2Q9H3C7 697 aa14.42□□□□□ -0.1
SSU72-202ENST00000359060 COG6Q9Y2V7 657 aa14.42□□□□□ -0.1
SSU72-202ENST00000359060 BCORL1Q5H9F3 1711 aa14.41□□□□□ -0.1
SSU72-202ENST00000359060 C20orf194Q5TEA3 1177 aa14.41□□□□□ -0.1
SSU72-202ENST00000359060 PLA2R1Q13018 1463 aa14.41□□□□□ -0.1
SSU72-202ENST00000359060 PREX2Q70Z35 1606 aa14.41□□□□□ -0.1
SSU72-202ENST00000359060 SOX12O15370 315 aa14.41□□□□□ -0.1
SSU72-202ENST00000359060 BCAR3O75815 825 aa14.4□□□□□ -0.1
SSU72-202ENST00000359060 COL17A1Q9UMD9 1497 aaPredicted RBP14.39□□□□□ -0.11
SSU72-202ENST00000359060 NOS1P29475 1434 aa14.39□□□□□ -0.11
SSU72-202ENST00000359060 TCP11L2Q8N4U5 519 aa14.39□□□□□ -0.11
SSU72-202ENST00000359060 LRPPRCP42704 1394 aaKnown RBP14.39□□□□□ -0.11
SSU72-202ENST00000359060 CENPQQ7L2Z9 268 aaPredicted RBP14.39□□□□□ -0.11
SSU72-202ENST00000359060 GPRASP1Q5JY77 1395 aa14.39□□□□□ -0.11
SSU72-202ENST00000359060 MYH16Q9H6N6 1097 aa14.38□□□□□ -0.11
SSU72-202ENST00000359060 MYO5CQ9NQX4 1742 aa14.38□□□□□ -0.11
SSU72-202ENST00000359060 CROCC2H7BZ55 1655 aa14.38□□□□□ -0.11
SSU72-202ENST00000359060 PAK3O75914 559 aaPredicted RBP14.38□□□□□ -0.11
SSU72-202ENST00000359060 RUNDC1Q96C34 613 aa14.37□□□□□ -0.11
SSU72-202ENST00000359060 NUTM2FA1L443 756 aa14.37□□□□□ -0.11
SSU72-202ENST00000359060 PANK1Q8TE04 598 aa14.37□□□□□ -0.11
SSU72-202ENST00000359060 PLEKHG5O94827 1062 aa14.36□□□□□ -0.11
SSU72-202ENST00000359060 MAST1Q9Y2H9 1570 aa14.36□□□□□ -0.11
SSU72-202ENST00000359060 SMC4Q9NTJ3 1288 aa14.36□□□□□ -0.11
SSU72-202ENST00000359060 RTEL1-TNFRSF6BF6WH68 1400 aa14.36□□□□□ -0.11
SSU72-202ENST00000359060 NSD3Q9BZ95 1437 aa14.36□□□□□ -0.11
SSU72-202ENST00000359060 CDC42BPBQ9Y5S2 1711 aa14.36□□□□□ -0.11
SSU72-202ENST00000359060 DEKP35659 375 aaKnown RBP14.35□□□□□ -0.11
SSU72-202ENST00000359060 IDI1Q13907 227 aa14.35□□□□□ -0.11
SSU72-202ENST00000359060 PRAM1Q96QH2 718 aa14.35□□□□□ -0.11
SSU72-202ENST00000359060 KDM5DQ9BY66 1539 aa14.35□□□□□ -0.11
SSU72-202ENST00000359060 SLC4A3P48751 1232 aa14.35□□□□□ -0.11
SSU72-202ENST00000359060 SLFN5Q08AF3 891 aa14.35□□□□□ -0.11
SSU72-202ENST00000359060 MS4A1P11836 297 aa14.34□□□□□ -0.11
SSU72-202ENST00000359060 DUSP27Q5VZP5 1158 aa14.34□□□□□ -0.11
SSU72-202ENST00000359060 CFAP65Q6ZU64 1925 aaKnown RBP14.34□□□□□ -0.11
SSU72-202ENST00000359060 EIF2AK4Q9P2K8 1649 aaKnown RBP14.33□□□□□ -0.12
SSU72-202ENST00000359060 ITPRIPQ8IWB1 547 aa14.33□□□□□ -0.12
SSU72-202ENST00000359060 CARD14Q9BXL6 1004 aa14.33□□□□□ -0.12
SSU72-202ENST00000359060 PNNQ9H307 717 aaKnown RBP14.33□□□□□ -0.12
SSU72-202ENST00000359060 C14orf93Q9H972 538 aaKnown RBP14.32□□□□□ -0.12
SSU72-202ENST00000359060 NGEFQ8N5V2 710 aa14.32□□□□□ -0.12
SSU72-202ENST00000359060 SLC52A1Q9NWF4 448 aa14.32□□□□□ -0.12
SSU72-202ENST00000359060 RPGRIP1LQ68CZ1 1315 aa14.31□□□□□ -0.12
SSU72-202ENST00000359060 FBXO31Q5XUX0 539 aaPredicted RBP14.31□□□□□ -0.12
SSU72-202ENST00000359060 C14orf37Q86TY3 774 aa14.31□□□□□ -0.12
SSU72-202ENST00000359060 ATP7AQ04656 1500 aa14.31□□□□□ -0.12
SSU72-202ENST00000359060 WWC1Q8IX03 1113 aa14.3□□□□□ -0.12
SSU72-202ENST00000359060 ZCCHC11Q5TAX3 1644 aaKnown RBP14.3□□□□□ -0.12
SSU72-202ENST00000359060 FAM161AQ3B820 660 aa14.3□□□□□ -0.12
SSU72-202ENST00000359060 PLEKHH1Q9ULM0 1364 aa14.3□□□□□ -0.12
SSU72-202ENST00000359060 ATP10AO60312 1499 aa14.3□□□□□ -0.12
SSU72-202ENST00000359060 RNF123Q5XPI4 1314 aa14.3□□□□□ -0.12
SSU72-202ENST00000359060 ELL2O00472 640 aaPredicted RBP14.3□□□□□ -0.12
SSU72-202ENST00000359060 HDGFP51858 240 aaKnown RBP14.3□□□□□ -0.12
SSU72-202ENST00000359060 BACH2Q9BYV9 841 aa14.3□□□□□ -0.12
SSU72-202ENST00000359060 ABCC1P33527 1531 aa14.29□□□□□ -0.12
SSU72-202ENST00000359060 ZNF518AQ6AHZ1 1483 aa14.29□□□□□ -0.12
SSU72-202ENST00000359060 DIAPH1O60610 1272 aaKnown RBP14.29□□□□□ -0.12
SSU72-202ENST00000359060 RWDD1Q9H446 243 aaPredicted RBP14.29□□□□□ -0.12
SSU72-202ENST00000359060 RIPK4P57078 832 aa14.28□□□□□ -0.12
SSU72-202ENST00000359060 BECN1Q14457 450 aa14.28□□□□□ -0.12
SSU72-202ENST00000359060 ASXL1Q8IXJ9 1541 aa14.28□□□□□ -0.12
SSU72-202ENST00000359060 PMFBP1Q8TBY8 1022 aa14.28□□□□□ -0.12
SSU72-202ENST00000359060 CABP1Q9NZU7 370 aa14.28□□□□□ -0.12
SSU72-202ENST00000359060 ZBTB7CA1YPR0 619 aa14.27□□□□□ -0.12
SSU72-202ENST00000359060 TSR2Q969E8 191 aaKnown RBP14.27□□□□□ -0.12
SSU72-202ENST00000359060 UHRF1BP1LA0JNW5 1464 aa14.27□□□□□ -0.12
SSU72-202ENST00000359060 ARXQ96QS3 562 aa14.26□□□□□ -0.13
SSU72-202ENST00000359060 MAGI2Q86UL8 1455 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms