RNA–Protein interactions for RNA: ENST00000341372.7

TPM3-207, Transcript of tropomyosin 3, humanhuman

TSL 5 BASIC

Gene TPM3, Length 2,007 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-207ENST00000341372 KANK1Q14678 1352 aa15.55■□□□□ 0.08
TPM3-207ENST00000341372 CEP170BQ9Y4F5 1589 aaPredicted RBP15.55■□□□□ 0.08
TPM3-207ENST00000341372 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.55■□□□□ 0.084e-9■■■■■ 28.1
TPM3-207ENST00000341372 ERVK-7P63135 1459 aa15.54■□□□□ 0.08
TPM3-207ENST00000341372 EFCAB6Q5THR3 1501 aa15.53■□□□□ 0.08
TPM3-207ENST00000341372 ITGAEP38570 1179 aa15.53■□□□□ 0.08
TPM3-207ENST00000341372 TNRQ92752 1358 aa15.52■□□□□ 0.08
TPM3-207ENST00000341372 IQGAP3Q86VI3 1631 aa15.52■□□□□ 0.08
TPM3-207ENST00000341372 TET3O43151 1660 aa15.52■□□□□ 0.07
TPM3-207ENST00000341372 NAIPQ13075 1403 aa15.51■□□□□ 0.07
TPM3-207ENST00000341372 A2ML1A8K2U0 1454 aa15.51■□□□□ 0.07
TPM3-207ENST00000341372 HFM1A2PYH4 1435 aa15.51■□□□□ 0.07
TPM3-207ENST00000341372 FBXO31Q5XUX0 539 aaPredicted RBP15.51■□□□□ 0.07
TPM3-207ENST00000341372 NLRP1Q9C000 1473 aa15.51■□□□□ 0.07
TPM3-207ENST00000341372 HSPA2P54652 639 aa15.5■□□□□ 0.07
TPM3-207ENST00000341372 STRCQ7RTU9 1775 aa15.5■□□□□ 0.07
TPM3-207ENST00000341372 RPRD2Q5VT52 1461 aaKnown RBP15.48■□□□□ 0.07
TPM3-207ENST00000341372 PLA2R1Q13018 1463 aa15.48■□□□□ 0.07
TPM3-207ENST00000341372 CFAP65Q6ZU64 1925 aaKnown RBP15.47■□□□□ 0.07
TPM3-207ENST00000341372 NOS1P29475 1434 aa15.46■□□□□ 0.07
TPM3-207ENST00000341372 SYNMO15061 1565 aa15.45■□□□□ 0.06
TPM3-207ENST00000341372 E9PCH4 1651 aa15.44■□□□□ 0.06
TPM3-207ENST00000341372 UGGT1Q9NYU2 1555 aa15.43■□□□□ 0.06
TPM3-207ENST00000341372 KDM5AP29375 1690 aaKnown RBP15.43■□□□□ 0.06
TPM3-207ENST00000341372 UBR1Q8IWV7 1749 aa15.42■□□□□ 0.06
TPM3-207ENST00000341372 NUP155O75694 1391 aa15.42■□□□□ 0.06
TPM3-207ENST00000341372 POLR1AO95602 1720 aaPredicted RBP15.4■□□□□ 0.06
TPM3-207ENST00000341372 PTPRTO14522 1441 aa15.4■□□□□ 0.06
TPM3-207ENST00000341372 PIK3C2BO00750 1634 aa15.4■□□□□ 0.06
TPM3-207ENST00000341372 NEURL4Q96JN8 1562 aa15.38■□□□□ 0.05
TPM3-207ENST00000341372 ARHGAP23Q9P227 1491 aa15.36■□□□□ 0.05
TPM3-207ENST00000341372 ADGRB3O60242 1522 aa15.36■□□□□ 0.05
TPM3-207ENST00000341372 SLIT1O75093 1534 aa15.36■□□□□ 0.05
TPM3-207ENST00000341372 SPHKAPQ2M3C7 1700 aa15.36■□□□□ 0.05
TPM3-207ENST00000341372 THEMISQ8N1K5 641 aaPredicted RBP15.36■□□□□ 0.05
TPM3-207ENST00000341372 TRIM26Q12899 539 aaPredicted RBP15.35■□□□□ 0.05
TPM3-207ENST00000341372 BRPF1P55201 1214 aaPredicted RBP15.34■□□□□ 0.05
TPM3-207ENST00000341372 MED14O60244 1454 aa15.34■□□□□ 0.05
TPM3-207ENST00000341372 SLC52A1Q9NWF4 448 aa15.34■□□□□ 0.05
TPM3-207ENST00000341372 HS6ST3Q8IZP7 471 aa15.33■□□□□ 0.04
TPM3-207ENST00000341372 IDI1Q13907 227 aa15.33■□□□□ 0.04
TPM3-207ENST00000341372 SETD5Q9C0A6 1442 aa15.32■□□□□ 0.04
TPM3-207ENST00000341372 NCKAP5LQ9HCH0 1330 aa15.32■□□□□ 0.04
TPM3-207ENST00000341372 TMEM131LA2VDJ0 1609 aa15.31■□□□□ 0.04
TPM3-207ENST00000341372 TRPM2O94759 1503 aa15.31■□□□□ 0.04
TPM3-207ENST00000341372 ACIN1Q9UKV3 1341 aaKnown RBP15.3■□□□□ 0.04
TPM3-207ENST00000341372 MYO5BQ9ULV0 1848 aa15.3■□□□□ 0.04
TPM3-207ENST00000341372 SCAF11Q99590 1463 aaKnown RBP15.29■□□□□ 0.04
TPM3-207ENST00000341372 IQGAP1P46940 1657 aa15.29■□□□□ 0.04
TPM3-207ENST00000341372 TMEM2Q9UHN6 1383 aa15.29■□□□□ 0.04
TPM3-207ENST00000341372 ANKLE2Q86XL3 938 aa15.29■□□□□ 0.04
TPM3-207ENST00000341372 LTBP4Q8N2S1 1624 aa15.28■□□□□ 0.04
TPM3-207ENST00000341372 NPM2Q86SE8 214 aaKnown RBP15.27■□□□□ 0.04
TPM3-207ENST00000341372 NPHP4O75161 1426 aaPredicted RBP15.27■□□□□ 0.04
TPM3-207ENST00000341372 CLTCL1P53675 1640 aa15.27■□□□□ 0.04
TPM3-207ENST00000341372 DCAF8L1A6NGE4 600 aa15.27■□□□□ 0.03
TPM3-207ENST00000341372 TRIM52Q96A61 297 aa15.27■□□□□ 0.03
TPM3-207ENST00000341372 RAB3GAP2Q9H2M9 1393 aa15.27■□□□□ 0.03
TPM3-207ENST00000341372 NKX1-1Q15270 411 aaPredicted RBP15.26■□□□□ 0.03
TPM3-207ENST00000341372 ZFYVE9O95405 1425 aa15.26■□□□□ 0.03
TPM3-207ENST00000341372 LTKP29376 864 aa15.24■□□□□ 0.03
TPM3-207ENST00000341372 STAG3Q9UJ98 1225 aa15.24■□□□□ 0.03
TPM3-207ENST00000341372 HRCP23327 699 aa15.23■□□□□ 0.03
TPM3-207ENST00000341372 KIF1BO60333 1816 aa15.22■□□□□ 0.03
TPM3-207ENST00000341372 CIZ1Q9ULV3 898 aaPredicted RBP15.21■□□□□ 0.03
TPM3-207ENST00000341372 RIMS2Q9UQ26 1411 aa15.21■□□□□ 0.03
TPM3-207ENST00000341372 TXNDC2Q86VQ3 553 aa15.21■□□□□ 0.02
TPM3-207ENST00000341372 MPHOSPH9Q99550 1183 aa15.21■□□□□ 0.02
TPM3-207ENST00000341372 EID1Q9Y6B2 187 aa15.21■□□□□ 0.02
TPM3-207ENST00000341372 IQSEC2Q5JU85 1478 aa15.2■□□□□ 0.02
TPM3-207ENST00000341372 GTPBP6O43824 516 aaPredicted RBP15.19■□□□□ 0.02
TPM3-207ENST00000341372 ZNF335Q9H4Z2 1342 aaPredicted RBP15.19■□□□□ 0.02
TPM3-207ENST00000341372 PLCD3Q8N3E9 789 aa15.18■□□□□ 0.02
TPM3-207ENST00000341372 CPS1P31327 1500 aa15.18■□□□□ 0.02
TPM3-207ENST00000341372 CERKQ8TCT0 537 aa15.17■□□□□ 0.02
TPM3-207ENST00000341372 PLEKHG1Q9ULL1 1385 aa15.17■□□□□ 0.02
TPM3-207ENST00000341372 NEXMIFQ5QGS0 1516 aa15.17■□□□□ 0.02
TPM3-207ENST00000341372 STRCP1A6NGW2 1772 aa15.17■□□□□ 0.02
TPM3-207ENST00000341372 LMOD2Q6P5Q4 547 aa15.16■□□□□ 0.02
TPM3-207ENST00000341372 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.15■□□□□ 0.02
TPM3-207ENST00000341372 DIP2AQ14689 1571 aa15.15■□□□□ 0.02
TPM3-207ENST00000341372 HDGFP51858 240 aaKnown RBP15.14■□□□□ 0.01
TPM3-207ENST00000341372 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.14■□□□□ 0.01
TPM3-207ENST00000341372 CCDC144AA2RUR9 1427 aa15.14■□□□□ 0.01
TPM3-207ENST00000341372 NWD1Q149M9 1564 aa15.13■□□□□ 0.01
TPM3-207ENST00000341372 NRXN3Q9Y4C0 1643 aa15.13■□□□□ 0.01
TPM3-207ENST00000341372 SETBP1Q9Y6X0 1596 aa15.13■□□□□ 0.01
TPM3-207ENST00000341372 SPATA31E1Q6ZUB1 1445 aa15.12■□□□□ 0.01
TPM3-207ENST00000341372 ADAMTS13Q76LX8 1427 aa15.12■□□□□ 0.01
TPM3-207ENST00000341372 PPLO60437 1756 aa15.12■□□□□ 0.01
TPM3-207ENST00000341372 RNF25Q96BH1 459 aaPredicted RBP15.12■□□□□ 0.01
TPM3-207ENST00000341372 IFT172Q9UG01 1749 aa15.11■□□□□ 0.01
TPM3-207ENST00000341372 PPP1R15AO75807 674 aaPredicted RBP15.1■□□□□ 0.01
TPM3-207ENST00000341372 CHD2O14647 1828 aaKnown RBP15.09■□□□□ 0.01
TPM3-207ENST00000341372 FBXO41Q8TF61 875 aa15.09■□□□□ 0.01
TPM3-207ENST00000341372 ANKRD30BQ9BXX2 1392 aa15.09■□□□□ 0.01
TPM3-207ENST00000341372 RPGRIP1LQ68CZ1 1315 aa15.09■□□□□ 0.01
TPM3-207ENST00000341372 LRRC7Q96NW7 1537 aa15.08■□□□□ 0
TPM3-207ENST00000341372 NKTRP30414 1462 aaKnown RBP15.08■□□□□ 0
TPM3-207ENST00000341372 ZNF326Q5BKZ1 582 aaKnown RBP15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms