RNA–Protein interactions for RNA: ENST00000321949.12

CRTC1-201, Transcript of CREB regulated transcription coactivator 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CRTC1, Length 2,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC1-201ENST00000321949 ZFYVE16Q7Z3T8 1539 aa23.43■■□□□ 1.34
CRTC1-201ENST00000321949 SPAG9O60271 1321 aaKnown RBP23.43■■□□□ 1.34
CRTC1-201ENST00000321949 NPM1P06748 294 aaKnown RBP eCLIP23.43■■□□□ 1.34
CRTC1-201ENST00000321949 DUSP27Q5VZP5 1158 aa23.42■■□□□ 1.34
CRTC1-201ENST00000321949 EIF2AK4Q9P2K8 1649 aaKnown RBP23.42■■□□□ 1.34
CRTC1-201ENST00000321949 AMER1Q5JTC6 1135 aaPredicted RBP23.39■■□□□ 1.34
CRTC1-201ENST00000321949 KDM2BQ8NHM5 1336 aa23.39■■□□□ 1.33
CRTC1-201ENST00000321949 SLC4A3P48751 1232 aa23.38■■□□□ 1.33
CRTC1-201ENST00000321949 AFAP1Q8N556 730 aa23.38■■□□□ 1.33
CRTC1-201ENST00000321949 ADGRL1O94910 1474 aa23.37■■□□□ 1.33
CRTC1-201ENST00000321949 INO80Q9ULG1 1556 aaPredicted RBP23.37■■□□□ 1.33
CRTC1-201ENST00000321949 ATP10AO60312 1499 aa23.37■■□□□ 1.33
CRTC1-201ENST00000321949 CCDC146Q8IYE0 955 aa23.37■■□□□ 1.33
CRTC1-201ENST00000321949 GOLGA2Q08379 1002 aa23.36■■□□□ 1.33
CRTC1-201ENST00000321949 ATP7AQ04656 1500 aa23.35■■□□□ 1.33
CRTC1-201ENST00000321949 ZNF521Q96K83 1311 aa23.34■■□□□ 1.33
CRTC1-201ENST00000321949 SCAPERQ9BY12 1400 aa23.34■■□□□ 1.33
CRTC1-201ENST00000321949 USP35Q9P2H5 1018 aa23.33■■□□□ 1.33
CRTC1-201ENST00000321949 PPM1GO15355 546 aaPredicted RBP23.33■■□□□ 1.33
CRTC1-201ENST00000321949 CENPQQ7L2Z9 268 aaPredicted RBP23.33■■□□□ 1.33
CRTC1-201ENST00000321949 IL27Q8NEV9 243 aa23.32■■□□□ 1.32
CRTC1-201ENST00000321949 RNF17Q9BXT8 1623 aaKnown RBP23.32■■□□□ 1.32
CRTC1-201ENST00000321949 DDRGK1Q96HY6 314 aa23.32■■□□□ 1.32
CRTC1-201ENST00000321949 SPINK5Q9NQ38 1064 aaPredicted RBP23.31■■□□□ 1.32
CRTC1-201ENST00000321949 CFAP74Q9C0B2 1584 aa23.3■■□□□ 1.32
CRTC1-201ENST00000321949 RGS3P49796 1198 aa23.29■■□□□ 1.32
CRTC1-201ENST00000321949 DEPDC5O75140 1603 aa23.29■■□□□ 1.32
CRTC1-201ENST00000321949 SLFN5Q08AF3 891 aa23.29■■□□□ 1.32
CRTC1-201ENST00000321949 APAF1O14727 1248 aa23.28■■□□□ 1.32
CRTC1-201ENST00000321949 MADDQ8WXG6 1647 aa23.27■■□□□ 1.32
CRTC1-201ENST00000321949 C8orf34Q49A92 452 aa23.27■■□□□ 1.32
CRTC1-201ENST00000321949 CDCA8Q53HL2 280 aa23.27■■□□□ 1.32
CRTC1-201ENST00000321949 CD109Q6YHK3 1445 aa23.26■■□□□ 1.31
CRTC1-201ENST00000321949 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.26■■□□□ 1.31
CRTC1-201ENST00000321949 BCAR3O75815 825 aa23.25■■□□□ 1.31
CRTC1-201ENST00000321949 FAM161AQ3B820 660 aa23.25■■□□□ 1.31
CRTC1-201ENST00000321949 RTN4Q9NQC3 1192 aaKnown RBP23.25■■□□□ 1.31
CRTC1-201ENST00000321949 SCAF11Q99590 1463 aaKnown RBP23.25■■□□□ 1.31
CRTC1-201ENST00000321949 ASXL1Q8IXJ9 1541 aa23.24■■□□□ 1.31
CRTC1-201ENST00000321949 ZNF518AQ6AHZ1 1483 aa23.24■■□□□ 1.31
CRTC1-201ENST00000321949 IQGAP1P46940 1657 aa23.23■■□□□ 1.31
CRTC1-201ENST00000321949 DAXXQ9UER7 740 aaPredicted RBP23.23■■□□□ 1.31
CRTC1-201ENST00000321949 NFKBIBQ15653 356 aa23.22■■□□□ 1.31
CRTC1-201ENST00000321949 DMRT2Q9Y5R5 561 aa23.22■■□□□ 1.31
CRTC1-201ENST00000321949 SYNMO15061 1565 aa23.21■■□□□ 1.31
CRTC1-201ENST00000321949 KIDINS220Q9ULH0 1771 aa23.21■■□□□ 1.31
CRTC1-201ENST00000321949 PIK3C2GO75747 1445 aa23.21■■□□□ 1.31
CRTC1-201ENST00000321949 TRMT2AQ8IZ69 625 aaKnown RBP23.2■■□□□ 1.3
CRTC1-201ENST00000321949 VWDEQ8N2E2 1590 aa23.2■■□□□ 1.3
CRTC1-201ENST00000321949 TET3O43151 1660 aa23.19■■□□□ 1.3
CRTC1-201ENST00000321949 KANK1Q14678 1352 aa23.19■■□□□ 1.3
CRTC1-201ENST00000321949 CFAP70Q5T0N1 1121 aa23.18■■□□□ 1.3
CRTC1-201ENST00000321949 POGZQ7Z3K3 1410 aa23.17■■□□□ 1.3
CRTC1-201ENST00000321949 CARD14Q9BXL6 1004 aa23.16■■□□□ 1.3
CRTC1-201ENST00000321949 TRPM2O94759 1503 aa23.16■■□□□ 1.3
CRTC1-201ENST00000321949 NKTRP30414 1462 aaKnown RBP23.16■■□□□ 1.3
CRTC1-201ENST00000321949 CLTCL1P53675 1640 aa23.15■■□□□ 1.3
CRTC1-201ENST00000321949 MYOM1P52179 1685 aa23.15■■□□□ 1.3
CRTC1-201ENST00000321949 MROH1Q8NDA8 1641 aa23.15■■□□□ 1.3
CRTC1-201ENST00000321949 SPHKAPQ2M3C7 1700 aa23.14■■□□□ 1.3
CRTC1-201ENST00000321949 KIF3BO15066 747 aa23.14■■□□□ 1.3
CRTC1-201ENST00000321949 IGHDP01880 384 aa23.14■■□□□ 1.3
CRTC1-201ENST00000321949 PTPRTO14522 1441 aa23.14■■□□□ 1.29
CRTC1-201ENST00000321949 EIF3AQ14152 1382 aaKnown RBP23.14■■□□□ 1.29
CRTC1-201ENST00000321949 NEO1Q92859 1461 aa23.13■■□□□ 1.29
CRTC1-201ENST00000321949 GSE1Q14687 1217 aa23.13■■□□□ 1.29
CRTC1-201ENST00000321949 E9PSI1 815 aa23.13■■□□□ 1.29
CRTC1-201ENST00000321949 NPC1L1Q9UHC9 1359 aa23.13■■□□□ 1.29
CRTC1-201ENST00000321949 MLH3Q9UHC1 1453 aa23.12■■□□□ 1.29
CRTC1-201ENST00000321949 ADGRF5Q8IZF2 1346 aa23.1■■□□□ 1.29
CRTC1-201ENST00000321949 HECW2Q9P2P5 1572 aa23.1■■□□□ 1.29
CRTC1-201ENST00000321949 STAC3Q96MF2 364 aa23.1■■□□□ 1.29
CRTC1-201ENST00000321949 CEP152O94986 1710 aa23.1■■□□□ 1.29
CRTC1-201ENST00000321949 NEUROD2Q15784 382 aa23.09■■□□□ 1.29
CRTC1-201ENST00000321949 PANK1Q8TE04 598 aa23.09■■□□□ 1.29
CRTC1-201ENST00000321949 RIMBP3CA6NJZ7 1639 aa23.08■■□□□ 1.29
CRTC1-201ENST00000321949 RIMBP3BA6NNM3 1639 aa23.08■■□□□ 1.29
CRTC1-201ENST00000321949 RIMBP3Q9UFD9 1639 aa23.08■■□□□ 1.29
CRTC1-201ENST00000321949 TNNT2P45379 298 aaPredicted RBP23.08■■□□□ 1.29
CRTC1-201ENST00000321949 BRPF3Q9ULD4 1205 aa23.08■■□□□ 1.29
CRTC1-201ENST00000321949 FRAT1Q92837 279 aaPredicted RBP23.08■■□□□ 1.28
CRTC1-201ENST00000321949 COG6Q9Y2V7 657 aa23.08■■□□□ 1.28
CRTC1-201ENST00000321949 ERVK-7P63135 1459 aa23.07■■□□□ 1.28
CRTC1-201ENST00000321949 CANXP27824 592 aaKnown RBP23.07■■□□□ 1.28
CRTC1-201ENST00000321949 KDM5AP29375 1690 aaKnown RBP23.07■■□□□ 1.28
CRTC1-201ENST00000321949 UGGT1Q9NYU2 1555 aa23.06■■□□□ 1.28
CRTC1-201ENST00000321949 FRAT2O75474 233 aaPredicted RBP23.06■■□□□ 1.28
CRTC1-201ENST00000321949 ANO8Q9HCE9 1232 aaPredicted RBP23.06■■□□□ 1.28
CRTC1-201ENST00000321949 MAP3K4Q9Y6R4 1608 aa23.06■■□□□ 1.28
CRTC1-201ENST00000321949 CYB5RLQ6IPT4 315 aa23.06■■□□□ 1.28
CRTC1-201ENST00000321949 WWC1Q8IX03 1113 aa23.06■■□□□ 1.28
CRTC1-201ENST00000321949 RRP7AQ9Y3A4 280 aaKnown RBP23.05■■□□□ 1.28
CRTC1-201ENST00000321949 LMTK2Q8IWU2 1503 aa23.05■■□□□ 1.28
CRTC1-201ENST00000321949 CENPJQ9HC77 1338 aaPredicted RBP23.05■■□□□ 1.28
CRTC1-201ENST00000321949 GLI2P10070 1586 aa23.04■■□□□ 1.28
CRTC1-201ENST00000321949 EFCAB6Q5THR3 1501 aa23.04■■□□□ 1.28
CRTC1-201ENST00000321949 FRMPD1Q5SYB0 1578 aa23.03■■□□□ 1.28
CRTC1-201ENST00000321949 SEC24BO95487 1268 aa23.03■■□□□ 1.28
CRTC1-201ENST00000321949 CLUAP1Q96AJ1 413 aa23.02■■□□□ 1.28
CRTC1-201ENST00000321949 ABCA6Q8N139 1617 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms