RNA–Protein interactions for RNA: ENST00000318887.7

C3orf38-201, Transcript of chromosome 3 open reading frame 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C3orf38, Length 2,633 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf38-201ENST00000318887 CDCA7LQ96GN5 454 aa16.57■□□□□ 0.24
C3orf38-201ENST00000318887 PPRC1Q5VV67 1664 aaKnown RBP16.57■□□□□ 0.24
C3orf38-201ENST00000318887 SYCP2Q9BX26 1530 aa16.56■□□□□ 0.24
C3orf38-201ENST00000318887 USP19O94966 1318 aa16.56■□□□□ 0.24
C3orf38-201ENST00000318887 RGS3P49796 1198 aa16.56■□□□□ 0.24
C3orf38-201ENST00000318887 INSRP06213 1382 aa16.56■□□□□ 0.24
C3orf38-201ENST00000318887 SCAPERQ9BY12 1400 aa16.55■□□□□ 0.24
C3orf38-201ENST00000318887 ADGRL1O94910 1474 aa16.55■□□□□ 0.24
C3orf38-201ENST00000318887 VIRMAQ69YN4 1812 aaKnown RBP16.55■□□□□ 0.24
C3orf38-201ENST00000318887 ERBB4Q15303 1308 aa16.54■□□□□ 0.24
C3orf38-201ENST00000318887 MCM4P33991 863 aa16.54■□□□□ 0.24
C3orf38-201ENST00000318887 GRPEL1Q9HAV7 217 aa16.54■□□□□ 0.24
C3orf38-201ENST00000318887 TRAPPC8Q9Y2L5 1435 aa16.54■□□□□ 0.24
C3orf38-201ENST00000318887 PLEKHH2Q8IVE3 1493 aa16.53■□□□□ 0.24
C3orf38-201ENST00000318887 NLRP13Q86W25 1043 aa16.53■□□□□ 0.24
C3orf38-201ENST00000318887 TERF1P54274 439 aa16.53■□□□□ 0.24
C3orf38-201ENST00000318887 ZMYM4Q5VZL5 1548 aa16.53■□□□□ 0.24
C3orf38-201ENST00000318887 C20orf194Q5TEA3 1177 aa16.52■□□□□ 0.24
C3orf38-201ENST00000318887 KIAA1211Q6ZU35 1233 aa16.52■□□□□ 0.24
C3orf38-201ENST00000318887 COL17A1Q9UMD9 1497 aaPredicted RBP16.52■□□□□ 0.24
C3orf38-201ENST00000318887 PDE4CQ08493 712 aa16.52■□□□□ 0.23
C3orf38-201ENST00000318887 GZF1Q9H116 711 aaPredicted RBP16.51■□□□□ 0.23
C3orf38-201ENST00000318887 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.5■□□□□ 0.23
C3orf38-201ENST00000318887 SMAP1Q8IYB5 467 aaPredicted RBP16.5■□□□□ 0.23
C3orf38-201ENST00000318887 TRAK2O60296 914 aa16.49■□□□□ 0.23
C3orf38-201ENST00000318887 FOXD1Q16676 465 aa16.49■□□□□ 0.23
C3orf38-201ENST00000318887 KDM6BO15054 1643 aa16.49■□□□□ 0.23
C3orf38-201ENST00000318887 TCOF1Q13428 1488 aaKnown RBP16.48■□□□□ 0.23
C3orf38-201ENST00000318887 MBD5Q9P267 1494 aa16.48■□□□□ 0.23
C3orf38-201ENST00000318887 ABCC1P33527 1531 aa16.48■□□□□ 0.23
C3orf38-201ENST00000318887 KDM5CP41229 1560 aa16.48■□□□□ 0.23
C3orf38-201ENST00000318887 ABCC5O15440 1437 aa16.48■□□□□ 0.23
C3orf38-201ENST00000318887 BLMP54132 1417 aaPredicted RBP16.47■□□□□ 0.23
C3orf38-201ENST00000318887 DAPK1P53355 1430 aa16.47■□□□□ 0.23
C3orf38-201ENST00000318887 UPF2Q9HAU5 1272 aaKnown RBP16.46■□□□□ 0.23
C3orf38-201ENST00000318887 MAPK8IP3Q9UPT6 1336 aa16.46■□□□□ 0.22
C3orf38-201ENST00000318887 TSPY4P0CV99 314 aa16.46■□□□□ 0.22
C3orf38-201ENST00000318887 TSPY10P0CW01 314 aa16.46■□□□□ 0.22
C3orf38-201ENST00000318887 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.46■□□□□ 0.22
C3orf38-201ENST00000318887 MTERF4Q7Z6M4 381 aaKnown RBP16.46■□□□□ 0.22
C3orf38-201ENST00000318887 OFD1O75665 1012 aa16.45■□□□□ 0.22
C3orf38-201ENST00000318887 ARAP3Q8WWN8 1544 aa16.45■□□□□ 0.22
C3orf38-201ENST00000318887 NEO1Q92859 1461 aa16.45■□□□□ 0.22
C3orf38-201ENST00000318887 NLRP1Q9C000 1473 aa16.45■□□□□ 0.22
C3orf38-201ENST00000318887 DDX11L8A8MPP1 907 aa16.44■□□□□ 0.22
C3orf38-201ENST00000318887 PARD3Q8TEW0 1356 aa16.44■□□□□ 0.22
C3orf38-201ENST00000318887 SPAG9O60271 1321 aaKnown RBP16.44■□□□□ 0.22
C3orf38-201ENST00000318887 TBC1D2Q9BYX2 928 aa16.43■□□□□ 0.22
C3orf38-201ENST00000318887 CHMP5Q9NZZ3 219 aa16.43■□□□□ 0.22
C3orf38-201ENST00000318887 CCDC141Q6ZP82 1450 aa16.42■□□□□ 0.22
C3orf38-201ENST00000318887 RIPK4P57078 832 aa16.42■□□□□ 0.22
C3orf38-201ENST00000318887 EIF3AQ14152 1382 aaKnown RBP16.42■□□□□ 0.22
C3orf38-201ENST00000318887 POGZQ7Z3K3 1410 aa16.42■□□□□ 0.22
C3orf38-201ENST00000318887 C9orf84Q5VXU9 1444 aa16.41■□□□□ 0.22
C3orf38-201ENST00000318887 KIAA1107Q9UPP5 1409 aa16.41■□□□□ 0.22
C3orf38-201ENST00000318887 DNMT1P26358 1616 aaKnown RBP16.41■□□□□ 0.22
C3orf38-201ENST00000318887 NCLP19338 710 aaKnown RBP16.41■□□□□ 0.22
C3orf38-201ENST00000318887 SEC24BO95487 1268 aa16.41■□□□□ 0.22
C3orf38-201ENST00000318887 CFAP74Q9C0B2 1584 aa16.4■□□□□ 0.22
C3orf38-201ENST00000318887 ZSCAN30Q86W11 494 aa16.4■□□□□ 0.22
C3orf38-201ENST00000318887 E9PCH4 1651 aa16.4■□□□□ 0.22
C3orf38-201ENST00000318887 TBC1D32Q96NH3 1257 aa16.4■□□□□ 0.22
C3orf38-201ENST00000318887 YEATS2Q9ULM3 1422 aa16.39■□□□□ 0.21
C3orf38-201ENST00000318887 CCDC173Q0VFZ6 552 aa16.39■□□□□ 0.21
C3orf38-201ENST00000318887 FRMPD1Q5SYB0 1578 aa16.38■□□□□ 0.21
C3orf38-201ENST00000318887 UTP14CQ5TAP6 766 aaKnown RBP16.38■□□□□ 0.21
C3orf38-201ENST00000318887 FAM13BQ9NYF5 915 aa16.38■□□□□ 0.21
C3orf38-201ENST00000318887 ZNF518AQ6AHZ1 1483 aa16.38■□□□□ 0.21
C3orf38-201ENST00000318887 SLC4A1APQ9BWU0 796 aaKnown RBP16.37■□□□□ 0.21
C3orf38-201ENST00000318887 RICTORQ6R327 1708 aa16.37■□□□□ 0.21
C3orf38-201ENST00000318887 MSNP26038 577 aaKnown RBP16.36■□□□□ 0.21
C3orf38-201ENST00000318887 ZMYM3Q14202 1370 aa16.36■□□□□ 0.21
C3orf38-201ENST00000318887 RALGAPBQ86X10 1494 aa16.36■□□□□ 0.21
C3orf38-201ENST00000318887 ARHGEF5Q12774 1597 aa16.36■□□□□ 0.21
C3orf38-201ENST00000318887 CCDC144AA2RUR9 1427 aa16.35■□□□□ 0.21
C3orf38-201ENST00000318887 ZNF326Q5BKZ1 582 aaKnown RBP16.35■□□□□ 0.21
C3orf38-201ENST00000318887 DUSP27Q5VZP5 1158 aa16.35■□□□□ 0.21
C3orf38-201ENST00000318887 PPP1R9BQ96SB3 815 aa16.35■□□□□ 0.21
C3orf38-201ENST00000318887 CROCC2H7BZ55 1655 aa16.35■□□□□ 0.21
C3orf38-201ENST00000318887 ROCK1Q13464 1354 aa16.34■□□□□ 0.21
C3orf38-201ENST00000318887 RSPH4AQ5TD94 716 aa16.34■□□□□ 0.21
C3orf38-201ENST00000318887 UHRF1BP1Q6BDS2 1440 aa16.34■□□□□ 0.21
C3orf38-201ENST00000318887 ANP32BQ92688 251 aaKnown RBP16.33■□□□□ 0.21
C3orf38-201ENST00000318887 PTMSP20962 102 aa16.33■□□□□ 0.2
C3orf38-201ENST00000318887 ATP7AQ04656 1500 aa16.33■□□□□ 0.2
C3orf38-201ENST00000318887 ZFYVE16Q7Z3T8 1539 aa16.33■□□□□ 0.2
C3orf38-201ENST00000318887 SKOR2Q2VWA4 1001 aaPredicted RBP16.32■□□□□ 0.2
C3orf38-201ENST00000318887 ANKRD30AQ9BXX3 1397 aa16.32■□□□□ 0.2
C3orf38-201ENST00000318887 DMTNQ08495 405 aa16.32■□□□□ 0.2
C3orf38-201ENST00000318887 MLECQ14165 292 aa16.32■□□□□ 0.2
C3orf38-201ENST00000318887 CARD11Q9BXL7 1154 aa16.32■□□□□ 0.2
C3orf38-201ENST00000318887 KIDINS220Q9ULH0 1771 aa16.32■□□□□ 0.2
C3orf38-201ENST00000318887 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.32■□□□□ 0.2
C3orf38-201ENST00000318887 DYNC1I1O14576 645 aa16.31■□□□□ 0.2
C3orf38-201ENST00000318887 ZHX1Q9UKY1 873 aaPredicted RBP16.31■□□□□ 0.2
C3orf38-201ENST00000318887 IGHDP01880 384 aa16.3■□□□□ 0.2
C3orf38-201ENST00000318887 PDIA4P13667 645 aaKnown RBP16.3■□□□□ 0.2
C3orf38-201ENST00000318887 BBXQ8WY36 941 aaPredicted RBP16.3■□□□□ 0.2
C3orf38-201ENST00000318887 HECW2Q9P2P5 1572 aa16.3■□□□□ 0.2
C3orf38-201ENST00000318887 TNNT2P45379 298 aaPredicted RBP16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms