RNA–Protein interactions for RNA: ENST00000315962.8

TRIM55-202, Transcript of tripartite motif containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM55, Length 2,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-202ENST00000315962 NEO1Q92859 1461 aa10.27□□□□□ -0.77
TRIM55-202ENST00000315962 ABCA6Q8N139 1617 aa10.27□□□□□ -0.77
TRIM55-202ENST00000315962 TRPM2O94759 1503 aa10.26□□□□□ -0.77
TRIM55-202ENST00000315962 CEBPAP49715 358 aaPredicted RBP10.26□□□□□ -0.77
TRIM55-202ENST00000315962 HECW2Q9P2P5 1572 aa10.26□□□□□ -0.77
TRIM55-202ENST00000315962 NBR1Q14596 966 aa10.26□□□□□ -0.77
TRIM55-202ENST00000315962 ESF1Q9H501 851 aaKnown RBP10.26□□□□□ -0.77
TRIM55-202ENST00000315962 GPRASP1Q5JY77 1395 aa10.25□□□□□ -0.77
TRIM55-202ENST00000315962 PPRC1Q5VV67 1664 aaKnown RBP10.25□□□□□ -0.77
TRIM55-202ENST00000315962 KNSTRNQ9Y448 316 aa10.25□□□□□ -0.77
TRIM55-202ENST00000315962 TRPM1Q7Z4N2 1603 aa10.25□□□□□ -0.77
TRIM55-202ENST00000315962 PNISRQ8TF01 805 aaKnown RBP10.25□□□□□ -0.77
TRIM55-202ENST00000315962 SLC12A5Q9H2X9 1139 aa10.24□□□□□ -0.77
TRIM55-202ENST00000315962 CEP152O94986 1710 aa10.24□□□□□ -0.77
TRIM55-202ENST00000315962 EFCAB6Q5THR3 1501 aa10.23□□□□□ -0.77
TRIM55-202ENST00000315962 DEPDC5O75140 1603 aa10.23□□□□□ -0.77
TRIM55-202ENST00000315962 TET3O43151 1660 aa10.23□□□□□ -0.77
TRIM55-202ENST00000315962 VWDEQ8N2E2 1590 aa10.23□□□□□ -0.77
TRIM55-202ENST00000315962 SPHKAPQ2M3C7 1700 aa10.22□□□□□ -0.77
TRIM55-202ENST00000315962 CABP2Q9NPB3 220 aa10.22□□□□□ -0.77
TRIM55-202ENST00000315962 DIP2CQ9Y2E4 1556 aa10.22□□□□□ -0.77
TRIM55-202ENST00000315962 ABCC3O15438 1527 aa10.22□□□□□ -0.77
TRIM55-202ENST00000315962 KTN1Q86UP2 1357 aaKnown RBP10.22□□□□□ -0.77
TRIM55-202ENST00000315962 MYBBP1AQ9BQG0 1328 aaKnown RBP10.22□□□□□ -0.77
TRIM55-202ENST00000315962 VGFO15240 615 aaPredicted RBP10.22□□□□□ -0.77
TRIM55-202ENST00000315962 C14orf93Q9H972 538 aaKnown RBP10.21□□□□□ -0.77
TRIM55-202ENST00000315962 RNF17Q9BXT8 1623 aaKnown RBP10.21□□□□□ -0.77
TRIM55-202ENST00000315962 DIP2BQ9P265 1576 aa10.21□□□□□ -0.77
TRIM55-202ENST00000315962 CARD14Q9BXL6 1004 aa10.21□□□□□ -0.78
TRIM55-202ENST00000315962 MINK1Q8N4C8 1332 aaPredicted RBP10.21□□□□□ -0.78
TRIM55-202ENST00000315962 SCAF11Q99590 1463 aaKnown RBP10.2□□□□□ -0.78
TRIM55-202ENST00000315962 MAP3K4Q9Y6R4 1608 aa10.2□□□□□ -0.78
TRIM55-202ENST00000315962 CENPJQ9HC77 1338 aaPredicted RBP10.2□□□□□ -0.78
TRIM55-202ENST00000315962 RALBP1Q15311 655 aa10.2□□□□□ -0.78
TRIM55-202ENST00000315962 MADDQ8WXG6 1647 aa10.19□□□□□ -0.78
TRIM55-202ENST00000315962 WAPLQ7Z5K2 1190 aa10.19□□□□□ -0.78
TRIM55-202ENST00000315962 SRPK2P78362 688 aaKnown RBP10.19□□□□□ -0.78
TRIM55-202ENST00000315962 NLRP13Q86W25 1043 aa10.19□□□□□ -0.78
TRIM55-202ENST00000315962 PAK3O75914 559 aaPredicted RBP10.18□□□□□ -0.78
TRIM55-202ENST00000315962 PRAM1Q96QH2 718 aa10.18□□□□□ -0.78
TRIM55-202ENST00000315962 SLC52A1Q9NWF4 448 aa10.18□□□□□ -0.78
TRIM55-202ENST00000315962 CFAP74Q9C0B2 1584 aa10.18□□□□□ -0.78
TRIM55-202ENST00000315962 AMER1Q5JTC6 1135 aaPredicted RBP10.18□□□□□ -0.78
TRIM55-202ENST00000315962 CCDC146Q8IYE0 955 aa10.18□□□□□ -0.78
TRIM55-202ENST00000315962 CDCA7LQ96GN5 454 aa10.18□□□□□ -0.78
TRIM55-202ENST00000315962 POGKQ9P215 609 aa10.18□□□□□ -0.78
TRIM55-202ENST00000315962 ADAMTS8Q9UP79 889 aa10.18□□□□□ -0.78
TRIM55-202ENST00000315962 NUTM2FA1L443 756 aa10.17□□□□□ -0.78
TRIM55-202ENST00000315962 EIF2AK4Q9P2K8 1649 aaKnown RBP10.17□□□□□ -0.78
TRIM55-202ENST00000315962 RICTORQ6R327 1708 aa10.17□□□□□ -0.78
TRIM55-202ENST00000315962 MROH2AA6NES4 1674 aa10.17□□□□□ -0.78
TRIM55-202ENST00000315962 PPP4R2Q9NY27 417 aa10.17□□□□□ -0.78
TRIM55-202ENST00000315962 EIF3AQ14152 1382 aaKnown RBP10.17□□□□□ -0.78
TRIM55-202ENST00000315962 CDCA8Q53HL2 280 aa10.17□□□□□ -0.78
TRIM55-202ENST00000315962 STAC3Q96MF2 364 aa10.17□□□□□ -0.78
TRIM55-202ENST00000315962 PPP2R1AP30153 589 aa10.16□□□□□ -0.78
TRIM55-202ENST00000315962 ZBED9Q6R2W3 1325 aa10.16□□□□□ -0.78
TRIM55-202ENST00000315962 SIGLEC1Q9BZZ2 1709 aa10.16□□□□□ -0.78
TRIM55-202ENST00000315962 FANCIQ9NVI1 1328 aa10.15□□□□□ -0.78
TRIM55-202ENST00000315962 FBLN1P23142 703 aa10.15□□□□□ -0.78
TRIM55-202ENST00000315962 DEKP35659 375 aaKnown RBP10.15□□□□□ -0.78
TRIM55-202ENST00000315962 ZMYM3Q14202 1370 aa10.15□□□□□ -0.79
TRIM55-202ENST00000315962 PARD3Q8TEW0 1356 aa10.15□□□□□ -0.79
TRIM55-202ENST00000315962 PIK3C2GO75747 1445 aa10.14□□□□□ -0.79
TRIM55-202ENST00000315962 TXNDC2Q86VQ3 553 aa10.14□□□□□ -0.79
TRIM55-202ENST00000315962 LMTK2Q8IWU2 1503 aa10.14□□□□□ -0.79
TRIM55-202ENST00000315962 SYNMO15061 1565 aa10.14□□□□□ -0.79
TRIM55-202ENST00000315962 NCKAP5LQ9HCH0 1330 aa10.14□□□□□ -0.79
TRIM55-202ENST00000315962 NEUROD2Q15784 382 aa10.13□□□□□ -0.79
TRIM55-202ENST00000315962 GLI2P10070 1586 aa10.13□□□□□ -0.79
TRIM55-202ENST00000315962 SLC26A8Q96RN1 970 aa10.13□□□□□ -0.79
TRIM55-202ENST00000315962 RPGRIP1LQ68CZ1 1315 aa10.13□□□□□ -0.79
TRIM55-202ENST00000315962 NPM2Q86SE8 214 aaKnown RBP10.13□□□□□ -0.79
TRIM55-202ENST00000315962 ERVK-7P63135 1459 aa10.12□□□□□ -0.79
TRIM55-202ENST00000315962 ADGRB3O60242 1522 aa10.12□□□□□ -0.79
TRIM55-202ENST00000315962 CAMSAP1Q5T5Y3 1602 aa10.12□□□□□ -0.79
TRIM55-202ENST00000315962 WDR43Q15061 677 aaKnown RBP eCLIP10.12□□□□□ -0.79
TRIM55-202ENST00000315962 BRD4O60885 1362 aaPredicted RBP10.12□□□□□ -0.79
TRIM55-202ENST00000315962 KIF1BO60333 1816 aa10.12□□□□□ -0.79
TRIM55-202ENST00000315962 GGNBP2Q9H3C7 697 aa10.11□□□□□ -0.79
TRIM55-202ENST00000315962 MORC1Q86VD1 984 aa10.11□□□□□ -0.79
TRIM55-202ENST00000315962 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.11□□□□□ -0.79
TRIM55-202ENST00000315962 MYOM2P54296 1465 aa10.11□□□□□ -0.79
TRIM55-202ENST00000315962 PPM1GO15355 546 aaPredicted RBP10.1□□□□□ -0.79
TRIM55-202ENST00000315962 POLR1AO95602 1720 aaPredicted RBP10.1□□□□□ -0.79
TRIM55-202ENST00000315962 SLC24A1O60721 1099 aa10.1□□□□□ -0.79
TRIM55-202ENST00000315962 RBM33Q96EV2 1170 aaKnown RBP10.1□□□□□ -0.79
TRIM55-202ENST00000315962 CABP1Q9NZU7 370 aa10.1□□□□□ -0.79
TRIM55-202ENST00000315962 EVC2Q86UK5 1308 aa10.1□□□□□ -0.79
TRIM55-202ENST00000315962 PLIN1O60240 522 aa10.1□□□□□ -0.79
TRIM55-202ENST00000315962 CCDC136Q96JN2 1154 aa10.1□□□□□ -0.79
TRIM55-202ENST00000315962 PLEKHH1Q9ULM0 1364 aa10.09□□□□□ -0.79
TRIM55-202ENST00000315962 CDK19Q9BWU1 502 aa10.09□□□□□ -0.79
TRIM55-202ENST00000315962 RRP7AQ9Y3A4 280 aaKnown RBP10.09□□□□□ -0.79
TRIM55-202ENST00000315962 SKAP1Q86WV1 359 aa10.09□□□□□ -0.79
TRIM55-202ENST00000315962 NOP58Q9Y2X3 529 aaKnown RBP10.09□□□□□ -0.79
TRIM55-202ENST00000315962 ARHGAP31Q2M1Z3 1444 aa10.09□□□□□ -0.79
TRIM55-202ENST00000315962 NSD3Q9BZ95 1437 aa10.09□□□□□ -0.79
TRIM55-202ENST00000315962 LTKP29376 864 aa10.08□□□□□ -0.8
TRIM55-202ENST00000315962 APAF1O14727 1248 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms