RNA–Protein interactions for RNA: ENST00000315684.12

CTC1-201, Transcript of CST telomere replication complex component 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CTC1, Length 7,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-201ENST00000315684 RALBP1Q15311 655 aa11.37□□□□□ -0.59
CTC1-201ENST00000315684 PHLDB1Q86UU1 1377 aa11.37□□□□□ -0.59
CTC1-201ENST00000315684 PLB1Q6P1J6 1458 aa11.37□□□□□ -0.59
CTC1-201ENST00000315684 CWC22Q9HCG8 908 aaKnown RBP11.37□□□□□ -0.59
CTC1-201ENST00000315684 NOL8Q76FK4 1167 aaKnown RBP11.36□□□□□ -0.59
CTC1-201ENST00000315684 WAPLQ7Z5K2 1190 aa11.36□□□□□ -0.59
CTC1-201ENST00000315684 BECN1Q14457 450 aa11.36□□□□□ -0.59
CTC1-201ENST00000315684 BICDL1Q6ZP65 573 aa11.36□□□□□ -0.59
CTC1-201ENST00000315684 C9orf78Q9NZ63 289 aaPredicted RBP11.36□□□□□ -0.59
CTC1-201ENST00000315684 FGD6Q6ZV73 1430 aa11.35□□□□□ -0.59
CTC1-201ENST00000315684 FYB1O15117 783 aa11.35□□□□□ -0.59
CTC1-201ENST00000315684 USP47Q96K76 1375 aa11.35□□□□□ -0.59
CTC1-201ENST00000315684 RIPK4P57078 832 aa11.34□□□□□ -0.59
CTC1-201ENST00000315684 CABP1Q9NZU7 370 aa11.34□□□□□ -0.59
CTC1-201ENST00000315684 TSPYL4Q9UJ04 414 aa11.34□□□□□ -0.59
CTC1-201ENST00000315684 PPP6R1Q9UPN7 881 aa11.34□□□□□ -0.59
CTC1-201ENST00000315684 HSP90B1P14625 803 aaKnown RBP11.34□□□□□ -0.59
CTC1-201ENST00000315684 NEXNQ0ZGT2 675 aa11.34□□□□□ -0.59
CTC1-201ENST00000315684 URB2Q14146 1524 aaKnown RBP11.34□□□□□ -0.59
CTC1-201ENST00000315684 C9orf84Q5VXU9 1444 aa11.33□□□□□ -0.6
CTC1-201ENST00000315684 RIC3Q7Z5B4 369 aa11.33□□□□□ -0.6
CTC1-201ENST00000315684 GPATCH3Q96I76 525 aa11.33□□□□□ -0.6
CTC1-201ENST00000315684 FOXO3O43524 673 aa11.33□□□□□ -0.6
CTC1-201ENST00000315684 WWC3Q9ULE0 1092 aa11.32□□□□□ -0.6
CTC1-201ENST00000315684 CTDP1Q9Y5B0 961 aaPredicted RBP11.32□□□□□ -0.6
CTC1-201ENST00000315684 NBPF1Q3BBV0 1214 aa11.31□□□□□ -0.6
CTC1-201ENST00000315684 CASKIN1Q8WXD9 1431 aa11.31□□□□□ -0.6
CTC1-201ENST00000315684 LRRC9Q6ZRR7 1453 aa11.31□□□□□ -0.6
CTC1-201ENST00000315684 KIF21BO75037 1637 aa11.31□□□□□ -0.6
CTC1-201ENST00000315684 TATP17735 454 aaPredicted RBP11.31□□□□□ -0.6
CTC1-201ENST00000315684 RRS1Q15050 365 aaKnown RBP11.31□□□□□ -0.6
CTC1-201ENST00000315684 MCCP23508 829 aa11.31□□□□□ -0.6
CTC1-201ENST00000315684 NOL10Q9BSC4 688 aaKnown RBP11.31□□□□□ -0.6
CTC1-201ENST00000315684 GRIN2AQ12879 1464 aa11.31□□□□□ -0.6
CTC1-201ENST00000315684 CABP4P57796 275 aa11.3□□□□□ -0.6
CTC1-201ENST00000315684 ZNF219Q9P2Y4 722 aaPredicted RBP11.3□□□□□ -0.6
CTC1-201ENST00000315684 RCAN3Q9UKA8 241 aa11.3□□□□□ -0.6
CTC1-201ENST00000315684 ADGRL1O94910 1474 aa11.3□□□□□ -0.6
CTC1-201ENST00000315684 TIMELESSQ9UNS1 1208 aa11.3□□□□□ -0.6
CTC1-201ENST00000315684 MTMR7Q9Y216 660 aa11.3□□□□□ -0.6
CTC1-201ENST00000315684 RILPL2Q969X0 211 aa11.3□□□□□ -0.6
CTC1-201ENST00000315684 APAF1O14727 1248 aa11.3□□□□□ -0.6
CTC1-201ENST00000315684 FKBP5Q13451 457 aaPredicted RBP11.3□□□□□ -0.6
CTC1-201ENST00000315684 ERBINQ96RT1 1412 aa11.3□□□□□ -0.6
CTC1-201ENST00000315684 C8orf37Q96NL8 207 aa11.29□□□□□ -0.6
CTC1-201ENST00000315684 TOP2BQ02880 1626 aa11.29□□□□□ -0.6
CTC1-201ENST00000315684 IQGAP2Q13576 1575 aa11.29□□□□□ -0.6
CTC1-201ENST00000315684 NLRP13Q86W25 1043 aa11.29□□□□□ -0.6
CTC1-201ENST00000315684 SLC4A3P48751 1232 aa11.29□□□□□ -0.6
CTC1-201ENST00000315684 CHMP4AQ9BY43 222 aa11.29□□□□□ -0.6
CTC1-201ENST00000315684 SLC12A5Q9H2X9 1139 aa11.29□□□□□ -0.6
CTC1-201ENST00000315684 FYCO1Q9BQS8 1478 aa11.29□□□□□ -0.6
CTC1-201ENST00000315684 CCDC27Q2M243 656 aa11.29□□□□□ -0.6
CTC1-201ENST00000315684 NCKAP5LQ9HCH0 1330 aa11.28□□□□□ -0.6
CTC1-201ENST00000315684 APPP05067 770 aa11.28□□□□□ -0.6
CTC1-201ENST00000315684 MYL6BP14649 208 aa11.28□□□□□ -0.6
CTC1-201ENST00000315684 GOLGA6L22H0YM25 854 aa11.28□□□□□ -0.6
CTC1-201ENST00000315684 AMOTL2Q9Y2J4 779 aa11.28□□□□□ -0.6
CTC1-201ENST00000315684 HECW1Q76N89 1606 aa11.28□□□□□ -0.6
CTC1-201ENST00000315684 DMRT2Q9Y5R5 561 aa11.28□□□□□ -0.6
CTC1-201ENST00000315684 USHBP1Q8N6Y0 703 aa11.27□□□□□ -0.6
CTC1-201ENST00000315684 ARAP1Q96P48 1450 aa11.27□□□□□ -0.6
CTC1-201ENST00000315684 KIAA0586Q9BVV6 1533 aa11.27□□□□□ -0.61
CTC1-201ENST00000315684 MIA2Q96PC5 1412 aa11.27□□□□□ -0.61
CTC1-201ENST00000315684 GOLGA6L4A6NEF3 574 aa11.27□□□□□ -0.61
CTC1-201ENST00000315684 TROQ12816 1431 aaPredicted RBP11.27□□□□□ -0.61
CTC1-201ENST00000315684 KIF6Q6ZMV9 814 aa11.27□□□□□ -0.61
CTC1-201ENST00000315684 MARCH6O60337 910 aa11.26□□□□□ -0.61
CTC1-201ENST00000315684 RTEL1-TNFRSF6BF6WH68 1400 aa11.26□□□□□ -0.61
CTC1-201ENST00000315684 HMMRO75330 724 aa11.26□□□□□ -0.61
CTC1-201ENST00000315684 SLC52A1Q9NWF4 448 aa11.26□□□□□ -0.61
CTC1-201ENST00000315684 DHX16O60231 1041 aaKnown RBP11.25□□□□□ -0.61
CTC1-201ENST00000315684 DDX58O95786 925 aaKnown RBP11.25□□□□□ -0.61
CTC1-201ENST00000315684 NEUROD6Q96NK8 337 aa11.25□□□□□ -0.61
CTC1-201ENST00000315684 PLEKHO1Q53GL0 409 aaPredicted RBP11.25□□□□□ -0.61
CTC1-201ENST00000315684 PAXIP1Q6ZW49 1069 aaPredicted RBP11.25□□□□□ -0.61
CTC1-201ENST00000315684 MTHFSP49914 203 aa11.25□□□□□ -0.61
CTC1-201ENST00000315684 FOXD4L1Q9NU39 408 aa11.25□□□□□ -0.61
CTC1-201ENST00000315684 SMG6Q86US8 1419 aaKnown RBP11.25□□□□□ -0.61
CTC1-201ENST00000315684 PHF14O94880 888 aa11.25□□□□□ -0.61
CTC1-201ENST00000315684 PDE4CQ08493 712 aa11.25□□□□□ -0.61
CTC1-201ENST00000315684 MAGI1Q96QZ7 1491 aaPredicted RBP11.24□□□□□ -0.61
CTC1-201ENST00000315684 RRBP1Q9P2E9 1410 aaKnown RBP11.24□□□□□ -0.61
CTC1-201ENST00000315684 DDRGK1Q96HY6 314 aa11.24□□□□□ -0.61
CTC1-201ENST00000315684 TOM1O60784 492 aa11.24□□□□□ -0.61
CTC1-201ENST00000315684 SULT6B1Q6IMI4 303 aa11.24□□□□□ -0.61
CTC1-201ENST00000315684 RASSF8Q8NHQ8 419 aa11.24□□□□□ -0.61
CTC1-201ENST00000315684 PTCD1O75127 700 aaKnown RBP11.23□□□□□ -0.61
CTC1-201ENST00000315684 CHRNA2Q15822 529 aa11.23□□□□□ -0.61
CTC1-201ENST00000315684 MFAP1P55081 439 aaKnown RBP11.23□□□□□ -0.61
CTC1-201ENST00000315684 MPRIPQ6WCQ1 1025 aa11.23□□□□□ -0.61
CTC1-201ENST00000315684 CREBRFQ8IUR6 639 aa11.23□□□□□ -0.61
CTC1-201ENST00000315684 MYBBP1AQ9BQG0 1328 aaKnown RBP11.23□□□□□ -0.61
CTC1-201ENST00000315684 KDM4AO75164 1064 aa11.23□□□□□ -0.61
CTC1-201ENST00000315684 ZNF530Q6P9A1 599 aaPredicted RBP11.23□□□□□ -0.61
CTC1-201ENST00000315684 CCDC85AQ96PX6 553 aaPredicted RBP11.23□□□□□ -0.61
CTC1-201ENST00000315684 RWDD1Q9H446 243 aaPredicted RBP11.23□□□□□ -0.61
CTC1-201ENST00000315684 HDAC5Q9UQL6 1122 aa11.23□□□□□ -0.61
CTC1-201ENST00000315684 PTMAP06454 111 aaKnown RBP11.23□□□□□ -0.61
CTC1-201ENST00000315684 RBM5P52756 815 aaKnown RBP eCLIP11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 147.8 ms