RNA–Protein interactions for RNA: ENST00000308330.2

LEMD3-201, Transcript of LEM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LEMD3, Length 4,764 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-201ENST00000308330 VGLL3A8MV65 326 aa18.93■□□□□ 0.62
LEMD3-201ENST00000308330 ZNF608Q9ULD9 1512 aaPredicted RBP18.92■□□□□ 0.62
LEMD3-201ENST00000308330 FRAT2O75474 233 aaPredicted RBP18.92■□□□□ 0.62
LEMD3-201ENST00000308330 RALBP1Q15311 655 aa18.92■□□□□ 0.62
LEMD3-201ENST00000308330 DNAJC2Q99543 621 aaKnown RBP18.92■□□□□ 0.62
LEMD3-201ENST00000308330 TROQ12816 1431 aaPredicted RBP18.92■□□□□ 0.62
LEMD3-201ENST00000308330 TEX35Q5T0J7 233 aa18.92■□□□□ 0.62
LEMD3-201ENST00000308330 DHX57Q6P158 1386 aaKnown RBP18.91■□□□□ 0.62
LEMD3-201ENST00000308330 FYCO1Q9BQS8 1478 aa18.91■□□□□ 0.62
LEMD3-201ENST00000308330 OS9Q13438 667 aaPredicted RBP18.91■□□□□ 0.62
LEMD3-201ENST00000308330 UQCRHLA0A096LP55 91 aa18.91■□□□□ 0.62
LEMD3-201ENST00000308330 UQCRHP07919 91 aa18.91■□□□□ 0.62
LEMD3-201ENST00000308330 URB2Q14146 1524 aaKnown RBP18.9■□□□□ 0.62
LEMD3-201ENST00000308330 PSME1Q06323 249 aa18.9■□□□□ 0.62
LEMD3-201ENST00000308330 ATF3P18847 181 aa18.9■□□□□ 0.62
LEMD3-201ENST00000308330 TMEM132EQ6IEE7 984 aa18.89■□□□□ 0.62
LEMD3-201ENST00000308330 MS4A1P11836 297 aa18.89■□□□□ 0.61
LEMD3-201ENST00000308330 PANK3Q9H999 370 aa18.89■□□□□ 0.61
LEMD3-201ENST00000308330 COG3Q96JB2 828 aa18.88■□□□□ 0.61
LEMD3-201ENST00000308330 HMGB1P09429 215 aaKnown RBP18.87■□□□□ 0.61
LEMD3-201ENST00000308330 EVA1CP58658 441 aa18.87■□□□□ 0.61
LEMD3-201ENST00000308330 SMAP1Q8IYB5 467 aaPredicted RBP18.87■□□□□ 0.61
LEMD3-201ENST00000308330 GPS2Q13227 327 aa18.87■□□□□ 0.61
LEMD3-201ENST00000308330 THEMISQ8N1K5 641 aaPredicted RBP18.87■□□□□ 0.61
LEMD3-201ENST00000308330 FAM193AP78312 1265 aa18.86■□□□□ 0.61
LEMD3-201ENST00000308330 ZNF526Q8TF50 670 aaPredicted RBP18.86■□□□□ 0.61
LEMD3-201ENST00000308330 HTATSF1O43719 755 aaKnown RBP18.86■□□□□ 0.61
LEMD3-201ENST00000308330 NRDCO43847 1150 aa18.85■□□□□ 0.61
LEMD3-201ENST00000308330 LETM1O95202 739 aaPredicted RBP18.85■□□□□ 0.61
LEMD3-201ENST00000308330 SKOR2Q2VWA4 1001 aaPredicted RBP18.85■□□□□ 0.61
LEMD3-201ENST00000308330 CLCN1P35523 988 aa18.85■□□□□ 0.61
LEMD3-201ENST00000308330 MAGI1Q96QZ7 1491 aaPredicted RBP18.85■□□□□ 0.61
LEMD3-201ENST00000308330 KCNJ4P48050 445 aa18.85■□□□□ 0.61
LEMD3-201ENST00000308330 GRIN2AQ12879 1464 aa18.84■□□□□ 0.61
LEMD3-201ENST00000308330 AXDND1Q5T1B0 1012 aaPredicted RBP18.84■□□□□ 0.61
LEMD3-201ENST00000308330 CWC15Q9P013 229 aaKnown RBP18.84■□□□□ 0.61
LEMD3-201ENST00000308330 NLRP13Q86W25 1043 aa18.83■□□□□ 0.61
LEMD3-201ENST00000308330 DRC7Q8IY82 874 aa18.83■□□□□ 0.61
LEMD3-201ENST00000308330 STAC3Q96MF2 364 aa18.83■□□□□ 0.61
LEMD3-201ENST00000308330 EFCAB5A4FU69 1503 aa18.83■□□□□ 0.61
LEMD3-201ENST00000308330 PROSER2Q86WR7 435 aaPredicted RBP18.83■□□□□ 0.6
LEMD3-201ENST00000308330 HMGN5P82970 282 aaKnown RBP18.82■□□□□ 0.6
LEMD3-201ENST00000308330 CBX1P83916 185 aa18.82■□□□□ 0.6
LEMD3-201ENST00000308330 GOLGA2Q08379 1002 aa18.82■□□□□ 0.6
LEMD3-201ENST00000308330 DEF6Q9H4E7 631 aa18.82■□□□□ 0.6
LEMD3-201ENST00000308330 CENPJQ9HC77 1338 aaPredicted RBP18.82■□□□□ 0.6
LEMD3-201ENST00000308330 CD109Q6YHK3 1445 aa18.81■□□□□ 0.6
LEMD3-201ENST00000308330 CFAP70Q5T0N1 1121 aa18.81■□□□□ 0.6
LEMD3-201ENST00000308330 CGNL1Q0VF96 1302 aa18.8■□□□□ 0.6
LEMD3-201ENST00000308330 TPRNQ4KMQ1 711 aa18.8■□□□□ 0.6
LEMD3-201ENST00000308330 USP47Q96K76 1375 aa18.8■□□□□ 0.6
LEMD3-201ENST00000308330 BCCIPQ9P287 314 aaKnown RBP eCLIP18.8■□□□□ 0.6
LEMD3-201ENST00000308330 PLB1Q6P1J6 1458 aa18.79■□□□□ 0.6
LEMD3-201ENST00000308330 CCDC146Q8IYE0 955 aa18.79■□□□□ 0.6
LEMD3-201ENST00000308330 GPATCH11Q8N954 259 aa18.79■□□□□ 0.6
LEMD3-201ENST00000308330 KIF3AQ9Y496 699 aa18.79■□□□□ 0.6
LEMD3-201ENST00000308330 CALCOCO1Q9P1Z2 691 aa18.79■□□□□ 0.6
LEMD3-201ENST00000308330 SLC52A1Q9NWF4 448 aa18.78■□□□□ 0.6
LEMD3-201ENST00000308330 PLEKHH2Q8IVE3 1493 aa18.78■□□□□ 0.6
LEMD3-201ENST00000308330 PPP4R3BQ5MIZ7 849 aa18.78■□□□□ 0.6
LEMD3-201ENST00000308330 C9orf84Q5VXU9 1444 aa18.78■□□□□ 0.6
LEMD3-201ENST00000308330 PEG3Q9GZU2 1588 aa18.78■□□□□ 0.6
LEMD3-201ENST00000308330 SLC26A8Q96RN1 970 aa18.78■□□□□ 0.6
LEMD3-201ENST00000308330 GTPBP4Q9BZE4 634 aaKnown RBP18.78■□□□□ 0.6
LEMD3-201ENST00000308330 STK31Q9BXU1 1019 aa18.77■□□□□ 0.59
LEMD3-201ENST00000308330 DIAPH3Q9NSV4 1193 aa18.76■□□□□ 0.59
LEMD3-201ENST00000308330 FAM161AQ3B820 660 aa18.76■□□□□ 0.59
LEMD3-201ENST00000308330 POGZQ7Z3K3 1410 aa18.75■□□□□ 0.59
LEMD3-201ENST00000308330 IQGAP2Q13576 1575 aa18.75■□□□□ 0.59
LEMD3-201ENST00000308330 UNC13AQ9UPW8 1703 aa18.75■□□□□ 0.59
LEMD3-201ENST00000308330 MEX3CQ5U5Q3 659 aaKnown RBP18.75■□□□□ 0.59
LEMD3-201ENST00000308330 ANKLE2Q86XL3 938 aa18.75■□□□□ 0.59
LEMD3-201ENST00000308330 IPO8O15397 1037 aaKnown RBP18.75■□□□□ 0.59
LEMD3-201ENST00000308330 CCDC173Q0VFZ6 552 aa18.75■□□□□ 0.59
LEMD3-201ENST00000308330 KIF20AO95235 890 aa18.74■□□□□ 0.59
LEMD3-201ENST00000308330 NASPP49321 788 aaPredicted RBP18.73■□□□□ 0.59
LEMD3-201ENST00000308330 HDAC5Q9UQL6 1122 aa18.73■□□□□ 0.59
LEMD3-201ENST00000308330 WASHC2AQ641Q2 1341 aa18.73■□□□□ 0.59
LEMD3-201ENST00000308330 NUTM2GQ5VZR2 741 aa18.73■□□□□ 0.59
LEMD3-201ENST00000308330 ISY1Q9ULR0 285 aaKnown RBP18.73■□□□□ 0.59
LEMD3-201ENST00000308330 SYAP1Q96A49 352 aaPredicted RBP18.73■□□□□ 0.59
LEMD3-201ENST00000308330 TIGD1Q96MW7 591 aa18.73■□□□□ 0.59
LEMD3-201ENST00000308330 MIA2Q96PC5 1412 aa18.73■□□□□ 0.59
LEMD3-201ENST00000308330 CDK13Q14004 1512 aaKnown RBP18.72■□□□□ 0.59
LEMD3-201ENST00000308330 CASC1Q6TDU7 716 aa18.72■□□□□ 0.59
LEMD3-201ENST00000308330 CABP2Q9NPB3 220 aa18.72■□□□□ 0.59
LEMD3-201ENST00000308330 DDX49Q9Y6V7 483 aaKnown RBP18.72■□□□□ 0.59
LEMD3-201ENST00000308330 SSR1P43307 286 aaKnown RBP18.72■□□□□ 0.59
LEMD3-201ENST00000308330 GTF2A1P52655 376 aaPredicted RBP18.72■□□□□ 0.59
LEMD3-201ENST00000308330 EPRSP07814 1512 aaKnown RBP18.72■□□□□ 0.59
LEMD3-201ENST00000308330 LMOD3Q0VAK6 560 aa18.71■□□□□ 0.59
LEMD3-201ENST00000308330 ZFP91Q96JP5 570 aaPredicted RBP18.71■□□□□ 0.59
LEMD3-201ENST00000308330 RRP7AQ9Y3A4 280 aaKnown RBP18.71■□□□□ 0.59
LEMD3-201ENST00000308330 TNNT1P13805 278 aa18.7■□□□□ 0.58
LEMD3-201ENST00000308330 NLRP6P59044 892 aa18.7■□□□□ 0.58
LEMD3-201ENST00000308330 ERICH4A6NGS2 130 aa18.7■□□□□ 0.58
LEMD3-201ENST00000308330 APBB1O00213 710 aa18.7■□□□□ 0.58
LEMD3-201ENST00000308330 ESCO1Q5FWF5 840 aa18.7■□□□□ 0.58
LEMD3-201ENST00000308330 PLCD4Q9BRC7 762 aa18.7■□□□□ 0.58
LEMD3-201ENST00000308330 GRPEL1Q9HAV7 217 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms