RNA–Protein interactions for RNA: ENST00000296302.11

PBRM1-201, Transcript of polybromo 1, humanhuman

TSL 1 (best) BASIC

Gene PBRM1, Length 5,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-201ENST00000296302 BACH2Q9BYV9 841 aa13.46□□□□□ -0.25
PBRM1-201ENST00000296302 ANO8Q9HCE9 1232 aaPredicted RBP13.46□□□□□ -0.25
PBRM1-201ENST00000296302 TPM1P09493 284 aa13.46□□□□□ -0.25
PBRM1-201ENST00000296302 PDS5BQ9NTI5 1447 aa13.46□□□□□ -0.25
PBRM1-201ENST00000296302 CCAR2Q8N163 923 aaKnown RBP13.46□□□□□ -0.25
PBRM1-201ENST00000296302 TSR1Q2NL82 804 aaKnown RBP13.46□□□□□ -0.26
PBRM1-201ENST00000296302 FGD6Q6ZV73 1430 aa13.46□□□□□ -0.26
PBRM1-201ENST00000296302 RASSF8Q8NHQ8 419 aa13.45□□□□□ -0.26
PBRM1-201ENST00000296302 EVC2Q86UK5 1308 aa13.45□□□□□ -0.26
PBRM1-201ENST00000296302 CCDC70Q6NSX1 233 aa13.45□□□□□ -0.26
PBRM1-201ENST00000296302 CHMP3Q9Y3E7 222 aa13.45□□□□□ -0.26
PBRM1-201ENST00000296302 CCDC173Q0VFZ6 552 aa13.44□□□□□ -0.26
PBRM1-201ENST00000296302 CLSTN1O94985 981 aa13.44□□□□□ -0.26
PBRM1-201ENST00000296302 TAF7LQ5H9L4 462 aa13.43□□□□□ -0.26
PBRM1-201ENST00000296302 ARGLU1Q9NWB6 273 aaPredicted RBP13.43□□□□□ -0.26
PBRM1-201ENST00000296302 CDC45O75419 566 aa13.43□□□□□ -0.26
PBRM1-201ENST00000296302 CREBRFQ8IUR6 639 aa13.43□□□□□ -0.26
PBRM1-201ENST00000296302 LNPKQ9C0E8 428 aa13.43□□□□□ -0.26
PBRM1-201ENST00000296302 MBD3O95983 291 aa13.43□□□□□ -0.26
PBRM1-201ENST00000296302 TPD52L1Q16890 204 aaPredicted RBP13.43□□□□□ -0.26
PBRM1-201ENST00000296302 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.43□□□□□ -0.26
PBRM1-201ENST00000296302 KIF21BO75037 1637 aa13.42□□□□□ -0.26
PBRM1-201ENST00000296302 HMGN5P82970 282 aaKnown RBP13.42□□□□□ -0.26
PBRM1-201ENST00000296302 HOMER1Q86YM7 354 aa13.42□□□□□ -0.26
PBRM1-201ENST00000296302 BICD2Q8TD16 824 aa13.42□□□□□ -0.26
PBRM1-201ENST00000296302 ANO2Q9NQ90 1003 aa13.42□□□□□ -0.26
PBRM1-201ENST00000296302 SMC3Q9UQE7 1217 aa13.42□□□□□ -0.26
PBRM1-201ENST00000296302 MYOM3Q5VTT5 1437 aa13.42□□□□□ -0.26
PBRM1-201ENST00000296302 PANK1Q8TE04 598 aa13.42□□□□□ -0.26
PBRM1-201ENST00000296302 PKNOX2Q96KN3 472 aa13.42□□□□□ -0.26
PBRM1-201ENST00000296302 STAC3Q96MF2 364 aa13.42□□□□□ -0.26
PBRM1-201ENST00000296302 AMPHP49418 695 aa13.42□□□□□ -0.26
PBRM1-201ENST00000296302 MLECQ14165 292 aa13.42□□□□□ -0.26
PBRM1-201ENST00000296302 SASS6Q6UVJ0 657 aa13.42□□□□□ -0.26
PBRM1-201ENST00000296302 IFT57Q9NWB7 429 aa13.41□□□□□ -0.26
PBRM1-201ENST00000296302 CUX1P39880 1505 aa13.41□□□□□ -0.26
PBRM1-201ENST00000296302 DIAPH1O60610 1272 aaKnown RBP13.41□□□□□ -0.26
PBRM1-201ENST00000296302 SMG6Q86US8 1419 aaKnown RBP13.41□□□□□ -0.26
PBRM1-201ENST00000296302 RIPK4P57078 832 aa13.41□□□□□ -0.26
PBRM1-201ENST00000296302 CADPSQ9ULU8 1353 aa13.41□□□□□ -0.26
PBRM1-201ENST00000296302 RNF20Q5VTR2 975 aa13.4□□□□□ -0.26
PBRM1-201ENST00000296302 CPLX2Q6PUV4 134 aaKnown RBP13.4□□□□□ -0.26
PBRM1-201ENST00000296302 LETM1O95202 739 aaPredicted RBP13.4□□□□□ -0.26
PBRM1-201ENST00000296302 RRBP1Q9P2E9 1410 aaKnown RBP13.4□□□□□ -0.26
PBRM1-201ENST00000296302 PDE3AQ14432 1141 aa13.4□□□□□ -0.26
PBRM1-201ENST00000296302 WASHC2CQ9Y4E1 1318 aa13.39□□□□□ -0.27
PBRM1-201ENST00000296302 LRRC9Q6ZRR7 1453 aa13.39□□□□□ -0.27
PBRM1-201ENST00000296302 LRRFIP1Q32MZ4 808 aaKnown RBP13.39□□□□□ -0.27
PBRM1-201ENST00000296302 VPS37CA5D8V6 355 aaPredicted RBP13.38□□□□□ -0.27
PBRM1-201ENST00000296302 COG3Q96JB2 828 aa13.38□□□□□ -0.27
PBRM1-201ENST00000296302 ADAMTS8Q9UP79 889 aa13.38□□□□□ -0.27
PBRM1-201ENST00000296302 MNS1Q8NEH6 495 aa13.38□□□□□ -0.27
PBRM1-201ENST00000296302 CDCA7LQ96GN5 454 aa13.38□□□□□ -0.27
PBRM1-201ENST00000296302 CSB-PGBD3P0DP91 1061 aa13.38□□□□□ -0.27
PBRM1-201ENST00000296302 GNAI1P63096 354 aa13.38□□□□□ -0.27
PBRM1-201ENST00000296302 PES1O00541 588 aaKnown RBP13.38□□□□□ -0.27
PBRM1-201ENST00000296302 VGFO15240 615 aaPredicted RBP13.38□□□□□ -0.27
PBRM1-201ENST00000296302 IPO7O95373 1038 aaKnown RBP13.38□□□□□ -0.27
PBRM1-201ENST00000296302 NOM1Q5C9Z4 860 aaKnown RBP13.38□□□□□ -0.27
PBRM1-201ENST00000296302 CAVIN1Q6NZI2 390 aaKnown RBP13.38□□□□□ -0.27
PBRM1-201ENST00000296302 AKNAQ7Z591 1439 aa13.38□□□□□ -0.27
PBRM1-201ENST00000296302 CCDC66A2RUB6 948 aa13.37□□□□□ -0.27
PBRM1-201ENST00000296302 ZNF330Q9Y3S2 320 aaPredicted RBP13.37□□□□□ -0.27
PBRM1-201ENST00000296302 ACBD3Q9H3P7 528 aa13.37□□□□□ -0.27
PBRM1-201ENST00000296302 TOMM22Q9NS69 142 aa13.37□□□□□ -0.27
PBRM1-201ENST00000296302 HOOK1Q9UJC3 728 aaKnown RBP13.37□□□□□ -0.27
PBRM1-201ENST00000296302 RRP9O43818 475 aaKnown RBP13.37□□□□□ -0.27
PBRM1-201ENST00000296302 CCDC73Q6ZRK6 1079 aa13.37□□□□□ -0.27
PBRM1-201ENST00000296302 NGDNQ8NEJ9 315 aaKnown RBP13.37□□□□□ -0.27
PBRM1-201ENST00000296302 MCM2P49736 904 aa13.36□□□□□ -0.27
PBRM1-201ENST00000296302 RABEP1Q15276 862 aa13.36□□□□□ -0.27
PBRM1-201ENST00000296302 PDZRN3Q9UPQ7 1066 aa13.36□□□□□ -0.27
PBRM1-201ENST00000296302 ANKRD20A12PQ8NF67 263 aa13.36□□□□□ -0.27
PBRM1-201ENST00000296302 RNF214Q8ND24 703 aa13.36□□□□□ -0.27
PBRM1-201ENST00000296302 NINLQ9Y2I6 1382 aa13.36□□□□□ -0.27
PBRM1-201ENST00000296302 IFIT2P09913 472 aaKnown RBP13.35□□□□□ -0.27
PBRM1-201ENST00000296302 CEP89Q96ST8 783 aa13.35□□□□□ -0.27
PBRM1-201ENST00000296302 TSPY26PQ9H489 355 aa13.35□□□□□ -0.27
PBRM1-201ENST00000296302 HSP90AB4PQ58FF6 505 aa13.35□□□□□ -0.27
PBRM1-201ENST00000296302 GRPEL1Q9HAV7 217 aa13.35□□□□□ -0.27
PBRM1-201ENST00000296302 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.35□□□□□ -0.27
PBRM1-201ENST00000296302 AKAP17AQ02040 695 aaKnown RBP13.35□□□□□ -0.27
PBRM1-201ENST00000296302 TRIM29Q14134 588 aa13.34□□□□□ -0.27
PBRM1-201ENST00000296302 NUTM2DQ5VT03 806 aaPredicted RBP13.34□□□□□ -0.27
PBRM1-201ENST00000296302 SYNE3Q6ZMZ3 975 aa13.34□□□□□ -0.27
PBRM1-201ENST00000296302 SMARCA4P51532 1647 aa13.34□□□□□ -0.27
PBRM1-201ENST00000296302 PNISRQ8TF01 805 aaKnown RBP13.34□□□□□ -0.27
PBRM1-201ENST00000296302 NAT10Q9H0A0 1025 aaKnown RBP13.34□□□□□ -0.27
PBRM1-201ENST00000296302 CPLX1O14810 134 aa13.33□□□□□ -0.28
PBRM1-201ENST00000296302 HSP90B2PQ58FF3 399 aa13.33□□□□□ -0.28
PBRM1-201ENST00000296302 ATAD2BQ9ULI0 1458 aa13.33□□□□□ -0.28
PBRM1-201ENST00000296302 ERC2O15083 957 aa13.33□□□□□ -0.28
PBRM1-201ENST00000296302 CWC22Q9HCG8 908 aaKnown RBP13.33□□□□□ -0.28
PBRM1-201ENST00000296302 CWC15Q9P013 229 aaKnown RBP13.33□□□□□ -0.28
PBRM1-201ENST00000296302 CIZ1Q9ULV3 898 aaPredicted RBP13.33□□□□□ -0.28
PBRM1-201ENST00000296302 ESPNB1AK53 854 aa13.32□□□□□ -0.28
PBRM1-201ENST00000296302 C9orf78Q9NZ63 289 aaPredicted RBP13.32□□□□□ -0.28
PBRM1-201ENST00000296302 PRPF40AO75400 957 aaKnown RBP13.32□□□□□ -0.28
PBRM1-201ENST00000296302 IGF1RP08069 1367 aa13.32□□□□□ -0.28
PBRM1-201ENST00000296302 NEXNQ0ZGT2 675 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms