RNA–Protein interactions for RNA: ENST00000274065.8

RPS3A-201, Transcript of ribosomal protein S3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPS3A, Length 934 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3A-201ENST00000274065 TIAM1Q13009 1591 aa13.6□□□□□ -0.23
RPS3A-201ENST00000274065 FAM135BQ49AJ0 1406 aa13.58□□□□□ -0.24
RPS3A-201ENST00000274065 LTKP29376 864 aa13.58□□□□□ -0.24
RPS3A-201ENST00000274065 ZC3H13Q5T200 1668 aaKnown RBP13.58□□□□□ -0.24
RPS3A-201ENST00000274065 CCDC141Q6ZP82 1450 aa13.57□□□□□ -0.24
RPS3A-201ENST00000274065 ZRANB1Q9UGI0 708 aa13.57□□□□□ -0.24
RPS3A-201ENST00000274065 SCAF11Q99590 1463 aaKnown RBP13.56□□□□□ -0.24
RPS3A-201ENST00000274065 SETD1AO15047 1707 aaKnown RBP13.56□□□□□ -0.24
RPS3A-201ENST00000274065 ERVK-7P63135 1459 aa13.55□□□□□ -0.24
RPS3A-201ENST00000274065 NCOA2Q15596 1464 aa13.55□□□□□ -0.24
RPS3A-201ENST00000274065 ABCC3O15438 1527 aa13.54□□□□□ -0.24
RPS3A-201ENST00000274065 TXNDC2Q86VQ3 553 aa13.54□□□□□ -0.24
RPS3A-201ENST00000274065 XIRP1Q702N8 1843 aaKnown RBP13.54□□□□□ -0.24
RPS3A-201ENST00000274065 SRCAPQ6ZRS2 3230 aa13.54□□□□□ -0.24
RPS3A-201ENST00000274065 CEP162Q5TB80 1403 aa13.53□□□□□ -0.24
RPS3A-201ENST00000274065 TMEM94Q12767 1356 aa13.52□□□□□ -0.25
RPS3A-201ENST00000274065 CAMSAP2Q08AD1 1489 aa13.52□□□□□ -0.25
RPS3A-201ENST00000274065 ARHGAP23Q9P227 1491 aa13.52□□□□□ -0.25
RPS3A-201ENST00000274065 UBR1Q8IWV7 1749 aa13.51□□□□□ -0.25
RPS3A-201ENST00000274065 EHBP1L1Q8N3D4 1523 aa13.51□□□□□ -0.25
RPS3A-201ENST00000274065 RSPH4AQ5TD94 716 aa13.51□□□□□ -0.25
RPS3A-201ENST00000274065 RBM33Q96EV2 1170 aaKnown RBP13.51□□□□□ -0.25
RPS3A-201ENST00000274065 SLIT1O75093 1534 aa13.5□□□□□ -0.25
RPS3A-201ENST00000274065 PAK3O75914 559 aaPredicted RBP13.49□□□□□ -0.25
RPS3A-201ENST00000274065 UPF1Q92900 1129 aaKnown RBP eCLIP13.49□□□□□ -0.25
RPS3A-201ENST00000274065 ROBO1Q9Y6N7 1651 aa13.49□□□□□ -0.25
RPS3A-201ENST00000274065 POTEIP0CG38 1075 aa13.48□□□□□ -0.25
RPS3A-201ENST00000274065 TSPY4P0CV99 314 aa13.48□□□□□ -0.25
RPS3A-201ENST00000274065 TSPY10P0CW01 314 aa13.48□□□□□ -0.25
RPS3A-201ENST00000274065 MAP3K1Q13233 1512 aa13.48□□□□□ -0.25
RPS3A-201ENST00000274065 EID1Q9Y6B2 187 aa13.47□□□□□ -0.25
RPS3A-201ENST00000274065 MROH1Q8NDA8 1641 aa13.46□□□□□ -0.25
RPS3A-201ENST00000274065 PROSER2Q86WR7 435 aaPredicted RBP13.46□□□□□ -0.25
RPS3A-201ENST00000274065 KCNA6P17658 529 aa13.45□□□□□ -0.26
RPS3A-201ENST00000274065 ARHGEF5Q12774 1597 aa13.45□□□□□ -0.26
RPS3A-201ENST00000274065 JCADQ9P266 1359 aa13.45□□□□□ -0.26
RPS3A-201ENST00000274065 TMEM2Q9UHN6 1383 aa13.45□□□□□ -0.26
RPS3A-201ENST00000274065 TRIM52Q96A61 297 aa13.44□□□□□ -0.26
RPS3A-201ENST00000274065 SLC26A8Q96RN1 970 aa13.44□□□□□ -0.26
RPS3A-201ENST00000274065 CFAP65Q6ZU64 1925 aaKnown RBP13.43□□□□□ -0.26
RPS3A-201ENST00000274065 LRRC9Q6ZRR7 1453 aa13.42□□□□□ -0.26
RPS3A-201ENST00000274065 CEP152O94986 1710 aa13.42□□□□□ -0.26
RPS3A-201ENST00000274065 FKBP8Q14318 412 aa13.42□□□□□ -0.26
RPS3A-201ENST00000274065 LRP6O75581 1613 aa13.42□□□□□ -0.26
RPS3A-201ENST00000274065 PRDM15P57071 1507 aaPredicted RBP13.41□□□□□ -0.26
RPS3A-201ENST00000274065 SLAIN2Q9P270 581 aa13.41□□□□□ -0.26
RPS3A-201ENST00000274065 ARHGAP31Q2M1Z3 1444 aa13.4□□□□□ -0.26
RPS3A-201ENST00000274065 PIK3C2BO00750 1634 aa13.4□□□□□ -0.26
RPS3A-201ENST00000274065 EIF2AK4Q9P2K8 1649 aaKnown RBP13.4□□□□□ -0.26
RPS3A-201ENST00000274065 PHF12Q96QT6 1004 aa13.4□□□□□ -0.26
RPS3A-201ENST00000274065 MSH6P52701 1360 aa13.4□□□□□ -0.26
RPS3A-201ENST00000274065 MAST1Q9Y2H9 1570 aa13.4□□□□□ -0.26
RPS3A-201ENST00000274065 PHLPP1O60346 1717 aa13.39□□□□□ -0.27
RPS3A-201ENST00000274065 GALR2O43603 387 aaPredicted RBP13.39□□□□□ -0.27
RPS3A-201ENST00000274065 TET3O43151 1660 aa13.39□□□□□ -0.27
RPS3A-201ENST00000274065 NKTRP30414 1462 aaKnown RBP13.38□□□□□ -0.27
RPS3A-201ENST00000274065 ZNF772Q68DY9 489 aaPredicted RBP13.38□□□□□ -0.27
RPS3A-201ENST00000274065 DCBLD2Q96PD2 775 aa13.38□□□□□ -0.27
RPS3A-201ENST00000274065 COL16A1Q07092 1604 aaPredicted RBP13.38□□□□□ -0.27
RPS3A-201ENST00000274065 IDI1Q13907 227 aa13.37□□□□□ -0.27
RPS3A-201ENST00000274065 MEX3CQ5U5Q3 659 aaKnown RBP13.37□□□□□ -0.27
RPS3A-201ENST00000274065 SPATA31A6Q5VVP1 1343 aa13.37□□□□□ -0.27
RPS3A-201ENST00000274065 NWD1Q149M9 1564 aa13.37□□□□□ -0.27
RPS3A-201ENST00000274065 EFCAB6Q5THR3 1501 aa13.36□□□□□ -0.27
RPS3A-201ENST00000274065 PLEKHG5O94827 1062 aa13.36□□□□□ -0.27
RPS3A-201ENST00000274065 MIER1Q8N108 512 aa13.36□□□□□ -0.27
RPS3A-201ENST00000274065 DUOX2Q9NRD8 1548 aa13.35□□□□□ -0.27
RPS3A-201ENST00000274065 RXRBP28702 533 aa13.35□□□□□ -0.27
RPS3A-201ENST00000274065 FGD6Q6ZV73 1430 aa13.34□□□□□ -0.27
RPS3A-201ENST00000274065 LHX8Q68G74 356 aa13.34□□□□□ -0.27
RPS3A-201ENST00000274065 BCANQ96GW7 911 aa13.33□□□□□ -0.28
RPS3A-201ENST00000274065 KIF15Q9NS87 1388 aa13.32□□□□□ -0.28
RPS3A-201ENST00000274065 RRP7BPQ9NSQ0 103 aa13.31□□□□□ -0.28
RPS3A-201ENST00000274065 CDK12Q9NYV4 1490 aaPredicted RBP13.3□□□□□ -0.28
RPS3A-201ENST00000274065 NUTM2BA6NNL0 878 aaPredicted RBP13.3□□□□□ -0.28
RPS3A-201ENST00000274065 NUTM2EB1AL46 878 aaPredicted RBP13.3□□□□□ -0.28
RPS3A-201ENST00000274065 NUTM2AQ8IVF1 878 aaPredicted RBP13.3□□□□□ -0.28
RPS3A-201ENST00000274065 KDM5AP29375 1690 aaKnown RBP13.3□□□□□ -0.28
RPS3A-201ENST00000274065 ERBINQ96RT1 1412 aa13.3□□□□□ -0.28
RPS3A-201ENST00000274065 ADGRB3O60242 1522 aa13.29□□□□□ -0.28
RPS3A-201ENST00000274065 AHDC1Q5TGY3 1603 aaPredicted RBP13.28□□□□□ -0.28
RPS3A-201ENST00000274065 CCDC61Q9Y6R9 512 aa13.28□□□□□ -0.28
RPS3A-201ENST00000274065 AFF2P51816 1311 aa13.28□□□□□ -0.28
RPS3A-201ENST00000274065 NOS1P29475 1434 aa13.28□□□□□ -0.28
RPS3A-201ENST00000274065 MYOM3Q5VTT5 1437 aa13.28□□□□□ -0.28
RPS3A-201ENST00000274065 C14orf37Q86TY3 774 aa13.27□□□□□ -0.29
RPS3A-201ENST00000274065 PLCD3Q8N3E9 789 aa13.27□□□□□ -0.29
RPS3A-201ENST00000274065 TSPYL2Q9H2G4 693 aaPredicted RBP13.27□□□□□ -0.29
RPS3A-201ENST00000274065 KANK1Q14678 1352 aa13.27□□□□□ -0.29
RPS3A-201ENST00000274065 SHPRHQ149N8 1683 aa13.27□□□□□ -0.29
RPS3A-201ENST00000274065 RGS12O14924 1447 aa13.26□□□□□ -0.29
RPS3A-201ENST00000274065 ZFYVE9O95405 1425 aa13.26□□□□□ -0.29
RPS3A-201ENST00000274065 KANK4Q5T7N3 995 aaPredicted RBP13.26□□□□□ -0.29
RPS3A-201ENST00000274065 LMTK2Q8IWU2 1503 aa13.26□□□□□ -0.29
RPS3A-201ENST00000274065 PLEKHG1Q9ULL1 1385 aa13.26□□□□□ -0.29
RPS3A-201ENST00000274065 DIP2AQ14689 1571 aa13.25□□□□□ -0.29
RPS3A-201ENST00000274065 ABCC5O15440 1437 aa13.25□□□□□ -0.29
RPS3A-201ENST00000274065 NCOA3Q9Y6Q9 1424 aa13.25□□□□□ -0.29
RPS3A-201ENST00000274065 BRINP3Q76B58 766 aa13.25□□□□□ -0.29
RPS3A-201ENST00000274065 CADPS2Q86UW7 1296 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms