RNA–Protein interactions for RNA: ENST00000265044.6

SSR3-201, Transcript of signal sequence receptor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR3, Length 3,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-201ENST00000265044 TXNDC2Q86VQ3 553 aa12.45□□□□□ -0.42
SSR3-201ENST00000265044 PRAM1Q96QH2 718 aa12.44□□□□□ -0.42
SSR3-201ENST00000265044 MYBBP1AQ9BQG0 1328 aaKnown RBP12.44□□□□□ -0.42
SSR3-201ENST00000265044 C14orf93Q9H972 538 aaKnown RBP12.44□□□□□ -0.42
SSR3-201ENST00000265044 UGGT1Q9NYU2 1555 aa12.44□□□□□ -0.42
SSR3-201ENST00000265044 IQGAP3Q86VI3 1631 aa12.43□□□□□ -0.42
SSR3-201ENST00000265044 UNC13BO14795 1591 aa12.43□□□□□ -0.42
SSR3-201ENST00000265044 PLEKHG5O94827 1062 aa12.42□□□□□ -0.42
SSR3-201ENST00000265044 SLC12A5Q9H2X9 1139 aa12.42□□□□□ -0.42
SSR3-201ENST00000265044 SUPT16HQ9Y5B9 1047 aaKnown RBP12.42□□□□□ -0.42
SSR3-201ENST00000265044 DISP3Q9P2K9 1392 aa12.42□□□□□ -0.42
SSR3-201ENST00000265044 HDGFL2Q7Z4V5 671 aaPredicted RBP12.42□□□□□ -0.42
SSR3-201ENST00000265044 TESK2Q96S53 571 aa12.42□□□□□ -0.42
SSR3-201ENST00000265044 SLC26A8Q96RN1 970 aa12.41□□□□□ -0.42
SSR3-201ENST00000265044 ZMYM3Q14202 1370 aa12.41□□□□□ -0.42
SSR3-201ENST00000265044 NEFMP07197 916 aa12.41□□□□□ -0.42
SSR3-201ENST00000265044 INO80Q9ULG1 1556 aaPredicted RBP12.41□□□□□ -0.42
SSR3-201ENST00000265044 SPATA31E1Q6ZUB1 1445 aa12.41□□□□□ -0.42
SSR3-201ENST00000265044 SCAF11Q99590 1463 aaKnown RBP12.41□□□□□ -0.42
SSR3-201ENST00000265044 CFAP53Q96M91 514 aa12.4□□□□□ -0.42
SSR3-201ENST00000265044 KIDINS220Q9ULH0 1771 aa12.4□□□□□ -0.42
SSR3-201ENST00000265044 PTPRTO14522 1441 aa12.4□□□□□ -0.42
SSR3-201ENST00000265044 TERF2IPQ9NYB0 399 aa12.4□□□□□ -0.42
SSR3-201ENST00000265044 NEUROD2Q15784 382 aa12.4□□□□□ -0.42
SSR3-201ENST00000265044 PRDM15P57071 1507 aaPredicted RBP12.39□□□□□ -0.43
SSR3-201ENST00000265044 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.39□□□□□ -0.432e-6■□□□□ 9
SSR3-201ENST00000265044 THEMISQ8N1K5 641 aaPredicted RBP12.38□□□□□ -0.43
SSR3-201ENST00000265044 MAGI2Q86UL8 1455 aa12.38□□□□□ -0.43
SSR3-201ENST00000265044 WAPLQ7Z5K2 1190 aa12.38□□□□□ -0.43
SSR3-201ENST00000265044 TRPM2O94759 1503 aa12.38□□□□□ -0.43
SSR3-201ENST00000265044 SOX12O15370 315 aa12.38□□□□□ -0.43
SSR3-201ENST00000265044 TET3O43151 1660 aa12.37□□□□□ -0.43
SSR3-201ENST00000265044 DIP2BQ9P265 1576 aa12.37□□□□□ -0.43
SSR3-201ENST00000265044 TNRQ92752 1358 aa12.37□□□□□ -0.43
SSR3-201ENST00000265044 U2SURPO15042 1029 aaKnown RBP12.36□□□□□ -0.43
SSR3-201ENST00000265044 ABCC3O15438 1527 aa12.35□□□□□ -0.43
SSR3-201ENST00000265044 EFCAB6Q5THR3 1501 aa12.35□□□□□ -0.43
SSR3-201ENST00000265044 CGNL1Q0VF96 1302 aa12.35□□□□□ -0.43
SSR3-201ENST00000265044 E9PCH4 1651 aa12.35□□□□□ -0.43
SSR3-201ENST00000265044 GPRASP1Q5JY77 1395 aa12.35□□□□□ -0.43
SSR3-201ENST00000265044 KDM5CP41229 1560 aa12.35□□□□□ -0.43
SSR3-201ENST00000265044 EIF2AK4Q9P2K8 1649 aaKnown RBP12.34□□□□□ -0.43
SSR3-201ENST00000265044 CDK19Q9BWU1 502 aa12.34□□□□□ -0.43
SSR3-201ENST00000265044 ABCA6Q8N139 1617 aa12.34□□□□□ -0.43
SSR3-201ENST00000265044 GLI2P10070 1586 aa12.34□□□□□ -0.43
SSR3-201ENST00000265044 DIP2CQ9Y2E4 1556 aa12.33□□□□□ -0.44
SSR3-201ENST00000265044 DNAJC5Q9H3Z4 198 aa12.33□□□□□ -0.44
SSR3-201ENST00000265044 CCDC146Q8IYE0 955 aa12.33□□□□□ -0.44
SSR3-201ENST00000265044 GGNBP2Q9H3C7 697 aa12.33□□□□□ -0.44
SSR3-201ENST00000265044 NUDCQ9Y266 331 aa12.33□□□□□ -0.44
SSR3-201ENST00000265044 CLTCL1P53675 1640 aa12.32□□□□□ -0.44
SSR3-201ENST00000265044 COL17A1Q9UMD9 1497 aaPredicted RBP12.32□□□□□ -0.44
SSR3-201ENST00000265044 ZBTB7CA1YPR0 619 aa12.32□□□□□ -0.44
SSR3-201ENST00000265044 LMOD2Q6P5Q4 547 aa12.32□□□□□ -0.44
SSR3-201ENST00000265044 CABP1Q9NZU7 370 aa12.32□□□□□ -0.44
SSR3-201ENST00000265044 CEP152O94986 1710 aa12.32□□□□□ -0.44
SSR3-201ENST00000265044 PPP2R1AP30153 589 aa12.31□□□□□ -0.44
SSR3-201ENST00000265044 PNISRQ8TF01 805 aaKnown RBP12.31□□□□□ -0.44
SSR3-201ENST00000265044 RIMS2Q9UQ26 1411 aa12.31□□□□□ -0.44
SSR3-201ENST00000265044 U2AF1L5P0DN76 240 aaPredicted RBP12.31□□□□□ -0.44
SSR3-201ENST00000265044 U2AF1Q01081 240 aaKnown RBP eCLIP12.31□□□□□ -0.442e-12■■■■□ 19.4
SSR3-201ENST00000265044 NGDNQ8NEJ9 315 aaKnown RBP12.31□□□□□ -0.44
SSR3-201ENST00000265044 SPHKAPQ2M3C7 1700 aa12.31□□□□□ -0.44
SSR3-201ENST00000265044 BRD4O60885 1362 aaPredicted RBP12.31□□□□□ -0.44
SSR3-201ENST00000265044 CANXP27824 592 aaKnown RBP12.3□□□□□ -0.44
SSR3-201ENST00000265044 PAK3O75914 559 aaPredicted RBP12.29□□□□□ -0.44
SSR3-201ENST00000265044 MAP3K4Q9Y6R4 1608 aa12.29□□□□□ -0.44
SSR3-201ENST00000265044 RNF17Q9BXT8 1623 aaKnown RBP12.29□□□□□ -0.44
SSR3-201ENST00000265044 KIF1BO60333 1816 aa12.29□□□□□ -0.44
SSR3-201ENST00000265044 ZBED9Q6R2W3 1325 aa12.29□□□□□ -0.44
SSR3-201ENST00000265044 ANKLE2Q86XL3 938 aa12.28□□□□□ -0.44
SSR3-201ENST00000265044 PPRC1Q5VV67 1664 aaKnown RBP12.28□□□□□ -0.44
SSR3-201ENST00000265044 PER1O15534 1290 aaPredicted RBP12.28□□□□□ -0.44
SSR3-201ENST00000265044 ADAMTS8Q9UP79 889 aa12.28□□□□□ -0.44
SSR3-201ENST00000265044 ARHGAP31Q2M1Z3 1444 aa12.27□□□□□ -0.44
SSR3-201ENST00000265044 FRMPD1Q5SYB0 1578 aa12.27□□□□□ -0.45
SSR3-201ENST00000265044 MAPK8IP3Q9UPT6 1336 aa12.27□□□□□ -0.45
SSR3-201ENST00000265044 MTHFSP49914 203 aa12.27□□□□□ -0.45
SSR3-201ENST00000265044 LMTK2Q8IWU2 1503 aa12.26□□□□□ -0.45
SSR3-201ENST00000265044 NSD3Q9BZ95 1437 aa12.26□□□□□ -0.45
SSR3-201ENST00000265044 AMOTL2Q9Y2J4 779 aa12.26□□□□□ -0.45
SSR3-201ENST00000265044 ERVK-7P63135 1459 aa12.26□□□□□ -0.45
SSR3-201ENST00000265044 RBM33Q96EV2 1170 aaKnown RBP12.25□□□□□ -0.45
SSR3-201ENST00000265044 PMFBP1Q8TBY8 1022 aa12.25□□□□□ -0.45
SSR3-201ENST00000265044 AMER1Q5JTC6 1135 aaPredicted RBP12.24□□□□□ -0.45
SSR3-201ENST00000265044 ATAD2Q6PL18 1390 aa12.24□□□□□ -0.45
SSR3-201ENST00000265044 APAF1O14727 1248 aa12.24□□□□□ -0.45
SSR3-201ENST00000265044 RRP7AQ9Y3A4 280 aaKnown RBP12.24□□□□□ -0.45
SSR3-201ENST00000265044 NUDT16Q96DE0 195 aaKnown RBP12.24□□□□□ -0.45
SSR3-201ENST00000265044 COG3Q96JB2 828 aa12.24□□□□□ -0.45
SSR3-201ENST00000265044 CARD14Q9BXL6 1004 aa12.23□□□□□ -0.45
SSR3-201ENST00000265044 MYOM2P54296 1465 aa12.23□□□□□ -0.45
SSR3-201ENST00000265044 LTKP29376 864 aa12.23□□□□□ -0.45
SSR3-201ENST00000265044 CCDC61Q9Y6R9 512 aa12.23□□□□□ -0.45
SSR3-201ENST00000265044 YTHDC2Q9H6S0 1430 aaKnown RBP12.23□□□□□ -0.45
SSR3-201ENST00000265044 DEPDC5O75140 1603 aa12.23□□□□□ -0.45
SSR3-201ENST00000265044 TRPM1Q7Z4N2 1603 aa12.22□□□□□ -0.45
SSR3-201ENST00000265044 WASLO00401 505 aaPredicted RBP12.22□□□□□ -0.45
SSR3-201ENST00000265044 PIK3C2GO75747 1445 aa12.22□□□□□ -0.45
SSR3-201ENST00000265044 VWDEQ8N2E2 1590 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms