RNA–Protein interactions for RNA: ENST00000217109.8

CSTF1-201, Transcript of cleavage stimulation factor subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF1, Length 4,290 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-201ENST00000217109 MYH16Q9H6N6 1097 aa12.49□□□□□ -0.41
CSTF1-201ENST00000217109 CGNL1Q0VF96 1302 aa12.49□□□□□ -0.41
CSTF1-201ENST00000217109 GCC2Q8IWJ2 1684 aa12.49□□□□□ -0.41
CSTF1-201ENST00000217109 VGFO15240 615 aaPredicted RBP12.49□□□□□ -0.41
CSTF1-201ENST00000217109 PER1O15534 1290 aaPredicted RBP12.48□□□□□ -0.41
CSTF1-201ENST00000217109 HDGFL2Q7Z4V5 671 aaPredicted RBP12.48□□□□□ -0.41
CSTF1-201ENST00000217109 BACH2Q9BYV9 841 aa12.48□□□□□ -0.41
CSTF1-201ENST00000217109 PRAG1Q86YV5 1406 aa12.48□□□□□ -0.41
CSTF1-201ENST00000217109 ADGRF5Q8IZF2 1346 aa12.47□□□□□ -0.41
CSTF1-201ENST00000217109 TCP11L2Q8N4U5 519 aa12.47□□□□□ -0.41
CSTF1-201ENST00000217109 GGNBP2Q9H3C7 697 aa12.47□□□□□ -0.41
CSTF1-201ENST00000217109 ITSN2Q9NZM3 1697 aa12.47□□□□□ -0.41
CSTF1-201ENST00000217109 SYCP2Q9BX26 1530 aa12.47□□□□□ -0.41
CSTF1-201ENST00000217109 EVC2Q86UK5 1308 aa12.47□□□□□ -0.41
CSTF1-201ENST00000217109 EIF5BO60841 1220 aaKnown RBP12.47□□□□□ -0.41
CSTF1-201ENST00000217109 FAM135AQ9P2D6 1515 aa12.46□□□□□ -0.41
CSTF1-201ENST00000217109 OSCARQ8IYS5 282 aa12.46□□□□□ -0.41
CSTF1-201ENST00000217109 RWDD1Q9H446 243 aaPredicted RBP12.46□□□□□ -0.41
CSTF1-201ENST00000217109 TERF2IPQ9NYB0 399 aa12.46□□□□□ -0.41
CSTF1-201ENST00000217109 RAPGEF3O95398 923 aa12.46□□□□□ -0.42
CSTF1-201ENST00000217109 CYB5RLQ6IPT4 315 aa12.46□□□□□ -0.42
CSTF1-201ENST00000217109 NUP160Q12769 1436 aa12.46□□□□□ -0.42
CSTF1-201ENST00000217109 ELL2O00472 640 aaPredicted RBP12.45□□□□□ -0.42
CSTF1-201ENST00000217109 RUNDC1Q96C34 613 aa12.45□□□□□ -0.42
CSTF1-201ENST00000217109 CEP170Q5SW79 1584 aa12.44□□□□□ -0.42
CSTF1-201ENST00000217109 NUTM2FA1L443 756 aa12.44□□□□□ -0.42
CSTF1-201ENST00000217109 ADGRL2O95490 1459 aa12.44□□□□□ -0.42
CSTF1-201ENST00000217109 PMFBP1Q8TBY8 1022 aa12.44□□□□□ -0.42
CSTF1-201ENST00000217109 C14orf37Q86TY3 774 aa12.43□□□□□ -0.42
CSTF1-201ENST00000217109 PARD3Q8TEW0 1356 aa12.43□□□□□ -0.42
CSTF1-201ENST00000217109 SLFN5Q08AF3 891 aa12.42□□□□□ -0.42
CSTF1-201ENST00000217109 DUSP27Q5VZP5 1158 aa12.42□□□□□ -0.42
CSTF1-201ENST00000217109 PNNQ9H307 717 aaKnown RBP12.42□□□□□ -0.42
CSTF1-201ENST00000217109 KDM5BQ9UGL1 1544 aa12.42□□□□□ -0.42
CSTF1-201ENST00000217109 UHRF1BP1Q6BDS2 1440 aa12.42□□□□□ -0.42
CSTF1-201ENST00000217109 TRAPPC8Q9Y2L5 1435 aa12.42□□□□□ -0.42
CSTF1-201ENST00000217109 AMER1Q5JTC6 1135 aaPredicted RBP12.42□□□□□ -0.42
CSTF1-201ENST00000217109 ZBTB7CA1YPR0 619 aa12.42□□□□□ -0.42
CSTF1-201ENST00000217109 MFAP1P55081 439 aaKnown RBP12.42□□□□□ -0.42
CSTF1-201ENST00000217109 LRRIQ1Q96JM4 1722 aa12.42□□□□□ -0.42
CSTF1-201ENST00000217109 APBB1O00213 710 aa12.4□□□□□ -0.42
CSTF1-201ENST00000217109 IPO8O15397 1037 aaKnown RBP12.4□□□□□ -0.42
CSTF1-201ENST00000217109 SHANK2Q9UPX8 1470 aa12.4□□□□□ -0.43
CSTF1-201ENST00000217109 ZKSCAN2Q63HK3 967 aa12.4□□□□□ -0.43
CSTF1-201ENST00000217109 TSR2Q969E8 191 aaKnown RBP12.39□□□□□ -0.43
CSTF1-201ENST00000217109 RIPK4P57078 832 aa12.39□□□□□ -0.43
CSTF1-201ENST00000217109 WWC1Q8IX03 1113 aa12.39□□□□□ -0.43
CSTF1-201ENST00000217109 PLCH2O75038 1416 aa12.38□□□□□ -0.43
CSTF1-201ENST00000217109 LRPPRCP42704 1394 aaKnown RBP12.38□□□□□ -0.43
CSTF1-201ENST00000217109 A2MP01023 1474 aa12.38□□□□□ -0.43
CSTF1-201ENST00000217109 ARHGEF12Q9NZN5 1544 aa12.38□□□□□ -0.43
CSTF1-201ENST00000217109 NGEFQ8N5V2 710 aa12.38□□□□□ -0.43
CSTF1-201ENST00000217109 MBD5Q9P267 1494 aa12.37□□□□□ -0.43
CSTF1-201ENST00000217109 DZIP1LQ8IYY4 767 aaKnown RBP12.37□□□□□ -0.43
CSTF1-201ENST00000217109 ABCC10Q5T3U5 1492 aa12.37□□□□□ -0.43
CSTF1-201ENST00000217109 HMOX1P09601 288 aa12.37□□□□□ -0.43
CSTF1-201ENST00000217109 DIAPH1O60610 1272 aaKnown RBP12.36□□□□□ -0.43
CSTF1-201ENST00000217109 PRAM1Q96QH2 718 aa12.36□□□□□ -0.43
CSTF1-201ENST00000217109 GZF1Q9H116 711 aaPredicted RBP12.36□□□□□ -0.43
CSTF1-201ENST00000217109 NSD3Q9BZ95 1437 aa12.36□□□□□ -0.43
CSTF1-201ENST00000217109 SCAF11Q99590 1463 aaKnown RBP12.36□□□□□ -0.43
CSTF1-201ENST00000217109 USP35Q9P2H5 1018 aa12.35□□□□□ -0.43
CSTF1-201ENST00000217109 RNF123Q5XPI4 1314 aa12.35□□□□□ -0.43
CSTF1-201ENST00000217109 ADGRL1O94910 1474 aa12.35□□□□□ -0.43
CSTF1-201ENST00000217109 PLEKHH1Q9ULM0 1364 aa12.35□□□□□ -0.43
CSTF1-201ENST00000217109 NFKBIBQ15653 356 aa12.35□□□□□ -0.43
CSTF1-201ENST00000217109 EXOSC9Q06265 439 aaKnown RBP12.34□□□□□ -0.43
CSTF1-201ENST00000217109 HSP90AB1P08238 724 aaKnown RBP12.34□□□□□ -0.43
CSTF1-201ENST00000217109 FANCAO15360 1455 aa12.34□□□□□ -0.43
CSTF1-201ENST00000217109 PDE3AQ14432 1141 aa12.34□□□□□ -0.43
CSTF1-201ENST00000217109 HSCBQ8IWL3 235 aa12.34□□□□□ -0.43
CSTF1-201ENST00000217109 SPINK5Q9NQ38 1064 aaPredicted RBP12.34□□□□□ -0.43
CSTF1-201ENST00000217109 CARD14Q9BXL6 1004 aa12.34□□□□□ -0.43
CSTF1-201ENST00000217109 DUOX2Q9NRD8 1548 aa12.33□□□□□ -0.44
CSTF1-201ENST00000217109 FAM69CQ0P6D2 419 aa12.32□□□□□ -0.44
CSTF1-201ENST00000217109 NOS1P29475 1434 aa12.32□□□□□ -0.44
CSTF1-201ENST00000217109 CABP1Q9NZU7 370 aa12.32□□□□□ -0.44
CSTF1-201ENST00000217109 GSE1Q14687 1217 aa12.31□□□□□ -0.44
CSTF1-201ENST00000217109 PDZRN3Q9UPQ7 1066 aa12.31□□□□□ -0.44
CSTF1-201ENST00000217109 COL17A1Q9UMD9 1497 aaPredicted RBP12.31□□□□□ -0.44
CSTF1-201ENST00000217109 CHMP4BQ9H444 224 aaKnown RBP12.31□□□□□ -0.44
CSTF1-201ENST00000217109 FOXD4L1Q9NU39 408 aa12.31□□□□□ -0.44
CSTF1-201ENST00000217109 IDI1Q13907 227 aa12.31□□□□□ -0.44
CSTF1-201ENST00000217109 ANKRD45Q5TZF3 282 aa12.31□□□□□ -0.44
CSTF1-201ENST00000217109 KDM5CP41229 1560 aa12.3□□□□□ -0.44
CSTF1-201ENST00000217109 LNPKQ9C0E8 428 aa12.3□□□□□ -0.44
CSTF1-201ENST00000217109 NCLP19338 710 aaKnown RBP12.3□□□□□ -0.44
CSTF1-201ENST00000217109 HDGFP51858 240 aaKnown RBP12.3□□□□□ -0.44
CSTF1-201ENST00000217109 FRAT2O75474 233 aaPredicted RBP12.3□□□□□ -0.44
CSTF1-201ENST00000217109 DDX19BQ9UMR2 479 aa12.3□□□□□ -0.44
CSTF1-201ENST00000217109 ABCA8O94911 1581 aa12.29□□□□□ -0.44
CSTF1-201ENST00000217109 IGHDP01880 384 aa12.29□□□□□ -0.44
CSTF1-201ENST00000217109 ADGBQ8N7X0 1667 aa12.29□□□□□ -0.44
CSTF1-201ENST00000217109 RARSP54136 660 aaKnown RBP12.29□□□□□ -0.44
CSTF1-201ENST00000217109 CALD1Q05682 793 aaKnown RBP12.29□□□□□ -0.44
CSTF1-201ENST00000217109 ANP32BQ92688 251 aaKnown RBP12.29□□□□□ -0.44
CSTF1-201ENST00000217109 BCORL1Q5H9F3 1711 aa12.29□□□□□ -0.44
CSTF1-201ENST00000217109 PRKAR2BP31323 418 aa12.28□□□□□ -0.44
CSTF1-201ENST00000217109 DMRT2Q9Y5R5 561 aa12.28□□□□□ -0.44
CSTF1-201ENST00000217109 GPRASP1Q5JY77 1395 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms