RNA–Protein interactions for RNA: YLR117C

CLF1, Transcript of Member of the NineTeen Complex (NTC), yeast

Gene CLF1, Length 2,064 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CLF1	YLR117C	HSV2	P50079	448 aa	Predicted RBP	4.26	□□□□□ -1.73
CLF1	YLR117C	COX18	P53239	316 aa		4.26	□□□□□ -1.73
CLF1	YLR117C	MTM1	P53320	366 aa		4.26	□□□□□ -1.73
CLF1	YLR117C	YNL092W	P53934	400 aa		4.26	□□□□□ -1.73
CLF1	YLR117C	BUD25	P85052	153 aa		4.26	□□□□□ -1.73
CLF1	YLR117C	YPL062W	Q02781	134 aa		4.26	□□□□□ -1.73
CLF1	YLR117C	GRX8	Q05926	109 aa		4.26	□□□□□ -1.73
CLF1	YLR117C	NUT2	Q06213	157 aa		4.26	□□□□□ -1.73
CLF1	YLR117C	IRC13	Q08630	104 aa		4.26	□□□□□ -1.73
CLF1	YLR117C	YDL007C-A	Q2V2Q0	85 aa		4.26	□□□□□ -1.73
CLF1	YLR117C	YLR361C-A	Q3E795	98 aa		4.26	□□□□□ -1.73
CLF1	YLR117C	YLR149C	Q99296	730 aa		4.26	□□□□□ -1.73
CLF1	YLR117C	UGX2	P32772	223 aa		4.25	□□□□□ -1.73
CLF1	YLR117C	PHD1	P36093	366 aa		4.25	□□□□□ -1.73
CLF1	YLR117C	RPL14A	P36105	138 aa	Known RBP	4.25	□□□□□ -1.73
CLF1	YLR117C	GEX2	P36173	615 aa		4.25	□□□□□ -1.73
CLF1	YLR117C	RPL14B	P38754	138 aa	Known RBP	4.25	□□□□□ -1.73
CLF1	YLR117C	YEA4	P40004	342 aa		4.25	□□□□□ -1.73
CLF1	YLR117C	SHO1	P40073	367 aa		4.25	□□□□□ -1.73
CLF1	YLR117C	MOB1	P40484	314 aa		4.25	□□□□□ -1.73
CLF1	YLR117C	GTS1	P40956	396 aa		4.25	□□□□□ -1.73
CLF1	YLR117C	YJR124C	P47159	448 aa		4.25	□□□□□ -1.73
CLF1	YLR117C	TTI2	P47168	421 aa		4.25	□□□□□ -1.73
CLF1	YLR117C	PDR17	P53844	350 aa		4.25	□□□□□ -1.73
CLF1	YLR117C	PDR16	P53860	351 aa	Known RBP	4.25	□□□□□ -1.73
CLF1	YLR117C	INP1	Q03694	420 aa		4.25	□□□□□ -1.73
CLF1	YLR117C	YPR114W	Q06107	315 aa		4.25	□□□□□ -1.73
CLF1	YLR117C	YOL024W	Q08172	172 aa		4.25	□□□□□ -1.73
CLF1	YLR117C	SLY41	P22215	453 aa		4.25	□□□□□ -1.73
CLF1	YLR117C	GEX1	P25596	615 aa		4.25	□□□□□ -1.73
CLF1	YLR117C	MNS1	P32906	549 aa		4.25	□□□□□ -1.73
CLF1	YLR117C	LDH1	P38139	375 aa		4.25	□□□□□ -1.73
CLF1	YLR117C	YBR292C	P38357	123 aa		4.25	□□□□□ -1.73
CLF1	YLR117C	SSN3	P39073	555 aa		4.25	□□□□□ -1.73
CLF1	YLR117C	PIC2	P40035	300 aa		4.25	□□□□□ -1.73
CLF1	YLR117C	YNL198C	P40166	100 aa		4.25	□□□□□ -1.73
CLF1	YLR117C	PRE5	P40302	234 aa	Known RBP	4.25	□□□□□ -1.73
CLF1	YLR117C	AIR1	P40507	360 aa	Known RBP	4.25	□□□□□ -1.73
CLF1	YLR117C	YPS6	P40583	537 aa		4.25	□□□□□ -1.73
CLF1	YLR117C	ERG25	P53045	309 aa		4.25	□□□□□ -1.73
CLF1	YLR117C	EMC4	P53073	190 aa		4.25	□□□□□ -1.73
CLF1	YLR117C	YGR015C	P53208	328 aa		4.25	□□□□□ -1.73
CLF1	YLR117C	THI74	Q04083	370 aa		4.25	□□□□□ -1.73
CLF1	YLR117C	GTO3	Q04806	366 aa		4.25	□□□□□ -1.73
CLF1	YLR117C	CDD1	Q06549	142 aa		4.25	□□□□□ -1.73
CLF1	YLR117C	SYM1	Q06563	197 aa		4.25	□□□□□ -1.73
CLF1	YLR117C	YPR174C	Q06616	221 aa	Predicted RBP	4.25	□□□□□ -1.73
CLF1	YLR117C	QCR2	P07257	368 aa		4.24	□□□□□ -1.73
CLF1	YLR117C	SEC4	P07560	215 aa	Known RBP	4.24	□□□□□ -1.73
CLF1	YLR117C	CHO1	P08456	276 aa		4.24	□□□□□ -1.73
CLF1	YLR117C	YER190C-B	P0CX94	160 aa		4.24	□□□□□ -1.73
CLF1	YLR117C	YEL077W-A	P0CX95	160 aa		4.24	□□□□□ -1.73
CLF1	YLR117C	YGR296C-B	P0CX96	160 aa		4.24	□□□□□ -1.73
CLF1	YLR117C	YPL283W-B	P0CX97	160 aa		4.24	□□□□□ -1.73
CLF1	YLR117C	YPR204C-A	P0CX98	160 aa		4.24	□□□□□ -1.73
CLF1	YLR117C	ATP10	P18496	279 aa		4.24	□□□□□ -1.73
CLF1	YLR117C	SOR1	P35497	357 aa	Known RBP	4.24	□□□□□ -1.73
CLF1	YLR117C	MCR1	P36060	302 aa	Known RBP	4.24	□□□□□ -1.73
CLF1	YLR117C	DRE2	P36152	348 aa		4.24	□□□□□ -1.73
CLF1	YLR117C	ARC40	P38328	384 aa	Known RBP	4.24	□□□□□ -1.73
CLF1	YLR117C	COX15	P40086	486 aa		4.24	□□□□□ -1.73
CLF1	YLR117C	SEC24	P40482	926 aa	Known RBP	4.24	□□□□□ -1.73
CLF1	YLR117C	BNA1	P47096	177 aa		4.24	□□□□□ -1.73
CLF1	YLR117C	DUO1	P53168	247 aa	Known RBP	4.24	□□□□□ -1.73
CLF1	YLR117C	YNL165W	P53891	406 aa		4.24	□□□□□ -1.73
CLF1	YLR117C	RCR2	Q03446	210 aa	Known RBP	4.24	□□□□□ -1.73
CLF1	YLR117C	TSA2	Q04120	196 aa		4.24	□□□□□ -1.73
CLF1	YLR117C	FSH2	Q05015	223 aa		4.24	□□□□□ -1.73
CLF1	YLR117C	ARR3	Q06598	404 aa		4.24	□□□□□ -1.73
CLF1	YLR117C	SOR2	Q07786	357 aa		4.24	□□□□□ -1.73
CLF1	YLR117C	YOS1	Q3E834	85 aa		4.24	□□□□□ -1.73
CLF1	YLR117C	ODC2	Q99297	307 aa		4.24	□□□□□ -1.73
CLF1	YLR117C	ADH1	P00330	348 aa	Known RBP	4.23	□□□□□ -1.73
CLF1	YLR117C	COX1	P00401	534 aa		4.23	□□□□□ -1.73
CLF1	YLR117C	SAG1	P20840	650 aa		4.23	□□□□□ -1.73
CLF1	YLR117C	TKL1	P23254	680 aa	Known RBP	4.23	□□□□□ -1.73
CLF1	YLR117C	ERG4	P25340	473 aa		4.23	□□□□□ -1.73
CLF1	YLR117C	YCR023C	P25351	611 aa		4.23	□□□□□ -1.73
CLF1	YLR117C	PPA2	P28239	310 aa		4.23	□□□□□ -1.73
CLF1	YLR117C	MKK1	P32490	508 aa		4.23	□□□□□ -1.73
CLF1	YLR117C	TKL2	P33315	681 aa		4.23	□□□□□ -1.73
CLF1	YLR117C	NNK1	P36003	928 aa		4.23	□□□□□ -1.73
CLF1	YLR117C	MCH2	P36032	473 aa		4.23	□□□□□ -1.73
CLF1	YLR117C	ECM33	P38248	429 aa	Known RBP	4.23	□□□□□ -1.73
CLF1	YLR117C	NTC20	P38302	140 aa	Predicted RBP	4.23	□□□□□ -1.73
CLF1	YLR117C	PSD1	P39006	500 aa		4.23	□□□□□ -1.73
CLF1	YLR117C	SEC72	P39742	193 aa	Known RBP	4.23	□□□□□ -1.73
CLF1	YLR117C	YER134C	P40081	178 aa		4.23	□□□□□ -1.73
CLF1	YLR117C	YJL028W	P47062	111 aa		4.23	□□□□□ -1.73
CLF1	YLR117C	BAT2	P47176	376 aa	Known RBP	4.23	□□□□□ -1.73
CLF1	YLR117C	PMT3	P47190	753 aa		4.23	□□□□□ -1.73
CLF1	YLR117C	YNL140C	P53910	189 aa		4.23	□□□□□ -1.73
CLF1	YLR117C	APS2	Q00381	147 aa		4.23	□□□□□ -1.73
CLF1	YLR117C	SPG3	Q04398	127 aa	Predicted RBP	4.23	□□□□□ -1.73
CLF1	YLR117C	SNO4	Q04902	237 aa		4.23	□□□□□ -1.73
CLF1	YLR117C	YOL073C	Q08232	322 aa		4.23	□□□□□ -1.73
CLF1	YLR117C	HSP33	Q08914	237 aa	Known RBP	4.23	□□□□□ -1.73
CLF1	YLR117C	HSP32	Q08992	237 aa		4.23	□□□□□ -1.73
CLF1	YLR117C	YPL162C	Q12042	273 aa		4.23	□□□□□ -1.73
CLF1	YLR117C	GEP5	Q12393	293 aa		4.23	□□□□□ -1.73

Retrieved 100 of 5,963 RNA–protein pairs in 22.9 ms