RNA–Protein interactions for RNA: ENST00000640414.1

MECP2-226, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 5 BASIC

Gene MECP2, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-226ENST00000640414 WDR27A2RRH5 827 aa12.68□□□□□ -0.38
MECP2-226ENST00000640414 C4orf47A7E2U8 309 aa12.68□□□□□ -0.38
MECP2-226ENST00000640414 ZNF263O14978 683 aa12.68□□□□□ -0.38
MECP2-226ENST00000640414 RPP40O75818 363 aaKnown RBP12.68□□□□□ -0.38
MECP2-226ENST00000640414 MLLT6P55198 1093 aaPredicted RBP12.68□□□□□ -0.38
MECP2-226ENST00000640414 PSMC5P62195 406 aa12.68□□□□□ -0.38
MECP2-226ENST00000640414 KRT85P78386 507 aa12.68□□□□□ -0.38
MECP2-226ENST00000640414 PCBP1Q15365 356 aaKnown RBP eCLIP12.68□□□□□ -0.38
MECP2-226ENST00000640414 SF3A1Q15459 793 aaKnown RBP12.68□□□□□ -0.38
MECP2-226ENST00000640414 TTC38Q5R3I4 469 aa12.68□□□□□ -0.38
MECP2-226ENST00000640414 SH3PXD2AQ5TCZ1 1133 aa12.68□□□□□ -0.38
MECP2-226ENST00000640414 CDR2LQ86X02 465 aaPredicted RBP12.68□□□□□ -0.38
MECP2-226ENST00000640414 DEPDC1BQ8WUY9 529 aa12.68□□□□□ -0.38
MECP2-226ENST00000640414 SMARCD2Q92925 531 aa12.68□□□□□ -0.38
MECP2-226ENST00000640414 ZSWIM3Q96MP5 696 aa12.68□□□□□ -0.38
MECP2-226ENST00000640414 GBP4Q96PP9 640 aa12.68□□□□□ -0.38
MECP2-226ENST00000640414 EDEM2Q9BV94 578 aa12.68□□□□□ -0.38
MECP2-226ENST00000640414 VPS45Q9NRW7 570 aa12.68□□□□□ -0.38
MECP2-226ENST00000640414 MTRRQ9UBK8 725 aa12.68□□□□□ -0.38
MECP2-226ENST00000640414 PARP2Q9UGN5 583 aa12.68□□□□□ -0.38
MECP2-226ENST00000640414 NOL7Q9UMY1 257 aaKnown RBP12.68□□□□□ -0.38
MECP2-226ENST00000640414 PCDHGA5Q9Y5G8 931 aa12.68□□□□□ -0.38
MECP2-226ENST00000640414 CDY1Q9Y6F8 540 aa12.68□□□□□ -0.38
MECP2-226ENST00000640414 ZMYM2Q9UBW7 1377 aa12.68□□□□□ -0.38
MECP2-226ENST00000640414 INO80B-WBP1J3KQ70 363 aa12.67□□□□□ -0.38
MECP2-226ENST00000640414 ARF4P18085 180 aaPredicted RBP12.67□□□□□ -0.38
MECP2-226ENST00000640414 MCM4P33991 863 aa12.67□□□□□ -0.38
MECP2-226ENST00000640414 CCR2P41597 374 aa12.67□□□□□ -0.38
MECP2-226ENST00000640414 SOX9P48436 509 aa12.67□□□□□ -0.38
MECP2-226ENST00000640414 PXNP49023 591 aaPredicted RBP12.67□□□□□ -0.38
MECP2-226ENST00000640414 NASPP49321 788 aaPredicted RBP12.67□□□□□ -0.38
MECP2-226ENST00000640414 USP11P51784 963 aa12.67□□□□□ -0.38
MECP2-226ENST00000640414 PTENP60484 403 aa12.67□□□□□ -0.38
MECP2-226ENST00000640414 ELAVL2Q12926 359 aaKnown RBP12.67□□□□□ -0.38
MECP2-226ENST00000640414 PTPAQ15257 358 aa12.67□□□□□ -0.38
MECP2-226ENST00000640414 AMHR2Q16671 573 aa12.67□□□□□ -0.38
MECP2-226ENST00000640414 SOWAHCQ53LP3 525 aaPredicted RBP12.67□□□□□ -0.38
MECP2-226ENST00000640414 DGKKQ5KSL6 1271 aa12.67□□□□□ -0.38
MECP2-226ENST00000640414 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.67□□□□□ -0.38
MECP2-226ENST00000640414 NEK8Q86SG6 692 aa12.67□□□□□ -0.38
MECP2-226ENST00000640414 LEO1Q8WVC0 666 aaPredicted RBP12.67□□□□□ -0.38
MECP2-226ENST00000640414 CEP170P1Q96L14 293 aa12.67□□□□□ -0.38
MECP2-226ENST00000640414 CORO1BQ9BR76 489 aa12.67□□□□□ -0.38
MECP2-226ENST00000640414 SCAND2PQ9GZW5 306 aaPredicted RBP12.67□□□□□ -0.38
MECP2-226ENST00000640414 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.67□□□□□ -0.38
MECP2-226ENST00000640414 SPAG17Q6Q759 2223 aa12.67□□□□□ -0.38
MECP2-226ENST00000640414 ARHGEF37A1IGU5 675 aa12.66□□□□□ -0.38
MECP2-226ENST00000640414 SLC38A8A6NNN8 435 aa12.66□□□□□ -0.38
MECP2-226ENST00000640414 ASAP2O43150 1006 aa12.66□□□□□ -0.38
MECP2-226ENST00000640414 B4GALT5O43286 388 aa12.66□□□□□ -0.38
MECP2-226ENST00000640414 PRPF40AO75400 957 aaKnown RBP12.66□□□□□ -0.38
MECP2-226ENST00000640414 MICAL2O94851 1124 aa12.66□□□□□ -0.38
MECP2-226ENST00000640414 NPTXRO95502 500 aa12.66□□□□□ -0.38
MECP2-226ENST00000640414 LRG1P02750 347 aa12.66□□□□□ -0.38
MECP2-226ENST00000640414 CCDC192P0DO97 292 aa12.66□□□□□ -0.38
MECP2-226ENST00000640414 FGFR3P22607 806 aa12.66□□□□□ -0.38
MECP2-226ENST00000640414 IGFBP6P24592 240 aaPredicted RBP12.66□□□□□ -0.38
MECP2-226ENST00000640414 RFC5P40937 340 aa12.66□□□□□ -0.38
MECP2-226ENST00000640414 MBTD1Q05BQ5 628 aa12.66□□□□□ -0.38
MECP2-226ENST00000640414 SPIRE1Q08AE8 756 aa12.66□□□□□ -0.38
MECP2-226ENST00000640414 NCBP1Q09161 790 aaKnown RBP12.66□□□□□ -0.38
MECP2-226ENST00000640414 EMC2Q15006 297 aa12.66□□□□□ -0.38
MECP2-226ENST00000640414 SLC39A14Q15043 492 aa12.66□□□□□ -0.38
MECP2-226ENST00000640414 Q4G0T1 1027 aa12.66□□□□□ -0.38
MECP2-226ENST00000640414 C1orf228Q6PIY5 440 aa12.66□□□□□ -0.38
MECP2-226ENST00000640414 TXNDC11Q6PKC3 985 aa12.66□□□□□ -0.38
MECP2-226ENST00000640414 MFSD6LQ8IWD5 586 aa12.66□□□□□ -0.38
MECP2-226ENST00000640414 EXOC8Q8IYI6 725 aa12.66□□□□□ -0.38
MECP2-226ENST00000640414 C4orf32Q8N8J7 132 aa12.66□□□□□ -0.38
MECP2-226ENST00000640414 LINC00301Q8NCQ3 95 aa12.66□□□□□ -0.38
MECP2-226ENST00000640414 CSGALNACT1Q8TDX6 532 aa12.66□□□□□ -0.38
MECP2-226ENST00000640414 MSANTD3Q96H12 275 aa12.66□□□□□ -0.38
MECP2-226ENST00000640414 CXCL16Q9H2A7 254 aa12.66□□□□□ -0.38
MECP2-226ENST00000640414 WRAP73Q9P2S5 460 aaPredicted RBP12.66□□□□□ -0.38
MECP2-226ENST00000640414 AKAP13Q12802 2813 aa12.66□□□□□ -0.38
MECP2-226ENST00000640414 GCN1Q92616 2671 aaKnown RBP12.66□□□□□ -0.38
MECP2-226ENST00000640414 WDFY3Q8IZQ1 3526 aa12.66□□□□□ -0.38
MECP2-226ENST00000640414 CYP3A7-CYP3A51PA0A087WV96 503 aa12.65□□□□□ -0.38
MECP2-226ENST00000640414 EML1O00423 815 aa12.65□□□□□ -0.38
MECP2-226ENST00000640414 PTGESO14684 152 aa12.65□□□□□ -0.38
MECP2-226ENST00000640414 EXTL3O43909 919 aa12.65□□□□□ -0.38
MECP2-226ENST00000640414 CCNT1O60563 726 aaKnown RBP12.65□□□□□ -0.38
MECP2-226ENST00000640414 MOSPD3O75425 235 aa12.65□□□□□ -0.38
MECP2-226ENST00000640414 YEATS4O95619 227 aa12.65□□□□□ -0.38
MECP2-226ENST00000640414 CYP3A7P24462 503 aa12.65□□□□□ -0.38
MECP2-226ENST00000640414 MCM7P33993 719 aa12.65□□□□□ -0.38
MECP2-226ENST00000640414 KPNA1P52294 538 aaPredicted RBP12.65□□□□□ -0.38
MECP2-226ENST00000640414 STK38Q15208 465 aa12.65□□□□□ -0.38
MECP2-226ENST00000640414 NAB2Q15742 525 aa12.65□□□□□ -0.38
MECP2-226ENST00000640414 SLC27A1Q6PCB7 646 aa12.65□□□□□ -0.38
MECP2-226ENST00000640414 PDZD4Q76G19 769 aaPredicted RBP12.65□□□□□ -0.38
MECP2-226ENST00000640414 TCP11Q8WWU5 503 aa12.65□□□□□ -0.38
MECP2-226ENST00000640414 RSPRY1Q96DX4 576 aa12.65□□□□□ -0.38
MECP2-226ENST00000640414 KIF12Q96FN5 646 aa12.65□□□□□ -0.38
MECP2-226ENST00000640414 ZC3H10Q96K80 434 aaKnown RBP12.65□□□□□ -0.38
MECP2-226ENST00000640414 SPATA32Q96LK8 384 aa12.65□□□□□ -0.38
MECP2-226ENST00000640414 C8orf33Q9H7E9 229 aaPredicted RBP12.65□□□□□ -0.38
MECP2-226ENST00000640414 PPME1Q9Y570 386 aa12.65□□□□□ -0.38
MECP2-226ENST00000640414 BACE2Q9Y5Z0 518 aa12.65□□□□□ -0.38
MECP2-226ENST00000640414 EML5Q05BV3 1969 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms