RNA–Protein interactions for RNA: ENST00000638680.1

SCARB2-213, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 5,817 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-213ENST00000638680 OSBPL8Q9BZF1 889 aa19.42■□□□□ 0.7
SCARB2-213ENST00000638680 SERPINB3P29508 390 aa19.42■□□□□ 0.7
SCARB2-213ENST00000638680 WDR72Q3MJ13 1102 aa19.42■□□□□ 0.7
SCARB2-213ENST00000638680 RTKN2Q8IZC4 609 aa19.42■□□□□ 0.7
SCARB2-213ENST00000638680 TAGAPQ8N103 731 aa19.42■□□□□ 0.7
SCARB2-213ENST00000638680 GLI2P10070 1586 aa19.41■□□□□ 0.7
SCARB2-213ENST00000638680 LRRIQ3A6PVS8 624 aaPredicted RBP19.41■□□□□ 0.7
SCARB2-213ENST00000638680 COILP38432 576 aaPredicted RBP19.41■□□□□ 0.7
SCARB2-213ENST00000638680 MTM1Q13496 603 aa19.41■□□□□ 0.7
SCARB2-213ENST00000638680 KLHDC7AQ5VTJ3 777 aa19.41■□□□□ 0.7
SCARB2-213ENST00000638680 GCNAQ96QF7 691 aa19.41■□□□□ 0.7
SCARB2-213ENST00000638680 AIPL1Q9NZN9 384 aa19.41■□□□□ 0.7
SCARB2-213ENST00000638680 ZSCAN9O15535 394 aaPredicted RBP19.41■□□□□ 0.7
SCARB2-213ENST00000638680 C21orf2O43822 256 aa19.41■□□□□ 0.7
SCARB2-213ENST00000638680 NFKBIAP25963 317 aa19.41■□□□□ 0.7
SCARB2-213ENST00000638680 MRPS15P82914 257 aaKnown RBP19.41■□□□□ 0.7
SCARB2-213ENST00000638680 COBLL1Q53SF7 1204 aa19.41■□□□□ 0.7
SCARB2-213ENST00000638680 TTC39BQ5VTQ0 682 aaPredicted RBP19.41■□□□□ 0.7
SCARB2-213ENST00000638680 CLTCL1P53675 1640 aa19.41■□□□□ 0.7
SCARB2-213ENST00000638680 ABCC3O15438 1527 aa19.41■□□□□ 0.7
SCARB2-213ENST00000638680 CCDC78A2IDD5 438 aa19.41■□□□□ 0.7
SCARB2-213ENST00000638680 SYNDIG1LA6NDD5 238 aa19.41■□□□□ 0.7
SCARB2-213ENST00000638680 DEAF1O75398 565 aaPredicted RBP19.41■□□□□ 0.7
SCARB2-213ENST00000638680 H2AFXP16104 143 aaPredicted RBP19.41■□□□□ 0.7
SCARB2-213ENST00000638680 TRADDQ15628 312 aa19.41■□□□□ 0.7
SCARB2-213ENST00000638680 GPR162Q16538 588 aa19.41■□□□□ 0.7
SCARB2-213ENST00000638680 GJB7Q6PEY0 223 aa19.41■□□□□ 0.7
SCARB2-213ENST00000638680 LDHDQ86WU2 507 aa19.41■□□□□ 0.7
SCARB2-213ENST00000638680 RBBP8NLQ8NC74 664 aaPredicted RBP19.41■□□□□ 0.7
SCARB2-213ENST00000638680 TPI1P60174 286 aa19.41■□□□□ 0.7
SCARB2-213ENST00000638680 PIGHQ14442 188 aaPredicted RBP19.41■□□□□ 0.7
SCARB2-213ENST00000638680 CMTM5Q96DZ9 223 aa19.41■□□□□ 0.7
SCARB2-213ENST00000638680 TASP1Q9H6P5 420 aa19.41■□□□□ 0.7
SCARB2-213ENST00000638680 QTRT2Q9H974 415 aaKnown RBP19.41■□□□□ 0.7
SCARB2-213ENST00000638680 CHORDC1Q9UHD1 332 aaPredicted RBP19.41■□□□□ 0.7
SCARB2-213ENST00000638680 MYO3BQ8WXR4 1341 aa19.4■□□□□ 0.7
SCARB2-213ENST00000638680 NBPF26B4DH59 902 aa19.4■□□□□ 0.7
SCARB2-213ENST00000638680 SRP72O76094 671 aaKnown RBP19.4■□□□□ 0.7
SCARB2-213ENST00000638680 PDGFRAP16234 1089 aa19.4■□□□□ 0.7
SCARB2-213ENST00000638680 VHLP40337 213 aa19.4■□□□□ 0.7
SCARB2-213ENST00000638680 RIBC1Q8N443 379 aaPredicted RBP19.4■□□□□ 0.7
SCARB2-213ENST00000638680 NBPF15Q8N660 670 aa19.4■□□□□ 0.7
SCARB2-213ENST00000638680 SYN2Q92777 582 aaPredicted RBP19.4■□□□□ 0.7
SCARB2-213ENST00000638680 ELMO2Q96JJ3 720 aa19.4■□□□□ 0.7
SCARB2-213ENST00000638680 TBC1D23Q9NUY8 699 aa19.4■□□□□ 0.7
SCARB2-213ENST00000638680 ZNF212Q9UDV6 495 aa19.4■□□□□ 0.7
SCARB2-213ENST00000638680 PNPLA6Q8IY17 1366 aa19.4■□□□□ 0.7
SCARB2-213ENST00000638680 RGS7P49802 495 aa19.4■□□□□ 0.7
SCARB2-213ENST00000638680 USP10Q14694 798 aaKnown RBP19.4■□□□□ 0.7
SCARB2-213ENST00000638680 LZICQ8WZA0 190 aa19.4■□□□□ 0.7
SCARB2-213ENST00000638680 FOXP3Q9BZS1 431 aa19.4■□□□□ 0.7
SCARB2-213ENST00000638680 PLEKHA5Q9HAU0 1116 aa19.4■□□□□ 0.7
SCARB2-213ENST00000638680 CDYLQ9Y232 598 aa19.4■□□□□ 0.7
SCARB2-213ENST00000638680 MYL2P10916 166 aa19.4■□□□□ 0.7
SCARB2-213ENST00000638680 ABCE1P61221 599 aaKnown RBP19.4■□□□□ 0.7
SCARB2-213ENST00000638680 BTKQ06187 659 aa19.4■□□□□ 0.7
SCARB2-213ENST00000638680 DNAJC3Q13217 504 aa19.4■□□□□ 0.7
SCARB2-213ENST00000638680 ELOA2Q8IYF1 753 aaPredicted RBP19.4■□□□□ 0.7
SCARB2-213ENST00000638680 SPATA33Q96N06 139 aa19.4■□□□□ 0.7
SCARB2-213ENST00000638680 MYO1DO94832 1006 aa19.4■□□□□ 0.7
SCARB2-213ENST00000638680 COL23A1Q86Y22 540 aaPredicted RBP19.4■□□□□ 0.7
SCARB2-213ENST00000638680 WRNIP1Q96S55 665 aa19.4■□□□□ 0.7
SCARB2-213ENST00000638680 DGKIO75912 1065 aa19.39■□□□□ 0.7
SCARB2-213ENST00000638680 CHI3L2Q15782 390 aa19.39■□□□□ 0.7
SCARB2-213ENST00000638680 CLEC4FQ8N1N0 589 aa19.39■□□□□ 0.7
SCARB2-213ENST00000638680 MYCBPAPQ8TBZ2 947 aa19.39■□□□□ 0.7
SCARB2-213ENST00000638680 ERGIC2Q96RQ1 377 aa19.39■□□□□ 0.7
SCARB2-213ENST00000638680 A2ML1A8K2U0 1454 aa19.39■□□□□ 0.69
SCARB2-213ENST00000638680 SNRPAP09012 282 aaKnown RBP19.39■□□□□ 0.69
SCARB2-213ENST00000638680 MMP10P09238 476 aa19.39■□□□□ 0.69
SCARB2-213ENST00000638680 CENPCQ03188 943 aa19.39■□□□□ 0.69
SCARB2-213ENST00000638680 WDR93Q6P2C0 686 aa19.39■□□□□ 0.69
SCARB2-213ENST00000638680 RNF149Q8NC42 400 aa19.39■□□□□ 0.69
SCARB2-213ENST00000638680 TPCN2Q8NHX9 752 aa19.39■□□□□ 0.69
SCARB2-213ENST00000638680 TIPINQ9BVW5 301 aa19.39■□□□□ 0.69
SCARB2-213ENST00000638680 PLEKHG2Q9H7P9 1386 aa19.39■□□□□ 0.69
SCARB2-213ENST00000638680 XPO1O14980 1071 aaKnown RBP19.39■□□□□ 0.69
SCARB2-213ENST00000638680 PRKCBP05771 671 aa19.39■□□□□ 0.69
SCARB2-213ENST00000638680 SOX11P35716 441 aa19.39■□□□□ 0.69
SCARB2-213ENST00000638680 RECQLP46063 649 aaPredicted RBP19.39■□□□□ 0.69
SCARB2-213ENST00000638680 RNF219Q5W0B1 726 aaPredicted RBP19.39■□□□□ 0.69
SCARB2-213ENST00000638680 EPB41L4AQ9HCS5 686 aaPredicted RBP19.39■□□□□ 0.69
SCARB2-213ENST00000638680 MTMR4Q9NYA4 1195 aa19.39■□□□□ 0.69
SCARB2-213ENST00000638680 ZNF543Q08ER8 600 aa19.39■□□□□ 0.69
SCARB2-213ENST00000638680 DMC1Q14565 340 aa19.39■□□□□ 0.69
SCARB2-213ENST00000638680 E2F7Q96AV8 911 aa19.39■□□□□ 0.69
SCARB2-213ENST00000638680 RMDN1Q96DB5 314 aa19.39■□□□□ 0.69
SCARB2-213ENST00000638680 SPON2Q9BUD6 331 aa19.39■□□□□ 0.69
SCARB2-213ENST00000638680 PODNQ7Z5L7 613 aa19.38■□□□□ 0.69
SCARB2-213ENST00000638680 EPS8L3Q8TE67 593 aaKnown RBP19.38■□□□□ 0.69
SCARB2-213ENST00000638680 C16orf96A6NNT2 1141 aa19.38■□□□□ 0.69
SCARB2-213ENST00000638680 CCDC159P0C7I6 412 aa19.38■□□□□ 0.69
SCARB2-213ENST00000638680 NCOA4Q13772 614 aa19.38■□□□□ 0.69
SCARB2-213ENST00000638680 SERPINB12Q96P63 405 aa19.38■□□□□ 0.69
SCARB2-213ENST00000638680 CCT7Q99832 543 aa19.38■□□□□ 0.69
SCARB2-213ENST00000638680 C3orf70A6NLC5 250 aaPredicted RBP19.38■□□□□ 0.69
SCARB2-213ENST00000638680 TTLL4Q14679 1199 aa19.38■□□□□ 0.69
SCARB2-213ENST00000638680 PLD3Q8IV08 490 aa19.38■□□□□ 0.69
SCARB2-213ENST00000638680 WDR35Q9P2L0 1181 aa19.38■□□□□ 0.69
SCARB2-213ENST00000638680 HPS5Q9UPZ3 1129 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms