RNA–Protein interactions for RNA: ENST00000637616.1

CACNA1A-243, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,081 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-243ENST00000637616 SYT15Q9BQS2 421 aa21.43■■□□□ 1.02
CACNA1A-243ENST00000637616 FDX1P10109 184 aa21.43■■□□□ 1.02
CACNA1A-243ENST00000637616 PARP6Q2NL67 630 aa21.43■■□□□ 1.02
CACNA1A-243ENST00000637616 LMBRD2Q68DH5 695 aaPredicted RBP21.43■■□□□ 1.02
CACNA1A-243ENST00000637616 POMGNT1Q8WZA1 660 aa21.43■■□□□ 1.02
CACNA1A-243ENST00000637616 TMEM206Q9H813 350 aa21.43■■□□□ 1.02
CACNA1A-243ENST00000637616 PIDD1Q9HB75 910 aa21.43■■□□□ 1.02
CACNA1A-243ENST00000637616 METTL5Q9NRN9 209 aaKnown RBP21.43■■□□□ 1.02
CACNA1A-243ENST00000637616 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.43■■□□□ 1.02
CACNA1A-243ENST00000637616 NEU2Q9Y3R4 380 aa21.43■■□□□ 1.02
CACNA1A-243ENST00000637616 C10orf71Q711Q0 1435 aa21.42■■□□□ 1.02
CACNA1A-243ENST00000637616 POLR2MP0CAP2 368 aa21.42■■□□□ 1.02
CACNA1A-243ENST00000637616 ADSSP30520 456 aa21.42■■□□□ 1.02
CACNA1A-243ENST00000637616 BIRC2Q13490 618 aa21.42■■□□□ 1.02
CACNA1A-243ENST00000637616 SPARCL1Q14515 664 aa21.42■■□□□ 1.02
CACNA1A-243ENST00000637616 CLEC16AQ2KHT3 1053 aa21.42■■□□□ 1.02
CACNA1A-243ENST00000637616 APBB1IPQ7Z5R6 666 aaPredicted RBP21.42■■□□□ 1.02
CACNA1A-243ENST00000637616 AGGF1Q8N302 714 aaeCLIP21.42■■□□□ 1.02
CACNA1A-243ENST00000637616 DENND1AQ8TEH3 1009 aa21.42■■□□□ 1.02
CACNA1A-243ENST00000637616 HAUS1Q96CS2 278 aa21.42■■□□□ 1.02
CACNA1A-243ENST00000637616 WFS1O76024 890 aa21.42■■□□□ 1.02
CACNA1A-243ENST00000637616 PLS3P13797 630 aa21.42■■□□□ 1.02
CACNA1A-243ENST00000637616 NOP14P78316 857 aaKnown RBP21.42■■□□□ 1.02
CACNA1A-243ENST00000637616 KHDC1Q4VXA5 237 aaKnown RBP21.42■■□□□ 1.02
CACNA1A-243ENST00000637616 PLEKHG4Q58EX7 1191 aa21.42■■□□□ 1.02
CACNA1A-243ENST00000637616 TMEM179Q6ZVK1 233 aa21.42■■□□□ 1.02
CACNA1A-243ENST00000637616 TEKT3Q9BXF9 490 aa21.42■■□□□ 1.02
CACNA1A-243ENST00000637616 BRD2P25440 801 aaKnown RBP21.42■■□□□ 1.02
CACNA1A-243ENST00000637616 INHBEP58166 350 aa21.42■■□□□ 1.02
CACNA1A-243ENST00000637616 OTOAQ7RTW8 1153 aa21.42■■□□□ 1.02
CACNA1A-243ENST00000637616 KLF6Q99612 283 aaPredicted RBP21.42■■□□□ 1.02
CACNA1A-243ENST00000637616 GOLGA8RI6L899 631 aa21.41■■□□□ 1.02
CACNA1A-243ENST00000637616 P4HA2O15460 535 aa21.41■■□□□ 1.02
CACNA1A-243ENST00000637616 EDF1O60869 148 aaKnown RBP21.41■■□□□ 1.02
CACNA1A-243ENST00000637616 ERFP50548 548 aa21.41■■□□□ 1.02
CACNA1A-243ENST00000637616 SARNPP82979 210 aaKnown RBP21.41■■□□□ 1.02
CACNA1A-243ENST00000637616 ANKMY2Q8IV38 441 aa21.41■■□□□ 1.02
CACNA1A-243ENST00000637616 MCOLN2Q8IZK6 566 aa21.41■■□□□ 1.02
CACNA1A-243ENST00000637616 CCDC89Q8N998 374 aa21.41■■□□□ 1.02
CACNA1A-243ENST00000637616 CERKQ8TCT0 537 aa21.41■■□□□ 1.02
CACNA1A-243ENST00000637616 GMCL1Q96IK5 515 aa21.41■■□□□ 1.02
CACNA1A-243ENST00000637616 ZHX2Q9Y6X8 837 aa21.41■■□□□ 1.02
CACNA1A-243ENST00000637616 EP400Q96L91 3159 aa21.41■■□□□ 1.02
CACNA1A-243ENST00000637616 FOCADQ5VW36 1801 aa21.41■■□□□ 1.02
CACNA1A-243ENST00000637616 PPEF1O14829 653 aaPredicted RBP21.41■■□□□ 1.02
CACNA1A-243ENST00000637616 CAV1Q03135 178 aa21.41■■□□□ 1.02
CACNA1A-243ENST00000637616 KRT39Q6A163 491 aa21.41■■□□□ 1.02
CACNA1A-243ENST00000637616 MIER3Q7Z3K6 550 aa21.41■■□□□ 1.02
CACNA1A-243ENST00000637616 ACER1Q8TDN7 264 aa21.41■■□□□ 1.02
CACNA1A-243ENST00000637616 UCMAQ8WVF2 138 aa21.41■■□□□ 1.02
CACNA1A-243ENST00000637616 C10orf82Q8WW14 230 aa21.41■■□□□ 1.02
CACNA1A-243ENST00000637616 ACSF2Q96CM8 615 aaPredicted RBP21.41■■□□□ 1.02
CACNA1A-243ENST00000637616 NT5C1BQ96P26 610 aa21.41■■□□□ 1.02
CACNA1A-243ENST00000637616 SMC6Q96SB8 1091 aa21.41■■□□□ 1.02
CACNA1A-243ENST00000637616 MAK16Q9BXY0 300 aaKnown RBP21.41■■□□□ 1.02
CACNA1A-243ENST00000637616 OSBPL8Q9BZF1 889 aa21.41■■□□□ 1.02
CACNA1A-243ENST00000637616 PIK3CDO00329 1044 aa21.4■■□□□ 1.02
CACNA1A-243ENST00000637616 TCF4P15884 667 aa21.4■■□□□ 1.02
CACNA1A-243ENST00000637616 ALDH3A1P30838 453 aa21.4■■□□□ 1.02
CACNA1A-243ENST00000637616 SOX10P56693 466 aa21.4■■□□□ 1.02
CACNA1A-243ENST00000637616 MXRA7P84157 204 aa21.4■■□□□ 1.02
CACNA1A-243ENST00000637616 KLF1Q13351 362 aaPredicted RBP21.4■■□□□ 1.02
CACNA1A-243ENST00000637616 FAM182AQ5T1J6 154 aa21.4■■□□□ 1.02
CACNA1A-243ENST00000637616 HHATQ5VTY9 493 aa21.4■■□□□ 1.02
CACNA1A-243ENST00000637616 MIPEPQ99797 713 aa21.4■■□□□ 1.02
CACNA1A-243ENST00000637616 C11orf70Q9BRQ4 267 aa21.4■■□□□ 1.02
CACNA1A-243ENST00000637616 ZFP69BQ9UJL9 534 aa21.4■■□□□ 1.02
CACNA1A-243ENST00000637616 SBDSQ9Y3A5 250 aaKnown RBP eCLIP21.4■■□□□ 1.02
CACNA1A-243ENST00000637616 PSMC4P43686 418 aa21.4■■□□□ 1.02
CACNA1A-243ENST00000637616 TMEM154Q6P9G4 183 aa21.4■■□□□ 1.02
CACNA1A-243ENST00000637616 LVRNQ6Q4G3 990 aa21.4■■□□□ 1.02
CACNA1A-243ENST00000637616 DSTYKQ6XUX3 929 aa21.4■■□□□ 1.02
CACNA1A-243ENST00000637616 CCDC125Q86Z20 511 aa21.4■■□□□ 1.02
CACNA1A-243ENST00000637616 ZBED8Q8IZ13 594 aa21.4■■□□□ 1.02
CACNA1A-243ENST00000637616 WDR11Q9BZH6 1224 aa21.4■■□□□ 1.02
CACNA1A-243ENST00000637616 RAB20Q9NX57 234 aa21.4■■□□□ 1.02
CACNA1A-243ENST00000637616 DNPEPQ9ULA0 475 aa21.4■■□□□ 1.02
CACNA1A-243ENST00000637616 SMIM24O75264 130 aa21.4■■□□□ 1.02
CACNA1A-243ENST00000637616 AP1G2O75843 785 aa21.4■■□□□ 1.02
CACNA1A-243ENST00000637616 PECAM1P16284 738 aaPredicted RBP21.4■■□□□ 1.02
CACNA1A-243ENST00000637616 EFTUD2Q15029 972 aaKnown RBP eCLIP21.4■■□□□ 1.02
CACNA1A-243ENST00000637616 MAPK6Q16659 721 aa21.4■■□□□ 1.02
CACNA1A-243ENST00000637616 HHIPL2Q6UWX4 724 aa21.4■■□□□ 1.02
CACNA1A-243ENST00000637616 SYDE1Q6ZW31 735 aaPredicted RBP21.4■■□□□ 1.02
CACNA1A-243ENST00000637616 NLRP9Q7RTR0 991 aa21.4■■□□□ 1.02
CACNA1A-243ENST00000637616 ASAP3Q8TDY4 903 aa21.4■■□□□ 1.02
CACNA1A-243ENST00000637616 KIFAP3Q92845 792 aa21.4■■□□□ 1.02
CACNA1A-243ENST00000637616 USP20Q9Y2K6 914 aa21.4■■□□□ 1.02
CACNA1A-243ENST00000637616 NRAPQ86VF7 1730 aa21.39■■□□□ 1.02
CACNA1A-243ENST00000637616 ATF7P17544 494 aaPredicted RBP21.39■■□□□ 1.01
CACNA1A-243ENST00000637616 ITGB5P18084 799 aa21.39■■□□□ 1.01
CACNA1A-243ENST00000637616 STAT2P52630 851 aa21.39■■□□□ 1.01
CACNA1A-243ENST00000637616 MUM1Q2TAK8 710 aa21.39■■□□□ 1.01
CACNA1A-243ENST00000637616 RFX8Q6ZV50 586 aa21.39■■□□□ 1.01
CACNA1A-243ENST00000637616 GMCL1P1Q8NEA9 526 aa21.39■■□□□ 1.01
CACNA1A-243ENST00000637616 DNAJC9Q8WXX5 260 aa21.39■■□□□ 1.01
CACNA1A-243ENST00000637616 C10orf88Q9H8K7 445 aa21.39■■□□□ 1.01
CACNA1A-243ENST00000637616 KCND2Q9NZV8 630 aa21.39■■□□□ 1.01
CACNA1A-243ENST00000637616 ZNF148Q9UQR1 794 aa21.39■■□□□ 1.01
CACNA1A-243ENST00000637616 DCTN3O75935 186 aa21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms