RNA–Protein interactions for RNA: ENST00000637212.1

LINC00643-207, long intergenic non-protein coding RNA 643, humanhuman

BASIC

Gene LINC00643, Length 734 nt, Biotype transcribed unitary pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-207ENST00000637212 FAM163BP0C2L3 166 aa14.4□□□□□ -0.1
LINC00643-207ENST00000637212 P4HA1P13674 534 aa14.4□□□□□ -0.1
LINC00643-207ENST00000637212 TBXAS1P24557 533 aaPredicted RBP14.4□□□□□ -0.1
LINC00643-207ENST00000637212 HNRNPH3P31942 346 aaKnown RBP14.4□□□□□ -0.1
LINC00643-207ENST00000637212 FXR1P51114 621 aaKnown RBP eCLIP14.4□□□□□ -0.1
LINC00643-207ENST00000637212 FPGSQ05932 587 aa14.4□□□□□ -0.1
LINC00643-207ENST00000637212 GRIK3Q13003 919 aa14.4□□□□□ -0.1
LINC00643-207ENST00000637212 NAB2Q15742 525 aa14.4□□□□□ -0.1
LINC00643-207ENST00000637212 HS1BP3Q53T59 392 aa14.4□□□□□ -0.1
LINC00643-207ENST00000637212 C9orf57Q5W0N0 161 aa14.4□□□□□ -0.1
LINC00643-207ENST00000637212 IQCEQ6IPM2 695 aa14.4□□□□□ -0.1
LINC00643-207ENST00000637212 C7orf61Q8IZ16 206 aa14.4□□□□□ -0.1
LINC00643-207ENST00000637212 TC2NQ8N9U0 490 aa14.4□□□□□ -0.1
LINC00643-207ENST00000637212 BAP1Q92560 729 aa14.4□□□□□ -0.1
LINC00643-207ENST00000637212 C18orf25Q96B23 403 aaPredicted RBP14.4□□□□□ -0.1
LINC00643-207ENST00000637212 HPDLQ96IR7 371 aa14.4□□□□□ -0.1
LINC00643-207ENST00000637212 DNAJC7Q99615 494 aa14.4□□□□□ -0.1
LINC00643-207ENST00000637212 LRRN2O75325 713 aa14.39□□□□□ -0.11
LINC00643-207ENST00000637212 POLR2BP30876 1174 aaKnown RBP14.39□□□□□ -0.11
LINC00643-207ENST00000637212 STAT1P42224 750 aa14.39□□□□□ -0.11
LINC00643-207ENST00000637212 SCNN1GP51170 649 aa14.39□□□□□ -0.11
LINC00643-207ENST00000637212 ADKP55263 362 aaKnown RBP14.39□□□□□ -0.11
LINC00643-207ENST00000637212 LRMPQ12912 555 aa14.39□□□□□ -0.11
LINC00643-207ENST00000637212 ZNF699Q32M78 642 aa14.39□□□□□ -0.11
LINC00643-207ENST00000637212 GLRA4Q5JXX5 417 aa14.39□□□□□ -0.11
LINC00643-207ENST00000637212 CLLU1OSQ5K130 101 aa14.39□□□□□ -0.11
LINC00643-207ENST00000637212 RRAGAQ7L523 313 aa14.39□□□□□ -0.11
LINC00643-207ENST00000637212 ABI1Q8IZP0 508 aa14.39□□□□□ -0.11
LINC00643-207ENST00000637212 DPF3Q92784 378 aa14.39□□□□□ -0.11
LINC00643-207ENST00000637212 BADQ92934 168 aa14.39□□□□□ -0.11
LINC00643-207ENST00000637212 TATDN2Q93075 761 aa14.39□□□□□ -0.11
LINC00643-207ENST00000637212 TOP1MTQ969P6 601 aa14.39□□□□□ -0.11
LINC00643-207ENST00000637212 FAM84AQ96KN4 292 aa14.39□□□□□ -0.11
LINC00643-207ENST00000637212 PI4K2AQ9BTU6 479 aa14.39□□□□□ -0.11
LINC00643-207ENST00000637212 RNF19AQ9NV58 838 aa14.39□□□□□ -0.11
LINC00643-207ENST00000637212 ZNHIT6Q9NWK9 470 aaKnown RBP14.39□□□□□ -0.11
LINC00643-207ENST00000637212 AIPL1Q9NZN9 384 aa14.39□□□□□ -0.11
LINC00643-207ENST00000637212 TUBGCP4Q9UGJ1 667 aa14.39□□□□□ -0.11
LINC00643-207ENST00000637212 PLAGL2Q9UPG8 496 aa14.39□□□□□ -0.11
LINC00643-207ENST00000637212 NUB1Q9Y5A7 615 aa14.39□□□□□ -0.11
LINC00643-207ENST00000637212 CCDC172P0C7W6 258 aa14.38□□□□□ -0.11
LINC00643-207ENST00000637212 FGFR1P11362 822 aa14.38□□□□□ -0.11
LINC00643-207ENST00000637212 AFF1P51825 1210 aaKnown RBP14.38□□□□□ -0.11
LINC00643-207ENST00000637212 JAM2P57087 298 aa14.38□□□□□ -0.11
LINC00643-207ENST00000637212 NOP14P78316 857 aaKnown RBP14.38□□□□□ -0.11
LINC00643-207ENST00000637212 CDK17Q00537 523 aa14.38□□□□□ -0.11
LINC00643-207ENST00000637212 APBA1Q02410 837 aa14.38□□□□□ -0.11
LINC00643-207ENST00000637212 TUSC3Q13454 348 aa14.38□□□□□ -0.11
LINC00643-207ENST00000637212 DRAP1Q14919 205 aaPredicted RBP14.38□□□□□ -0.11
LINC00643-207ENST00000637212 ZNF667Q5HYK9 610 aa14.38□□□□□ -0.11
LINC00643-207ENST00000637212 PDXDC1Q6P996 788 aa14.38□□□□□ -0.11
LINC00643-207ENST00000637212 DCLRE1AQ6PJP8 1040 aa14.38□□□□□ -0.11
LINC00643-207ENST00000637212 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.38□□□□□ -0.11
LINC00643-207ENST00000637212 C16orf59Q7L2K0 433 aa14.38□□□□□ -0.11
LINC00643-207ENST00000637212 ARHGEF19Q8IW93 802 aa14.38□□□□□ -0.11
LINC00643-207ENST00000637212 LRRC8AQ8IWT6 810 aa14.38□□□□□ -0.11
LINC00643-207ENST00000637212 PPM1KQ8N3J5 372 aa14.38□□□□□ -0.11
LINC00643-207ENST00000637212 TTC39CQ8N584 583 aa14.38□□□□□ -0.11
LINC00643-207ENST00000637212 ZNF560Q96MR9 790 aa14.38□□□□□ -0.11
LINC00643-207ENST00000637212 CASD1Q96PB1 797 aa14.38□□□□□ -0.11
LINC00643-207ENST00000637212 SPAG5Q96R06 1193 aa14.38□□□□□ -0.11
LINC00643-207ENST00000637212 NIF3L1Q9GZT8 377 aa14.38□□□□□ -0.11
LINC00643-207ENST00000637212 CYP3A43Q9HB55 503 aa14.38□□□□□ -0.11
LINC00643-207ENST00000637212 APOBEC3GQ9HC16 384 aaKnown RBP14.38□□□□□ -0.11
LINC00643-207ENST00000637212 NLRC4Q9NPP4 1024 aa14.38□□□□□ -0.11
LINC00643-207ENST00000637212 NR2E3Q9Y5X4 410 aa14.38□□□□□ -0.11
LINC00643-207ENST00000637212 FHOD1Q9Y613 1164 aa14.38□□□□□ -0.11
LINC00643-207ENST00000637212 FOXN3O00409 490 aaPredicted RBP14.37□□□□□ -0.11
LINC00643-207ENST00000637212 NRDCO43847 1150 aa14.37□□□□□ -0.11
LINC00643-207ENST00000637212 DGKIO75912 1065 aa14.37□□□□□ -0.11
LINC00643-207ENST00000637212 POMCP01189 267 aa14.37□□□□□ -0.11
LINC00643-207ENST00000637212 FECHP22830 423 aa14.37□□□□□ -0.11
LINC00643-207ENST00000637212 GUCY2FP51841 1108 aa14.37□□□□□ -0.11
LINC00643-207ENST00000637212 YWHAEP62258 255 aaKnown RBP14.37□□□□□ -0.11
LINC00643-207ENST00000637212 SOX4Q06945 474 aaPredicted RBP14.37□□□□□ -0.11
LINC00643-207ENST00000637212 CUL2Q13617 745 aa14.37□□□□□ -0.11
LINC00643-207ENST00000637212 UPP1Q16831 310 aa14.37□□□□□ -0.11
LINC00643-207ENST00000637212 WDR72Q3MJ13 1102 aa14.37□□□□□ -0.11
LINC00643-207ENST00000637212 SFMBT2Q5VUG0 894 aa14.37□□□□□ -0.11
LINC00643-207ENST00000637212 SCARA3Q6AZY7 606 aa14.37□□□□□ -0.11
LINC00643-207ENST00000637212 GJB7Q6PEY0 223 aa14.37□□□□□ -0.11
LINC00643-207ENST00000637212 PSRC1Q6PGN9 363 aaPredicted RBP14.37□□□□□ -0.11
LINC00643-207ENST00000637212 DPH6Q7L8W6 267 aa14.37□□□□□ -0.11
LINC00643-207ENST00000637212 CCDC112Q8NEF3 446 aa14.37□□□□□ -0.11
LINC00643-207ENST00000637212 SHC3Q92529 594 aa14.37□□□□□ -0.11
LINC00643-207ENST00000637212 KREMEN1Q96MU8 473 aa14.37□□□□□ -0.11
LINC00643-207ENST00000637212 LBHD1Q9BQE6 289 aaPredicted RBP14.37□□□□□ -0.11
LINC00643-207ENST00000637212 MRPL9Q9BYD2 267 aaKnown RBP14.37□□□□□ -0.11
LINC00643-207ENST00000637212 ABHD10Q9NUJ1 306 aa14.37□□□□□ -0.11
LINC00643-207ENST00000637212 GDAP2Q9NXN4 497 aa14.37□□□□□ -0.11
LINC00643-207ENST00000637212 CNTN6Q9UQ52 1028 aa14.37□□□□□ -0.11
LINC00643-207ENST00000637212 INPP5FQ9Y2H2 1132 aa14.37□□□□□ -0.11
LINC00643-207ENST00000637212 BZW2Q9Y6E2 419 aaKnown RBP14.37□□□□□ -0.11
LINC00643-207ENST00000637212 LRRC53A6NM62 1247 aa14.36□□□□□ -0.11
LINC00643-207ENST00000637212 KPNA7A9QM74 516 aa14.36□□□□□ -0.11
LINC00643-207ENST00000637212 PODXLO00592 558 aa14.36□□□□□ -0.11
LINC00643-207ENST00000637212 ACRP10323 421 aa14.36□□□□□ -0.11
LINC00643-207ENST00000637212 FERP16591 822 aa14.36□□□□□ -0.11
LINC00643-207ENST00000637212 IBSPP21815 317 aaPredicted RBP14.36□□□□□ -0.11
LINC00643-207ENST00000637212 SOX5P35711 763 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms