RNA–Protein interactions for RNA: ENST00000635625.1

PTPN11-205, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene PTPN11, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-205ENST00000635625 PYGMP11217 842 aa13.22□□□□□ -0.29
PTPN11-205ENST00000635625 ATP4AP20648 1035 aa13.22□□□□□ -0.29
PTPN11-205ENST00000635625 LSP1P33241 339 aa13.22□□□□□ -0.29
PTPN11-205ENST00000635625 SOX10P56693 466 aa13.22□□□□□ -0.29
PTPN11-205ENST00000635625 NLRP11P59045 1033 aaKnown RBP13.22□□□□□ -0.29
PTPN11-205ENST00000635625 IER5Q5VY09 327 aa13.22□□□□□ -0.29
PTPN11-205ENST00000635625 KCTD16Q68DU8 428 aa13.22□□□□□ -0.29
PTPN11-205ENST00000635625 CEP128Q6ZU80 1094 aa13.22□□□□□ -0.29
PTPN11-205ENST00000635625 MON1BQ7L1V2 547 aa13.22□□□□□ -0.29
PTPN11-205ENST00000635625 TRMT1LQ7Z2T5 733 aaKnown RBP13.22□□□□□ -0.29
PTPN11-205ENST00000635625 WDR49Q8IV35 697 aa13.22□□□□□ -0.29
PTPN11-205ENST00000635625 BRSK2Q8IWQ3 736 aa13.22□□□□□ -0.29
PTPN11-205ENST00000635625 SH2D3CQ8N5H7 860 aa13.22□□□□□ -0.29
PTPN11-205ENST00000635625 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.22□□□□□ -0.29
PTPN11-205ENST00000635625 ZNF516Q92618 1163 aa13.22□□□□□ -0.29
PTPN11-205ENST00000635625 C18orf8Q96DM3 657 aa13.22□□□□□ -0.29
PTPN11-205ENST00000635625 RNF181Q9P0P0 153 aa13.22□□□□□ -0.29
PTPN11-205ENST00000635625 MYO1CO00159 1063 aa13.21□□□□□ -0.29
PTPN11-205ENST00000635625 NDUFAB1O14561 156 aa13.21□□□□□ -0.29
PTPN11-205ENST00000635625 IRF6O14896 467 aa13.21□□□□□ -0.29
PTPN11-205ENST00000635625 PROSCO94903 275 aa13.21□□□□□ -0.29
PTPN11-205ENST00000635625 ACO1P21399 889 aaKnown RBP13.21□□□□□ -0.29
PTPN11-205ENST00000635625 CETN2P41208 172 aa13.21□□□□□ -0.29
PTPN11-205ENST00000635625 MARCKSL1P49006 195 aa13.21□□□□□ -0.29
PTPN11-205ENST00000635625 CORO7P57737 925 aa13.21□□□□□ -0.29
PTPN11-205ENST00000635625 PPP2R2AP63151 447 aa13.21□□□□□ -0.29
PTPN11-205ENST00000635625 SP2Q02086 613 aa13.21□□□□□ -0.29
PTPN11-205ENST00000635625 SP4Q02446 784 aa13.21□□□□□ -0.29
PTPN11-205ENST00000635625 ADCY2Q08462 1091 aa13.21□□□□□ -0.29
PTPN11-205ENST00000635625 CALCOCO2Q13137 446 aa13.21□□□□□ -0.29
PTPN11-205ENST00000635625 PDCLQ13371 301 aa13.21□□□□□ -0.29
PTPN11-205ENST00000635625 BYSLQ13895 437 aaKnown RBP13.21□□□□□ -0.29
PTPN11-205ENST00000635625 MXD4Q14582 209 aaPredicted RBP13.21□□□□□ -0.29
PTPN11-205ENST00000635625 PTGISQ16647 500 aa13.21□□□□□ -0.29
PTPN11-205ENST00000635625 CDCA2Q69YH5 1023 aaPredicted RBP13.21□□□□□ -0.29
PTPN11-205ENST00000635625 GPR153Q6NV75 609 aa13.21□□□□□ -0.29
PTPN11-205ENST00000635625 ZDHHC24Q6UX98 284 aa13.21□□□□□ -0.29
PTPN11-205ENST00000635625 CRELD2Q6UXH1 353 aaPredicted RBP13.21□□□□□ -0.29
PTPN11-205ENST00000635625 CCDC105Q8IYK2 499 aa13.21□□□□□ -0.29
PTPN11-205ENST00000635625 ABRAQ8N0Z2 381 aa13.21□□□□□ -0.29
PTPN11-205ENST00000635625 SEPT1Q8WYJ6 367 aa13.21□□□□□ -0.29
PTPN11-205ENST00000635625 TMEM143Q96AN5 459 aa13.21□□□□□ -0.29
PTPN11-205ENST00000635625 ZBTB9Q96C00 473 aa13.21□□□□□ -0.29
PTPN11-205ENST00000635625 PGM2Q96G03 612 aa13.21□□□□□ -0.29
PTPN11-205ENST00000635625 MRPL4Q9BYD3 311 aaKnown RBP13.21□□□□□ -0.29
PTPN11-205ENST00000635625 GRHL1Q9NZI5 618 aa13.21□□□□□ -0.29
PTPN11-205ENST00000635625 GSTTP1A0A1W2PQM5 241 aa13.2□□□□□ -0.3
PTPN11-205ENST00000635625 USP2O75604 605 aaPredicted RBP13.2□□□□□ -0.3
PTPN11-205ENST00000635625 GAS8O95995 478 aa13.2□□□□□ -0.3
PTPN11-205ENST00000635625 RARGP13631 454 aa13.2□□□□□ -0.3
PTPN11-205ENST00000635625 SLC26A2P50443 739 aa13.2□□□□□ -0.3
PTPN11-205ENST00000635625 STAT5BP51692 787 aa13.2□□□□□ -0.3
PTPN11-205ENST00000635625 VGLL4Q14135 290 aa13.2□□□□□ -0.3
PTPN11-205ENST00000635625 SIX1Q15475 284 aaPredicted RBP13.2□□□□□ -0.3
PTPN11-205ENST00000635625 KRT71Q3SY84 523 aa13.2□□□□□ -0.3
PTPN11-205ENST00000635625 SEPT14Q6ZU15 432 aa13.2□□□□□ -0.3
PTPN11-205ENST00000635625 TRMT10CQ7L0Y3 403 aaKnown RBP13.2□□□□□ -0.3
PTPN11-205ENST00000635625 ZBTB8OSQ8IWT0 167 aa13.2□□□□□ -0.3
PTPN11-205ENST00000635625 BBOF1Q8ND07 529 aa13.2□□□□□ -0.3
PTPN11-205ENST00000635625 GLG1Q92896 1179 aa13.2□□□□□ -0.3
PTPN11-205ENST00000635625 ART4Q93070 314 aa13.2□□□□□ -0.3
PTPN11-205ENST00000635625 CENPTQ96BT3 561 aa13.2□□□□□ -0.3
PTPN11-205ENST00000635625 TLCD1Q96CP7 247 aa13.2□□□□□ -0.3
PTPN11-205ENST00000635625 FAXDC2Q96IV6 333 aa13.2□□□□□ -0.3
PTPN11-205ENST00000635625 SPATC1LQ9H0A9 340 aa13.2□□□□□ -0.3
PTPN11-205ENST00000635625 AZI2Q9H6S1 392 aa13.2□□□□□ -0.3
PTPN11-205ENST00000635625 NDC80O14777 642 aa13.2□□□□□ -0.3
PTPN11-205ENST00000635625 LGR5O75473 907 aa13.2□□□□□ -0.3
PTPN11-205ENST00000635625 TOM1L1O75674 476 aa13.2□□□□□ -0.3
PTPN11-205ENST00000635625 VNN1O95497 513 aa13.2□□□□□ -0.3
PTPN11-205ENST00000635625 RARAP10276 462 aa13.2□□□□□ -0.3
PTPN11-205ENST00000635625 ITIH2P19823 946 aa13.2□□□□□ -0.3
PTPN11-205ENST00000635625 GNA15P30679 374 aa13.2□□□□□ -0.3
PTPN11-205ENST00000635625 RPL21P46778 160 aaKnown RBP13.2□□□□□ -0.3
PTPN11-205ENST00000635625 ATP1A2P50993 1020 aa13.2□□□□□ -0.3
PTPN11-205ENST00000635625 ZNF132P52740 706 aa13.2□□□□□ -0.3
PTPN11-205ENST00000635625 PLTPP55058 493 aa13.2□□□□□ -0.3
PTPN11-205ENST00000635625 YWHAEP62258 255 aaKnown RBP13.2□□□□□ -0.3
PTPN11-205ENST00000635625 NOMO3P69849 1222 aa13.2□□□□□ -0.3
PTPN11-205ENST00000635625 NOP14P78316 857 aaKnown RBP13.2□□□□□ -0.3
PTPN11-205ENST00000635625 TAP1Q03518 808 aa13.2□□□□□ -0.3
PTPN11-205ENST00000635625 CAPSQ13938 189 aa13.2□□□□□ -0.3
PTPN11-205ENST00000635625 SGO2Q562F6 1265 aa13.2□□□□□ -0.3
PTPN11-205ENST00000635625 ARSIQ5FYB1 569 aa13.2□□□□□ -0.3
PTPN11-205ENST00000635625 RHOT1Q8IXI2 618 aa13.2□□□□□ -0.3
PTPN11-205ENST00000635625 KATNAL2Q8IYT4 538 aa13.2□□□□□ -0.3
PTPN11-205ENST00000635625 PI4K2AQ9BTU6 479 aa13.2□□□□□ -0.3
PTPN11-205ENST00000635625 TRIM31Q9BZY9 425 aa13.2□□□□□ -0.3
PTPN11-205ENST00000635625 ZNF518BQ9C0D4 1074 aa13.2□□□□□ -0.3
PTPN11-205ENST00000635625 SLC12A6Q9UHW9 1150 aa13.2□□□□□ -0.3
PTPN11-205ENST00000635625 ATP8A1Q9Y2Q0 1164 aa13.2□□□□□ -0.3
PTPN11-205ENST00000635625 SNX24Q9Y343 169 aa13.2□□□□□ -0.3
PTPN11-205ENST00000635625 PCDHB4Q9Y5E5 795 aa13.2□□□□□ -0.3
PTPN11-205ENST00000635625 MROH7Q68CQ1 1323 aa13.2□□□□□ -0.3
PTPN11-205ENST00000635625 CNTNAP2Q9UHC6 1331 aa13.2□□□□□ -0.3
PTPN11-205ENST00000635625 CXCL11O14625 94 aa13.19□□□□□ -0.3
PTPN11-205ENST00000635625 CLDN3O15551 220 aa13.19□□□□□ -0.3
PTPN11-205ENST00000635625 THAP12O43422 761 aa13.19□□□□□ -0.3
PTPN11-205ENST00000635625 CALB1P05937 261 aa13.19□□□□□ -0.3
PTPN11-205ENST00000635625 HOXB1P14653 301 aaPredicted RBP13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms