RNA–Protein interactions for RNA: ENST00000629047.1

SPTAN1-216, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-216ENST00000629047 GMNNO75496 209 aa2.22□□□□□ -2.05
SPTAN1-216ENST00000629047 PDE5AO76074 875 aa2.22□□□□□ -2.05
SPTAN1-216ENST00000629047 PRPF6O94906 941 aaKnown RBP2.22□□□□□ -2.05
SPTAN1-216ENST00000629047 MBD4O95243 580 aa2.22□□□□□ -2.05
SPTAN1-216ENST00000629047 LCA5LO95447 670 aa2.22□□□□□ -2.05
SPTAN1-216ENST00000629047 PARNO95453 639 aaKnown RBP2.22□□□□□ -2.05
SPTAN1-216ENST00000629047 BAG3O95817 575 aa2.22□□□□□ -2.05
SPTAN1-216ENST00000629047 SYF2O95926 243 aaKnown RBP2.22□□□□□ -2.05
SPTAN1-216ENST00000629047 KRT6AP02538 564 aa2.22□□□□□ -2.05
SPTAN1-216ENST00000629047 KRT6BP04259 564 aa2.22□□□□□ -2.05
SPTAN1-216ENST00000629047 ERBB2P04626 1255 aa2.22□□□□□ -2.05
SPTAN1-216ENST00000629047 GNAI3P08754 354 aa2.22□□□□□ -2.05
SPTAN1-216ENST00000629047 GOLGA8HP0CJ92 632 aa2.22□□□□□ -2.05
SPTAN1-216ENST00000629047 GSPT1P15170 499 aaKnown RBP2.22□□□□□ -2.05
SPTAN1-216ENST00000629047 NQO1P15559 274 aaKnown RBP2.22□□□□□ -2.05
SPTAN1-216ENST00000629047 TCP1P17987 556 aaKnown RBP2.22□□□□□ -2.05
SPTAN1-216ENST00000629047 GNAT2P19087 354 aa2.22□□□□□ -2.05
SPTAN1-216ENST00000629047 KCNA3P22001 575 aa2.22□□□□□ -2.05
SPTAN1-216ENST00000629047 ALDH1B1P30837 517 aa2.22□□□□□ -2.05
SPTAN1-216ENST00000629047 HPDP32754 393 aaPredicted RBP2.22□□□□□ -2.05
SPTAN1-216ENST00000629047 TRPC1P48995 793 aa2.22□□□□□ -2.05
SPTAN1-216ENST00000629047 GNAQP50148 359 aa2.22□□□□□ -2.05
SPTAN1-216ENST00000629047 CCT4P50991 539 aaKnown RBP2.22□□□□□ -2.05
SPTAN1-216ENST00000629047 GUCY2FP51841 1108 aa2.22□□□□□ -2.05
SPTAN1-216ENST00000629047 CCNG1P51959 295 aa2.22□□□□□ -2.05
SPTAN1-216ENST00000629047 AK2P54819 239 aa2.22□□□□□ -2.05
SPTAN1-216ENST00000629047 INHBCP55103 352 aa2.22□□□□□ -2.05
SPTAN1-216ENST00000629047 ADARP55265 1226 aaKnown RBP2.22□□□□□ -2.05
SPTAN1-216ENST00000629047 EIF3BP55884 814 aaKnown RBP2.22□□□□□ -2.05
SPTAN1-216ENST00000629047 HDAC4P56524 1084 aa2.22□□□□□ -2.05
SPTAN1-216ENST00000629047 KRTAP10-6P60371 365 aaPredicted RBP2.22□□□□□ -2.05
SPTAN1-216ENST00000629047 NOP14P78316 857 aaKnown RBP2.22□□□□□ -2.05
SPTAN1-216ENST00000629047 BASP1P80723 227 aaKnown RBP2.22□□□□□ -2.05
SPTAN1-216ENST00000629047 COG7P83436 770 aa2.22□□□□□ -2.05
SPTAN1-216ENST00000629047 PTH1RQ03431 593 aa2.22□□□□□ -2.05
SPTAN1-216ENST00000629047 COL10A1Q03692 680 aa2.22□□□□□ -2.05
SPTAN1-216ENST00000629047 RNASELQ05823 741 aaKnown RBP2.22□□□□□ -2.05
SPTAN1-216ENST00000629047 SPAG1Q07617 926 aa2.22□□□□□ -2.05
SPTAN1-216ENST00000629047 TBL3Q12788 808 aaKnown RBP2.22□□□□□ -2.05
SPTAN1-216ENST00000629047 FOXD4Q12950 439 aaPredicted RBP2.22□□□□□ -2.05
SPTAN1-216ENST00000629047 ITGA9Q13797 1035 aa2.22□□□□□ -2.05
SPTAN1-216ENST00000629047 BYSLQ13895 437 aaKnown RBP2.22□□□□□ -2.05
SPTAN1-216ENST00000629047 RASGRF1Q13972 1273 aa2.22□□□□□ -2.05
SPTAN1-216ENST00000629047 MYBPC3Q14896 1274 aa2.22□□□□□ -2.05
SPTAN1-216ENST00000629047 NONOQ15233 471 aaKnown RBP eCLIP2.22□□□□□ -2.05
SPTAN1-216ENST00000629047 CLUL1Q15846 466 aa2.22□□□□□ -2.05
SPTAN1-216ENST00000629047 ADRM1Q16186 407 aa2.22□□□□□ -2.05
SPTAN1-216ENST00000629047 CLPPQ16740 277 aaPredicted RBP2.22□□□□□ -2.05
SPTAN1-216ENST00000629047 GSTA3Q16772 222 aa2.22□□□□□ -2.05
SPTAN1-216ENST00000629047 LSM12Q3MHD2 195 aaKnown RBP2.22□□□□□ -2.05
SPTAN1-216ENST00000629047 PDCD4Q53EL6 469 aaKnown RBP2.22□□□□□ -2.05
SPTAN1-216ENST00000629047 ANKRD20A2Q5SQ80 823 aa2.22□□□□□ -2.05
SPTAN1-216ENST00000629047 MAP3K21Q5TCX8 1036 aa2.22□□□□□ -2.05
SPTAN1-216ENST00000629047 ANKRD20A1Q5TYW2 823 aa2.22□□□□□ -2.05
SPTAN1-216ENST00000629047 AGBL2Q5U5Z8 902 aa2.22□□□□□ -2.05
SPTAN1-216ENST00000629047 ANKRD20A3Q5VUR7 823 aa2.22□□□□□ -2.05
SPTAN1-216ENST00000629047 DAB2IPQ5VWQ8 1189 aa2.22□□□□□ -2.05
SPTAN1-216ENST00000629047 NXNQ6DKJ4 435 aa2.22□□□□□ -2.05
SPTAN1-216ENST00000629047 NCAPH2Q6IBW4 605 aa2.22□□□□□ -2.05
SPTAN1-216ENST00000629047 ARMCX5Q6P1M9 558 aa2.22□□□□□ -2.05
SPTAN1-216ENST00000629047 PDXDC1Q6P996 788 aa2.22□□□□□ -2.05
SPTAN1-216ENST00000629047 TRIM65Q6PJ69 517 aa2.22□□□□□ -2.05
SPTAN1-216ENST00000629047 BLOC1S2Q6QNY1 142 aa2.22□□□□□ -2.05
SPTAN1-216ENST00000629047 SLC4A10Q6U841 1118 aa2.22□□□□□ -2.05
SPTAN1-216ENST00000629047 LRIG3Q6UXM1 1119 aa2.22□□□□□ -2.05
SPTAN1-216ENST00000629047 CCNI2Q6ZMN8 369 aaPredicted RBP2.22□□□□□ -2.05
SPTAN1-216ENST00000629047 TAOK1Q7L7X3 1001 aa2.22□□□□□ -2.05
SPTAN1-216ENST00000629047 TBC1D1Q86TI0 1168 aaPredicted RBP2.22□□□□□ -2.05
SPTAN1-216ENST00000629047 JAMLQ86YT9 394 aa2.22□□□□□ -2.05
SPTAN1-216ENST00000629047 PASD1Q8IV76 773 aa2.22□□□□□ -2.05
SPTAN1-216ENST00000629047 DHX40Q8IX18 779 aaKnown RBP2.22□□□□□ -2.05
SPTAN1-216ENST00000629047 AMER2Q8N7J2 671 aa2.22□□□□□ -2.05
SPTAN1-216ENST00000629047 SCAIQ8N9R8 606 aa2.22□□□□□ -2.05
SPTAN1-216ENST00000629047 MLKLQ8NB16 471 aa2.22□□□□□ -2.05
SPTAN1-216ENST00000629047 VPS37AQ8NEZ2 397 aa2.22□□□□□ -2.05
SPTAN1-216ENST00000629047 FBXO27Q8NI29 283 aa2.22□□□□□ -2.05
SPTAN1-216ENST00000629047 MYCBPAPQ8TBZ2 947 aa2.22□□□□□ -2.05
SPTAN1-216ENST00000629047 MORC4Q8TE76 937 aa2.22□□□□□ -2.05
SPTAN1-216ENST00000629047 DQX1Q8TE96 717 aaKnown RBP2.22□□□□□ -2.05
SPTAN1-216ENST00000629047 DNAJC9Q8WXX5 260 aa2.22□□□□□ -2.05
SPTAN1-216ENST00000629047 LARP4BQ92615 738 aaKnown RBP2.22□□□□□ -2.05
SPTAN1-216ENST00000629047 TAF4BQ92750 862 aa2.22□□□□□ -2.05
SPTAN1-216ENST00000629047 CAVIN3Q969G5 261 aa2.22□□□□□ -2.05
SPTAN1-216ENST00000629047 TSPAN17Q96FV3 270 aa2.22□□□□□ -2.05
SPTAN1-216ENST00000629047 CHMP6Q96FZ7 201 aa2.22□□□□□ -2.05
SPTAN1-216ENST00000629047 SEC16BQ96JE7 1060 aa2.22□□□□□ -2.05
SPTAN1-216ENST00000629047 LCORQ96JN0 433 aaPredicted RBP2.22□□□□□ -2.05
SPTAN1-216ENST00000629047 C8orf76Q96K31 380 aa2.22□□□□□ -2.05
SPTAN1-216ENST00000629047 ATP6V1G3Q96LB4 118 aa2.22□□□□□ -2.05
SPTAN1-216ENST00000629047 ZSWIM3Q96MP5 696 aa2.22□□□□□ -2.05
SPTAN1-216ENST00000629047 TUBGCP5Q96RT8 1024 aa2.22□□□□□ -2.05
SPTAN1-216ENST00000629047 WDR24Q96S15 920 aa2.22□□□□□ -2.05
SPTAN1-216ENST00000629047 PNKPQ96T60 521 aa2.22□□□□□ -2.05
SPTAN1-216ENST00000629047 TTC1Q99614 292 aa2.22□□□□□ -2.05
SPTAN1-216ENST00000629047 CCT7Q99832 543 aa2.22□□□□□ -2.05
SPTAN1-216ENST00000629047 SH3GL2Q99962 352 aa2.22□□□□□ -2.05
SPTAN1-216ENST00000629047 RIOK1Q9BRS2 568 aaKnown RBP2.22□□□□□ -2.05
SPTAN1-216ENST00000629047 LLPHQ9BRT6 129 aaKnown RBP2.22□□□□□ -2.05
SPTAN1-216ENST00000629047 SLC12A9Q9BXP2 914 aa2.22□□□□□ -2.05
SPTAN1-216ENST00000629047 FTOQ9C0B1 505 aaKnown RBP eCLIP2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms