RNA–Protein interactions for RNA: ENST00000627809.1

SPTAN1-213, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 3

Gene SPTAN1, Length 342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-213ENST00000627809 SCP2P22307 547 aa8.8□□□□□ -1
SPTAN1-213ENST00000627809 VCPP55072 806 aaKnown RBP8.8□□□□□ -1
SPTAN1-213ENST00000627809 ASIC1P78348 528 aa8.8□□□□□ -1
SPTAN1-213ENST00000627809 PCBP1Q15365 356 aaKnown RBP eCLIP8.8□□□□□ -1
SPTAN1-213ENST00000627809 PSMD5Q16401 504 aa8.8□□□□□ -1
SPTAN1-213ENST00000627809 SLC5A9Q2M3M2 681 aa8.8□□□□□ -1
SPTAN1-213ENST00000627809 FAM43BQ6ZT52 329 aaPredicted RBP8.8□□□□□ -1
SPTAN1-213ENST00000627809 CCDC65Q8IXS2 484 aa8.8□□□□□ -1
SPTAN1-213ENST00000627809 CCDC47Q96A33 483 aaKnown RBP8.8□□□□□ -1
SPTAN1-213ENST00000627809 PHOX2BQ99453 314 aa8.8□□□□□ -1
SPTAN1-213ENST00000627809 LPIN3Q9BQK8 851 aa8.8□□□□□ -1
SPTAN1-213ENST00000627809 TCHPQ9BT92 498 aa8.8□□□□□ -1
SPTAN1-213ENST00000627809 PHF7Q9BWX1 381 aaPredicted RBP8.8□□□□□ -1
SPTAN1-213ENST00000627809 TOPORSQ9NS56 1045 aaPredicted RBP8.8□□□□□ -1
SPTAN1-213ENST00000627809 PANK4Q9NVE7 773 aa8.8□□□□□ -1
SPTAN1-213ENST00000627809 SEL1LQ9UBV2 794 aa8.8□□□□□ -1
SPTAN1-213ENST00000627809 PUF60Q9UHX1 559 aaKnown RBP8.8□□□□□ -1
SPTAN1-213ENST00000627809 FBXW11Q9UKB1 542 aa8.8□□□□□ -1
SPTAN1-213ENST00000627809 CDY1Q9Y6F8 540 aa8.8□□□□□ -1
SPTAN1-213ENST00000627809 NUP210Q8TEM1 1887 aaPredicted RBP8.8□□□□□ -1
SPTAN1-213ENST00000627809 MYH10P35580 1976 aa8.8□□□□□ -1
SPTAN1-213ENST00000627809 MYOFQ9NZM1 2061 aa8.79□□□□□ -1
SPTAN1-213ENST00000627809 CACNA1IQ9P0X4 2223 aa8.79□□□□□ -1
SPTAN1-213ENST00000627809 H0YCG3 227 aa8.79□□□□□ -1
SPTAN1-213ENST00000627809 TADA2AO75478 443 aa8.79□□□□□ -1
SPTAN1-213ENST00000627809 MBD3O95983 291 aa8.79□□□□□ -1
SPTAN1-213ENST00000627809 ABCD1P33897 745 aa8.79□□□□□ -1
SPTAN1-213ENST00000627809 OR1D2P34982 312 aa8.79□□□□□ -1
SPTAN1-213ENST00000627809 CCR2P41597 374 aa8.79□□□□□ -1
SPTAN1-213ENST00000627809 LIG4P49917 911 aa8.79□□□□□ -1
SPTAN1-213ENST00000627809 ROR1Q01973 937 aa8.79□□□□□ -1
SPTAN1-213ENST00000627809 POSTNQ15063 836 aa8.79□□□□□ -1
SPTAN1-213ENST00000627809 HERC4Q5GLZ8 1057 aaPredicted RBP8.79□□□□□ -1
SPTAN1-213ENST00000627809 VARS2Q5ST30 1063 aaKnown RBP8.79□□□□□ -1
SPTAN1-213ENST00000627809 KIAA1841Q6NSI8 718 aa8.79□□□□□ -1
SPTAN1-213ENST00000627809 ZPBP2Q6X784 338 aa8.79□□□□□ -1
SPTAN1-213ENST00000627809 UNC13DQ70J99 1090 aa8.79□□□□□ -1
SPTAN1-213ENST00000627809 EPM2AIP1Q7L775 607 aaPredicted RBP8.79□□□□□ -1
SPTAN1-213ENST00000627809 GPR149Q86SP6 731 aa8.79□□□□□ -1
SPTAN1-213ENST00000627809 OSTM1Q86WC4 334 aa8.79□□□□□ -1
SPTAN1-213ENST00000627809 CBWD2Q8IUF1 395 aa8.79□□□□□ -1
SPTAN1-213ENST00000627809 GPIHBP1Q8IV16 184 aa8.79□□□□□ -1
SPTAN1-213ENST00000627809 OR10T2Q8NGX3 314 aa8.79□□□□□ -1
SPTAN1-213ENST00000627809 ITFG1Q8TB96 612 aa8.79□□□□□ -1
SPTAN1-213ENST00000627809 ING5Q8WYH8 240 aa8.79□□□□□ -1
SPTAN1-213ENST00000627809 PIK3R5Q8WYR1 880 aa8.79□□□□□ -1
SPTAN1-213ENST00000627809 RSPH1Q8WYR4 309 aa8.79□□□□□ -1
SPTAN1-213ENST00000627809 CASP10Q92851 521 aa8.79□□□□□ -1
SPTAN1-213ENST00000627809 KCNN1Q92952 543 aa8.79□□□□□ -1
SPTAN1-213ENST00000627809 TCEAL4Q96EI5 215 aa8.79□□□□□ -1
SPTAN1-213ENST00000627809 FAM212AQ96EL1 285 aa8.79□□□□□ -1
SPTAN1-213ENST00000627809 KIF12Q96FN5 646 aa8.79□□□□□ -1
SPTAN1-213ENST00000627809 ASIC4Q96FT7 647 aa8.79□□□□□ -1
SPTAN1-213ENST00000627809 BICD1Q96G01 975 aa8.79□□□□□ -1
SPTAN1-213ENST00000627809 BORCS6Q96GS4 357 aa8.79□□□□□ -1
SPTAN1-213ENST00000627809 ACAP3Q96P50 834 aa8.79□□□□□ -1
SPTAN1-213ENST00000627809 CDCA3Q99618 268 aaPredicted RBP8.79□□□□□ -1
SPTAN1-213ENST00000627809 ADPGKQ9BRR6 497 aa8.79□□□□□ -1
SPTAN1-213ENST00000627809 MSTO1Q9BUK6 570 aa8.79□□□□□ -1
SPTAN1-213ENST00000627809 MRPL17Q9NRX2 175 aaKnown RBP8.79□□□□□ -1
SPTAN1-213ENST00000627809 KANSL3Q9P2N6 904 aa8.79□□□□□ -1
SPTAN1-213ENST00000627809 MTRRQ9UBK8 725 aa8.79□□□□□ -1
SPTAN1-213ENST00000627809 LIMD1Q9UGP4 676 aa8.79□□□□□ -1
SPTAN1-213ENST00000627809 SIX4Q9UIU6 781 aa8.79□□□□□ -1
SPTAN1-213ENST00000627809 STYXL1Q9Y6J8 313 aa8.79□□□□□ -1
SPTAN1-213ENST00000627809 CACNA1HO95180 2353 aa8.79□□□□□ -1
SPTAN1-213ENST00000627809 SF3B1O75533 1304 aaKnown RBP eCLIP8.79□□□□□ -1
SPTAN1-213ENST00000627809 WDR87Q6ZQQ6 2873 aa8.78□□□□□ -1
SPTAN1-213ENST00000627809 CCDC195A0A1B0GUA6 201 aa8.78□□□□□ -1
SPTAN1-213ENST00000627809 TMEM189-UBE2V1I3L0A0 370 aa8.78□□□□□ -1
SPTAN1-213ENST00000627809 CLIC2O15247 247 aa8.78□□□□□ -1
SPTAN1-213ENST00000627809 OGTO15294 1046 aa8.78□□□□□ -1
SPTAN1-213ENST00000627809 CLDN3O15551 220 aa8.78□□□□□ -1
SPTAN1-213ENST00000627809 LRRN2O75325 713 aa8.78□□□□□ -1
SPTAN1-213ENST00000627809 SMC2O95347 1197 aa8.78□□□□□ -1
SPTAN1-213ENST00000627809 GCNT3O95395 438 aa8.78□□□□□ -1
SPTAN1-213ENST00000627809 RPN1P04843 607 aaKnown RBP8.78□□□□□ -1
SPTAN1-213ENST00000627809 GJA1P17302 382 aa8.78□□□□□ -1
SPTAN1-213ENST00000627809 HOXC13P31276 330 aa8.78□□□□□ -1
SPTAN1-213ENST00000627809 CASP4P49662 377 aa8.78□□□□□ -1
SPTAN1-213ENST00000627809 NCBP1Q09161 790 aaKnown RBP8.78□□□□□ -1
SPTAN1-213ENST00000627809 DPYDQ12882 1025 aa8.78□□□□□ -1
SPTAN1-213ENST00000627809 PSMD2Q13200 908 aa8.78□□□□□ -1
SPTAN1-213ENST00000627809 MRPL58Q14197 206 aaKnown RBP8.78□□□□□ -1
SPTAN1-213ENST00000627809 USP41Q3LFD5 358 aa8.78□□□□□ -1
SPTAN1-213ENST00000627809 PDE12Q6L8Q7 609 aaKnown RBP8.78□□□□□ -1
SPTAN1-213ENST00000627809 NELFCDQ8IXH7 590 aa8.78□□□□□ -1
SPTAN1-213ENST00000627809 HS6ST3Q8IZP7 471 aa8.78□□□□□ -1
SPTAN1-213ENST00000627809 KIAA0895Q8NCT3 520 aa8.78□□□□□ -1
SPTAN1-213ENST00000627809 KREMEN2Q8NCW0 462 aa8.78□□□□□ -1
SPTAN1-213ENST00000627809 OR5B17Q8NGF7 314 aa8.78□□□□□ -1
SPTAN1-213ENST00000627809 SLC7A14Q8TBB6 771 aa8.78□□□□□ -1
SPTAN1-213ENST00000627809 SCFD1Q8WVM8 642 aa8.78□□□□□ -1
SPTAN1-213ENST00000627809 PGLYRP2Q96PD5 576 aa8.78□□□□□ -1
SPTAN1-213ENST00000627809 POP1Q99575 1024 aaKnown RBP8.78□□□□□ -1
SPTAN1-213ENST00000627809 TTPALQ9BTX7 342 aa8.78□□□□□ -1
SPTAN1-213ENST00000627809 CCDC94Q9BW85 323 aaPredicted RBP8.78□□□□□ -1
SPTAN1-213ENST00000627809 COLEC11Q9BWP8 271 aa8.78□□□□□ -1
SPTAN1-213ENST00000627809 RHOBTB2Q9BYZ6 727 aa8.78□□□□□ -1
SPTAN1-213ENST00000627809 MRPL44Q9H9J2 332 aaKnown RBP8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms