RNA–Protein interactions for RNA: ENST00000622629.4

MSH6-215, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 4,324 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-215ENST00000622629 C4orf19Q8IY42 314 aa13.59□□□□□ -0.23
MSH6-215ENST00000622629 MSL3Q8N5Y2 521 aaKnown RBP13.59□□□□□ -0.23
MSH6-215ENST00000622629 SPATA33Q96N06 139 aa13.59□□□□□ -0.23
MSH6-215ENST00000622629 KLF6Q99612 283 aaPredicted RBP13.59□□□□□ -0.23
MSH6-215ENST00000622629 RASSF10A6NK89 507 aa13.59□□□□□ -0.23
MSH6-215ENST00000622629 MAGEA4P43358 317 aa13.59□□□□□ -0.23
MSH6-215ENST00000622629 RPL21P46778 160 aaKnown RBP13.59□□□□□ -0.23
MSH6-215ENST00000622629 GMPSP49915 693 aaPredicted RBP13.59□□□□□ -0.23
MSH6-215ENST00000622629 MYO1EQ12965 1108 aa13.59□□□□□ -0.23
MSH6-215ENST00000622629 CYP4A22Q5TCH4 519 aa13.59□□□□□ -0.23
MSH6-215ENST00000622629 GPAT2Q6NUI2 795 aa13.59□□□□□ -0.23
MSH6-215ENST00000622629 IL31RAQ8NI17 732 aa13.59□□□□□ -0.23
MSH6-215ENST00000622629 CDC42EP4Q9H3Q1 356 aaKnown RBP13.59□□□□□ -0.23
MSH6-215ENST00000622629 SLC38A10Q9HBR0 1119 aa13.59□□□□□ -0.23
MSH6-215ENST00000622629 RARAP10276 462 aa13.58□□□□□ -0.23
MSH6-215ENST00000622629 RARGP13631 454 aa13.58□□□□□ -0.23
MSH6-215ENST00000622629 C1orf228Q6PIY5 440 aa13.58□□□□□ -0.23
MSH6-215ENST00000622629 PDCD7Q8N8D1 485 aaKnown RBP13.58□□□□□ -0.23
MSH6-215ENST00000622629 C1orf131Q8NDD1 294 aaKnown RBP13.58□□□□□ -0.23
MSH6-215ENST00000622629 PARD3BQ8TEW8 1205 aa13.58□□□□□ -0.23
MSH6-215ENST00000622629 PPP4R1Q8TF05 950 aa13.58□□□□□ -0.23
MSH6-215ENST00000622629 USP15Q9Y4E8 981 aaPredicted RBP13.58□□□□□ -0.23
MSH6-215ENST00000622629 PHRF1Q9P1Y6 1649 aaKnown RBP13.58□□□□□ -0.24
MSH6-215ENST00000622629 IFI35P80217 286 aaPredicted RBP13.58□□□□□ -0.24
MSH6-215ENST00000622629 TFDP2Q14188 446 aa13.58□□□□□ -0.24
MSH6-215ENST00000622629 PCNX4Q63HM2 1172 aa13.58□□□□□ -0.24
MSH6-215ENST00000622629 TRPM8Q7Z2W7 1104 aa13.58□□□□□ -0.24
MSH6-215ENST00000622629 EXOC8Q8IYI6 725 aa13.58□□□□□ -0.24
MSH6-215ENST00000622629 KIF2BQ8N4N8 673 aa13.58□□□□□ -0.24
MSH6-215ENST00000622629 CDKL2Q92772 493 aa13.58□□□□□ -0.24
MSH6-215ENST00000622629 TMEM51Q9NW97 253 aa13.58□□□□□ -0.24
MSH6-215ENST00000622629 IQANK1A0A1B0GTG1 560 aa13.58□□□□□ -0.24
MSH6-215ENST00000622629 CCT8L1PA6NM43 557 aa13.58□□□□□ -0.24
MSH6-215ENST00000622629 ANKRD63C9JTQ0 380 aa13.58□□□□□ -0.24
MSH6-215ENST00000622629 TXNDC9O14530 226 aa13.58□□□□□ -0.24
MSH6-215ENST00000622629 MAFGO15525 162 aa13.58□□□□□ -0.24
MSH6-215ENST00000622629 TOM1L1O75674 476 aa13.58□□□□□ -0.24
MSH6-215ENST00000622629 GRAP2O75791 330 aa13.58□□□□□ -0.24
MSH6-215ENST00000622629 FEZF2Q8TBJ5 459 aa13.58□□□□□ -0.24
MSH6-215ENST00000622629 VAV3Q9UKW4 847 aa13.58□□□□□ -0.24
MSH6-215ENST00000622629 ALS2Q96Q42 1657 aa13.58□□□□□ -0.24
MSH6-215ENST00000622629 ABCC6O95255 1503 aa13.58□□□□□ -0.24
MSH6-215ENST00000622629 SNRPFP62306 86 aaKnown RBP13.58□□□□□ -0.24
MSH6-215ENST00000622629 CYP24A1Q07973 514 aa13.58□□□□□ -0.24
MSH6-215ENST00000622629 NR1H3Q13133 447 aa13.58□□□□□ -0.24
MSH6-215ENST00000622629 CUL2Q13617 745 aa13.58□□□□□ -0.24
MSH6-215ENST00000622629 MYBPC2Q14324 1141 aa13.58□□□□□ -0.24
MSH6-215ENST00000622629 GEN1Q17RS7 908 aa13.58□□□□□ -0.24
MSH6-215ENST00000622629 FAM47CQ5HY64 1035 aa13.58□□□□□ -0.24
MSH6-215ENST00000622629 NBPF12Q5TAG4 269 aaPredicted RBP13.58□□□□□ -0.24
MSH6-215ENST00000622629 RCOR2Q8IZ40 523 aa13.58□□□□□ -0.24
MSH6-215ENST00000622629 AGBL3Q8NEM8 1001 aa13.58□□□□□ -0.24
MSH6-215ENST00000622629 KCNV2Q8TDN2 545 aa13.58□□□□□ -0.24
MSH6-215ENST00000622629 SEPT1Q8WYJ6 367 aa13.58□□□□□ -0.24
MSH6-215ENST00000622629 AKT1S1Q96B36 256 aa13.58□□□□□ -0.24
MSH6-215ENST00000622629 CAMKK2Q96RR4 588 aa13.58□□□□□ -0.24
MSH6-215ENST00000622629 DNAJC18Q9H819 358 aa13.58□□□□□ -0.24
MSH6-215ENST00000622629 ASNSD1Q9NWL6 643 aa13.58□□□□□ -0.24
MSH6-215ENST00000622629 ARL4AP40617 200 aa13.57□□□□□ -0.24
MSH6-215ENST00000622629 EFNA5P52803 228 aa13.57□□□□□ -0.24
MSH6-215ENST00000622629 PGM5Q15124 567 aa13.57□□□□□ -0.24
MSH6-215ENST00000622629 IQCKQ8N0W5 287 aa13.57□□□□□ -0.24
MSH6-215ENST00000622629 DNAAF3Q8N9W5 541 aa13.57□□□□□ -0.24
MSH6-215ENST00000622629 ATP11CQ8NB49 1132 aa13.57□□□□□ -0.24
MSH6-215ENST00000622629 EPS8L1Q8TE68 723 aa13.57□□□□□ -0.24
MSH6-215ENST00000622629 LBHD1Q9BQE6 289 aaPredicted RBP13.57□□□□□ -0.24
MSH6-215ENST00000622629 SLC40A1Q9NP59 571 aa13.57□□□□□ -0.24
MSH6-215ENST00000622629 PXMP2Q9NR77 195 aa13.57□□□□□ -0.24
MSH6-215ENST00000622629 HACL1Q9UJ83 578 aa13.57□□□□□ -0.24
MSH6-215ENST00000622629 CES2O00748 559 aa13.57□□□□□ -0.24
MSH6-215ENST00000622629 CST8O60676 142 aa13.57□□□□□ -0.24
MSH6-215ENST00000622629 ESRRAP11474 423 aaPredicted RBP13.57□□□□□ -0.24
MSH6-215ENST00000622629 PEX19P40855 299 aa13.57□□□□□ -0.24
MSH6-215ENST00000622629 MARSP56192 900 aaKnown RBP13.57□□□□□ -0.24
MSH6-215ENST00000622629 BCAR1P56945 870 aa13.57□□□□□ -0.24
MSH6-215ENST00000622629 EIF3EP60228 445 aaKnown RBP13.57□□□□□ -0.24
MSH6-215ENST00000622629 NFX1Q12986 1120 aaKnown RBP13.57□□□□□ -0.24
MSH6-215ENST00000622629 CATSPER4Q7RTX7 472 aa13.57□□□□□ -0.24
MSH6-215ENST00000622629 SNX25Q9H3E2 840 aa13.57□□□□□ -0.24
MSH6-215ENST00000622629 ARL2BPQ9Y2Y0 163 aa13.57□□□□□ -0.24
MSH6-215ENST00000622629 EIF4E1BA6NMX2 242 aaKnown RBP13.57□□□□□ -0.24
MSH6-215ENST00000622629 WNT10BO00744 389 aa13.57□□□□□ -0.24
MSH6-215ENST00000622629 COPEO14579 308 aa13.57□□□□□ -0.24
MSH6-215ENST00000622629 CLK2P49760 499 aaKnown RBP13.57□□□□□ -0.24
MSH6-215ENST00000622629 TMPRSS15P98073 1019 aa13.57□□□□□ -0.24
MSH6-215ENST00000622629 ORC1Q13415 861 aa13.57□□□□□ -0.24
MSH6-215ENST00000622629 SYDE1Q6ZW31 735 aaPredicted RBP13.57□□□□□ -0.24
MSH6-215ENST00000622629 ALG3Q92685 438 aa13.57□□□□□ -0.24
MSH6-215ENST00000622629 GPRASP2Q96D09 838 aa13.57□□□□□ -0.24
MSH6-215ENST00000622629 TRIM55Q9BYV6 548 aa13.57□□□□□ -0.24
MSH6-215ENST00000622629 SLC13A1Q9BZW2 595 aa13.57□□□□□ -0.24
MSH6-215ENST00000622629 C17orf75Q9HAS0 396 aa13.57□□□□□ -0.24
MSH6-215ENST00000622629 TRPM3Q9HCF6 1732 aaPredicted RBP13.57□□□□□ -0.24
MSH6-215ENST00000622629 KRT37O76014 449 aa13.56□□□□□ -0.24
MSH6-215ENST00000622629 IREB2P48200 963 aaKnown RBP13.56□□□□□ -0.24
MSH6-215ENST00000622629 RGS7P49802 495 aa13.56□□□□□ -0.24
MSH6-215ENST00000622629 SKOR1P84550 965 aa13.56□□□□□ -0.24
MSH6-215ENST00000622629 C11orf63Q6NUN7 778 aa13.56□□□□□ -0.24
MSH6-215ENST00000622629 TATDN1Q6P1N9 297 aa13.56□□□□□ -0.24
MSH6-215ENST00000622629 ROPN1BQ9BZX4 212 aaPredicted RBP13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms