RNA–Protein interactions for RNA: ENST00000622183.1

CPNE3-213, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 156 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-213ENST00000622183 BMT2Q1RMZ1 405 aa6□□□□□ -1.45
CPNE3-213ENST00000622183 ANKS6Q68DC2 871 aa6□□□□□ -1.45
CPNE3-213ENST00000622183 FAM111BQ6SJ93 734 aa6□□□□□ -1.45
CPNE3-213ENST00000622183 ZNF783Q6ZMS7 281 aa6□□□□□ -1.45
CPNE3-213ENST00000622183 ZNF365Q70YC5 407 aa6□□□□□ -1.45
CPNE3-213ENST00000622183 DOK3Q7L591 496 aa6□□□□□ -1.45
CPNE3-213ENST00000622183 PDSS2Q86YH6 399 aa6□□□□□ -1.45
CPNE3-213ENST00000622183 LGI4Q8N135 537 aa6□□□□□ -1.45
CPNE3-213ENST00000622183 RNF152Q8N8N0 203 aa6□□□□□ -1.45
CPNE3-213ENST00000622183 POF1BQ8WVV4 589 aa6□□□□□ -1.45
CPNE3-213ENST00000622183 TRIM43Q96BQ3 446 aaPredicted RBP6□□□□□ -1.45
CPNE3-213ENST00000622183 WDR12Q9GZL7 423 aaKnown RBP6□□□□□ -1.45
CPNE3-213ENST00000622183 EPC1Q9H2F5 836 aa6□□□□□ -1.45
CPNE3-213ENST00000622183 BRD9Q9H8M2 597 aa6□□□□□ -1.45
CPNE3-213ENST00000622183 PPCSQ9HAB8 311 aa6□□□□□ -1.45
CPNE3-213ENST00000622183 SLAMF7Q9NQ25 335 aa6□□□□□ -1.45
CPNE3-213ENST00000622183 COL20A1Q9P218 1284 aa6□□□□□ -1.45
CPNE3-213ENST00000622183 LRCH1Q9Y2L9 728 aa6□□□□□ -1.45
CPNE3-213ENST00000622183 RNF114Q9Y508 228 aa6□□□□□ -1.45
CPNE3-213ENST00000622183 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6□□□□□ -1.45
CPNE3-213ENST00000622183 TBKBP1A7MCY6 615 aa5.99□□□□□ -1.45
CPNE3-213ENST00000622183 BTN3A1O00481 513 aa5.99□□□□□ -1.45
CPNE3-213ENST00000622183 FGF18O76093 207 aa5.99□□□□□ -1.45
CPNE3-213ENST00000622183 ABHD16AO95870 558 aa5.99□□□□□ -1.45
CPNE3-213ENST00000622183 ANXA1P04083 346 aa5.99□□□□□ -1.45
CPNE3-213ENST00000622183 PARP1P09874 1014 aaKnown RBP5.99□□□□□ -1.45
CPNE3-213ENST00000622183 PPM1AP35813 382 aa5.99□□□□□ -1.45
CPNE3-213ENST00000622183 KCNJ5P48544 419 aa5.99□□□□□ -1.45
CPNE3-213ENST00000622183 KCNC1P48547 511 aa5.99□□□□□ -1.45
CPNE3-213ENST00000622183 DUSP8Q13202 625 aa5.99□□□□□ -1.45
CPNE3-213ENST00000622183 INO80DQ53TQ3 878 aaPredicted RBP5.99□□□□□ -1.45
CPNE3-213ENST00000622183 GPRIN1Q7Z2K8 1008 aa5.99□□□□□ -1.45
CPNE3-213ENST00000622183 UBE3BQ7Z3V4 1068 aa5.99□□□□□ -1.45
CPNE3-213ENST00000622183 MYLK4Q86YV6 388 aaPredicted RBP5.99□□□□□ -1.45
CPNE3-213ENST00000622183 LIX1LQ8IVB5 337 aa5.99□□□□□ -1.45
CPNE3-213ENST00000622183 MAML1Q92585 1016 aa5.99□□□□□ -1.45
CPNE3-213ENST00000622183 KIAA1191Q96A73 305 aa5.99□□□□□ -1.45
CPNE3-213ENST00000622183 ZNF512Q96ME7 567 aaPredicted RBP5.99□□□□□ -1.45
CPNE3-213ENST00000622183 LMF1Q96S06 567 aa5.99□□□□□ -1.45
CPNE3-213ENST00000622183 CRB3Q9BUF7 120 aa5.99□□□□□ -1.45
CPNE3-213ENST00000622183 BRIP1Q9BX63 1249 aa5.99□□□□□ -1.45
CPNE3-213ENST00000622183 VPS11Q9H270 941 aa5.99□□□□□ -1.45
CPNE3-213ENST00000622183 SMURF2Q9HAU4 748 aa5.99□□□□□ -1.45
CPNE3-213ENST00000622183 SACM1LQ9NTJ5 587 aa5.99□□□□□ -1.45
CPNE3-213ENST00000622183 SRRDQ9UH36 339 aa5.99□□□□□ -1.45
CPNE3-213ENST00000622183 PAXBP1Q9Y5B6 917 aa5.99□□□□□ -1.45
CPNE3-213ENST00000622183 A0A1W2PPC4 97 aa5.98□□□□□ -1.45
CPNE3-213ENST00000622183 CDC14BO60729 498 aa5.98□□□□□ -1.45
CPNE3-213ENST00000622183 POMCP01189 267 aa5.98□□□□□ -1.45
CPNE3-213ENST00000622183 THP07101 528 aa5.98□□□□□ -1.45
CPNE3-213ENST00000622183 ABCB4P21439 1286 aa5.98□□□□□ -1.45
CPNE3-213ENST00000622183 IL6STP40189 918 aaPredicted RBP5.98□□□□□ -1.45
CPNE3-213ENST00000622183 PHKA1P46020 1223 aa5.98□□□□□ -1.45
CPNE3-213ENST00000622183 EPHB4P54760 987 aa5.98□□□□□ -1.45
CPNE3-213ENST00000622183 PPP2CBP62714 309 aa5.98□□□□□ -1.45
CPNE3-213ENST00000622183 PPP2CAP67775 309 aa5.98□□□□□ -1.45
CPNE3-213ENST00000622183 HTRA4P83105 476 aaPredicted RBP5.98□□□□□ -1.45
CPNE3-213ENST00000622183 SLC13A2Q13183 592 aa5.98□□□□□ -1.45
CPNE3-213ENST00000622183 PKN1Q16512 942 aa5.98□□□□□ -1.45
CPNE3-213ENST00000622183 C3orf38Q5JPI3 329 aa5.98□□□□□ -1.45
CPNE3-213ENST00000622183 FKBP15Q5T1M5 1219 aa5.98□□□□□ -1.45
CPNE3-213ENST00000622183 MFSD5Q6N075 450 aa5.98□□□□□ -1.45
CPNE3-213ENST00000622183 HIBCHQ6NVY1 386 aaPredicted RBP5.98□□□□□ -1.45
CPNE3-213ENST00000622183 ARHGEF18Q6ZSZ5 1173 aa5.98□□□□□ -1.45
CPNE3-213ENST00000622183 APBB1IPQ7Z5R6 666 aaPredicted RBP5.98□□□□□ -1.45
CPNE3-213ENST00000622183 CCDC33Q8N5R6 958 aa5.98□□□□□ -1.45
CPNE3-213ENST00000622183 AOPEPQ8N6M6 819 aa5.98□□□□□ -1.45
CPNE3-213ENST00000622183 OR10H5Q8NGA6 315 aa5.98□□□□□ -1.45
CPNE3-213ENST00000622183 ZFP28Q8NHY6 868 aa5.98□□□□□ -1.45
CPNE3-213ENST00000622183 LRRC37BQ96QE4 947 aa5.98□□□□□ -1.45
CPNE3-213ENST00000622183 LSM14BQ9BX40 385 aaKnown RBP5.98□□□□□ -1.45
CPNE3-213ENST00000622183 PLA2G12BQ9BX93 195 aa5.98□□□□□ -1.45
CPNE3-213ENST00000622183 GPR35Q9HC97 309 aa5.98□□□□□ -1.45
CPNE3-213ENST00000622183 APOL1O14791 398 aa5.97□□□□□ -1.45
CPNE3-213ENST00000622183 TBC1D4O60343 1298 aa5.97□□□□□ -1.45
CPNE3-213ENST00000622183 GNAI2P04899 355 aa5.97□□□□□ -1.45
CPNE3-213ENST00000622183 RPS19P39019 145 aaKnown RBP5.97□□□□□ -1.45
CPNE3-213ENST00000622183 RAP2BP61225 183 aa5.97□□□□□ -1.45
CPNE3-213ENST00000622183 RPS16P62249 146 aaKnown RBP5.97□□□□□ -1.45
CPNE3-213ENST00000622183 TNFAIP2Q03169 654 aa5.97□□□□□ -1.45
CPNE3-213ENST00000622183 PMS2P11Q13670 270 aa5.97□□□□□ -1.45
CPNE3-213ENST00000622183 UBXN2BQ14CS0 331 aa5.97□□□□□ -1.45
CPNE3-213ENST00000622183 SURF1Q15526 300 aa5.97□□□□□ -1.45
CPNE3-213ENST00000622183 SLC44A4Q53GD3 710 aa5.97□□□□□ -1.45
CPNE3-213ENST00000622183 ATXN7L2Q5T6C5 722 aaPredicted RBP5.97□□□□□ -1.45
CPNE3-213ENST00000622183 NT5DC1Q5TFE4 455 aa5.97□□□□□ -1.45
CPNE3-213ENST00000622183 ANO1Q5XXA6 986 aa5.97□□□□□ -1.45
CPNE3-213ENST00000622183 FAM83AQ86UY5 434 aa5.97□□□□□ -1.45
CPNE3-213ENST00000622183 MICU3Q86XE3 530 aa5.97□□□□□ -1.45
CPNE3-213ENST00000622183 ATP11CQ8NB49 1132 aa5.97□□□□□ -1.45
CPNE3-213ENST00000622183 GIMAP8Q8ND71 665 aaPredicted RBP5.97□□□□□ -1.45
CPNE3-213ENST00000622183 TFAP2CQ92754 450 aa5.97□□□□□ -1.45
CPNE3-213ENST00000622183 DDX17Q92841 729 aaKnown RBP5.97□□□□□ -1.45
CPNE3-213ENST00000622183 ZNF518BQ9C0D4 1074 aa5.97□□□□□ -1.45
CPNE3-213ENST00000622183 MEGF9Q9H1U4 602 aa5.97□□□□□ -1.45
CPNE3-213ENST00000622183 GSTO2Q9H4Y5 243 aa5.97□□□□□ -1.45
CPNE3-213ENST00000622183 FBXO34Q9NWN3 711 aa5.97□□□□□ -1.45
CPNE3-213ENST00000622183 SLC45A2Q9UMX9 530 aa5.97□□□□□ -1.45
CPNE3-213ENST00000622183 HDAC5Q9UQL6 1122 aa5.97□□□□□ -1.45
CPNE3-213ENST00000622183 PRR5-ARHGAP8B1AHC4 643 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms