RNA–Protein interactions for RNA: ENST00000621325.1

LIME1-210, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 2,410 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-210ENST00000621325 ZNF677Q86XU0 584 aa22.74■■□□□ 1.23
LIME1-210ENST00000621325 TMEM192Q8IY95 271 aa22.74■■□□□ 1.23
LIME1-210ENST00000621325 TMEM130Q8N3G9 435 aa22.74■■□□□ 1.23
LIME1-210ENST00000621325 PLXNA1Q9UIW2 1896 aa22.74■■□□□ 1.23
LIME1-210ENST00000621325 ASS1P00966 412 aaKnown RBP22.73■■□□□ 1.23
LIME1-210ENST00000621325 GH1P01241 217 aa22.73■■□□□ 1.23
LIME1-210ENST00000621325 HOXC6P09630 235 aa22.73■■□□□ 1.23
LIME1-210ENST00000621325 GNA15P30679 374 aa22.73■■□□□ 1.23
LIME1-210ENST00000621325 TFAMQ00059 246 aaKnown RBP22.73■■□□□ 1.23
LIME1-210ENST00000621325 TMEM132AQ24JP5 1023 aa22.73■■□□□ 1.23
LIME1-210ENST00000621325 EFCAB13Q8IY85 973 aa22.73■■□□□ 1.23
LIME1-210ENST00000621325 ZDHHC14Q8IZN3 488 aa22.73■■□□□ 1.23
LIME1-210ENST00000621325 SLITRK6Q9H5Y7 841 aa22.73■■□□□ 1.23
LIME1-210ENST00000621325 IFT122Q9HBG6 1241 aa22.73■■□□□ 1.23
LIME1-210ENST00000621325 PLXNB2O15031 1838 aa22.73■■□□□ 1.23
LIME1-210ENST00000621325 BHMG1C9JSJ3 638 aaPredicted RBP22.73■■□□□ 1.23
LIME1-210ENST00000621325 ECM2O94769 699 aaPredicted RBP22.73■■□□□ 1.23
LIME1-210ENST00000621325 PYGMP11217 842 aa22.73■■□□□ 1.23
LIME1-210ENST00000621325 NEUROG2Q9H2A3 272 aa22.73■■□□□ 1.23
LIME1-210ENST00000621325 VTA1Q9NP79 307 aa22.73■■□□□ 1.23
LIME1-210ENST00000621325 ANAPC7Q9UJX3 599 aa22.73■■□□□ 1.23
LIME1-210ENST00000621325 IVNS1ABPQ9Y6Y0 642 aa22.73■■□□□ 1.23
LIME1-210ENST00000621325 TBXAS1P24557 533 aaPredicted RBP22.72■■□□□ 1.23
LIME1-210ENST00000621325 HLTFQ14527 1009 aaKnown RBP eCLIP22.72■■□□□ 1.23
LIME1-210ENST00000621325 WNT8AQ9H1J5 351 aa22.72■■□□□ 1.23
LIME1-210ENST00000621325 CNTN6Q9UQ52 1028 aa22.72■■□□□ 1.23
LIME1-210ENST00000621325 MROH7Q68CQ1 1323 aa22.72■■□□□ 1.23
LIME1-210ENST00000621325 NSFP46459 744 aaKnown RBP22.72■■□□□ 1.23
LIME1-210ENST00000621325 CENPCQ03188 943 aa22.72■■□□□ 1.23
LIME1-210ENST00000621325 GRM1Q13255 1194 aa22.72■■□□□ 1.23
LIME1-210ENST00000621325 NNTQ13423 1086 aa22.72■■□□□ 1.23
LIME1-210ENST00000621325 ABRAQ8N0Z2 381 aa22.72■■□□□ 1.23
LIME1-210ENST00000621325 PTPN18Q99952 460 aa22.72■■□□□ 1.23
LIME1-210ENST00000621325 TRIM51Q9BSJ1 452 aa22.72■■□□□ 1.23
LIME1-210ENST00000621325 IMPG2Q9BZV3 1241 aa22.72■■□□□ 1.23
LIME1-210ENST00000621325 CDT1Q9H211 546 aa22.72■■□□□ 1.23
LIME1-210ENST00000621325 MORF4L1Q9UBU8 362 aa22.72■■□□□ 1.23
LIME1-210ENST00000621325 SLC45A1Q9Y2W3 748 aa22.72■■□□□ 1.23
LIME1-210ENST00000621325 TCRBV7S2A1N4TA0A589 114 aa22.71■■□□□ 1.23
LIME1-210ENST00000621325 DAPK3O43293 454 aa22.71■■□□□ 1.23
LIME1-210ENST00000621325 CD58P19256 250 aa22.71■■□□□ 1.23
LIME1-210ENST00000621325 CTNNA1P35221 906 aaKnown RBP22.71■■□□□ 1.23
LIME1-210ENST00000621325 DUOXA2Q1HG44 320 aa22.71■■□□□ 1.23
LIME1-210ENST00000621325 MON1BQ7L1V2 547 aa22.71■■□□□ 1.23
LIME1-210ENST00000621325 GPR142Q7Z601 462 aa22.71■■□□□ 1.23
LIME1-210ENST00000621325 UBR7Q8N806 425 aa22.71■■□□□ 1.23
LIME1-210ENST00000621325 PPTC7Q8NI37 304 aa22.71■■□□□ 1.23
LIME1-210ENST00000621325 C11orf70Q9BRQ4 267 aa22.71■■□□□ 1.23
LIME1-210ENST00000621325 A0A087WZ62 844 aa22.71■■□□□ 1.23
LIME1-210ENST00000621325 THAP12O43422 761 aa22.71■■□□□ 1.23
LIME1-210ENST00000621325 AP3M2P53677 418 aa22.71■■□□□ 1.23
LIME1-210ENST00000621325 NOMO3P69849 1222 aa22.71■■□□□ 1.23
LIME1-210ENST00000621325 LLGL1Q15334 1064 aa22.71■■□□□ 1.23
LIME1-210ENST00000621325 ZNF484Q5JVG2 852 aa22.71■■□□□ 1.23
LIME1-210ENST00000621325 ANKRD23Q86SG2 305 aa22.71■■□□□ 1.23
LIME1-210ENST00000621325 DPP9Q86TI2 863 aa22.71■■□□□ 1.23
LIME1-210ENST00000621325 CCDC26Q8TAB7 109 aa22.71■■□□□ 1.23
LIME1-210ENST00000621325 FDXACB1Q9BRP7 624 aaPredicted RBP22.71■■□□□ 1.23
LIME1-210ENST00000621325 C16orf70Q9BSU1 422 aa22.71■■□□□ 1.23
LIME1-210ENST00000621325 GBA2Q9HCG7 927 aaPredicted RBP22.71■■□□□ 1.23
LIME1-210ENST00000621325 CEP83Q9Y592 693 aa22.71■■□□□ 1.23
LIME1-210ENST00000621325 PCDHA3Q9Y5H8 950 aa22.71■■□□□ 1.23
LIME1-210ENST00000621325 RBM47A0AV96 593 aaKnown RBP22.7■■□□□ 1.22
LIME1-210ENST00000621325 GPR25O00155 361 aa22.7■■□□□ 1.22
LIME1-210ENST00000621325 VTNP04004 478 aa22.7■■□□□ 1.22
LIME1-210ENST00000621325 CXCL8P10145 99 aa22.7■■□□□ 1.22
LIME1-210ENST00000621325 MAPK4P31152 587 aa22.7■■□□□ 1.22
LIME1-210ENST00000621325 NAP1L3Q99457 506 aaPredicted RBP22.7■■□□□ 1.22
LIME1-210ENST00000621325 FAM204AQ9H8W3 233 aa22.7■■□□□ 1.22
LIME1-210ENST00000621325 STRNO43815 780 aa22.7■■□□□ 1.22
LIME1-210ENST00000621325 GCLCP48506 637 aaPredicted RBP22.7■■□□□ 1.22
LIME1-210ENST00000621325 ZNF132P52740 706 aa22.7■■□□□ 1.22
LIME1-210ENST00000621325 ZNF394Q53GI3 561 aa22.7■■□□□ 1.22
LIME1-210ENST00000621325 DAB2IPQ5VWQ8 1189 aa22.7■■□□□ 1.22
LIME1-210ENST00000621325 MAATS1Q7Z4T9 603 aa22.7■■□□□ 1.22
LIME1-210ENST00000621325 DPH5Q9H2P9 285 aa22.7■■□□□ 1.22
LIME1-210ENST00000621325 AVENQ9NQS1 362 aaPredicted RBP22.7■■□□□ 1.22
LIME1-210ENST00000621325 ASAP2O43150 1006 aa22.69■■□□□ 1.22
LIME1-210ENST00000621325 WEE2P0C1S8 567 aa22.69■■□□□ 1.22
LIME1-210ENST00000621325 SCARA5Q6ZMJ2 495 aa22.69■■□□□ 1.22
LIME1-210ENST00000621325 LINC01465Q8N7H1 131 aa22.69■■□□□ 1.22
LIME1-210ENST00000621325 PRELID2Q8N945 189 aa22.69■■□□□ 1.22
LIME1-210ENST00000621325 ZIM3Q96PE6 472 aa22.69■■□□□ 1.22
LIME1-210ENST00000621325 TRIM31Q9BZY9 425 aa22.69■■□□□ 1.22
LIME1-210ENST00000621325 AKT3Q9Y243 479 aa22.69■■□□□ 1.22
LIME1-210ENST00000621325 TNFSF13BQ9Y275 285 aa22.69■■□□□ 1.22
LIME1-210ENST00000621325 UNCXA6NJT0 531 aa22.69■■□□□ 1.22
LIME1-210ENST00000621325 MEFVO15553 781 aaPredicted RBP22.69■■□□□ 1.22
LIME1-210ENST00000621325 SMPD1P17405 629 aa22.69■■□□□ 1.22
LIME1-210ENST00000621325 CTNNA2P26232 953 aa22.69■■□□□ 1.22
LIME1-210ENST00000621325 CUL1Q13616 776 aa22.69■■□□□ 1.22
LIME1-210ENST00000621325 MMS22LQ6ZRQ5 1243 aa22.69■■□□□ 1.22
LIME1-210ENST00000621325 WHAMMQ8TF30 809 aa22.69■■□□□ 1.22
LIME1-210ENST00000621325 ZNF606Q8WXB4 792 aa22.69■■□□□ 1.22
LIME1-210ENST00000621325 C18orf8Q96DM3 657 aa22.69■■□□□ 1.22
LIME1-210ENST00000621325 GOLGA6L10A0A0M3HER8 536 aa22.68■■□□□ 1.22
LIME1-210ENST00000621325 TMEM191BP0C7N4 346 aa22.68■■□□□ 1.22
LIME1-210ENST00000621325 TRPC3Q13507 836 aa22.68■■□□□ 1.22
LIME1-210ENST00000621325 AMHR2Q16671 573 aa22.68■■□□□ 1.22
LIME1-210ENST00000621325 SPRYD7Q5W111 196 aa22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms