RNA–Protein interactions for RNA: ENST00000620465.4

MALAT1-216, metastasis associated lung adenocarcinoma transcript 1, humanhuman

TSL 2

Gene MALAT1, Length 333 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALAT1-216ENST00000620465 LEFTY2O00292 366 aa4.43□□□□□ -1.7
MALAT1-216ENST00000620465 MATN4O95460 622 aa4.43□□□□□ -1.7
MALAT1-216ENST00000620465 GNAI2P04899 355 aa4.43□□□□□ -1.7
MALAT1-216ENST00000620465 GJB1P08034 283 aa4.43□□□□□ -1.7
MALAT1-216ENST00000620465 SPATA31D3P0C874 917 aa4.43□□□□□ -1.7
MALAT1-216ENST00000620465 GCSHP23434 173 aa4.43□□□□□ -1.7
MALAT1-216ENST00000620465 ADAM17P78536 824 aa4.43□□□□□ -1.7
MALAT1-216ENST00000620465 PURAQ00577 322 aaKnown RBP4.43□□□□□ -1.7
MALAT1-216ENST00000620465 CNN3Q15417 329 aaKnown RBP4.43□□□□□ -1.7
MALAT1-216ENST00000620465 KIAA0753Q2KHM9 967 aa4.43□□□□□ -1.7
MALAT1-216ENST00000620465 FAM102AQ5T9C2 384 aaPredicted RBP4.43□□□□□ -1.7
MALAT1-216ENST00000620465 AGAP9Q5VTM2 703 aa4.43□□□□□ -1.7
MALAT1-216ENST00000620465 CYB5RLQ6IPT4 315 aa4.43□□□□□ -1.7
MALAT1-216ENST00000620465 SPATA31D4Q6ZUB0 917 aa4.43□□□□□ -1.7
MALAT1-216ENST00000620465 PDSS2Q86YH6 399 aa4.43□□□□□ -1.7
MALAT1-216ENST00000620465 TMPRSS6Q8IU80 811 aa4.43□□□□□ -1.7
MALAT1-216ENST00000620465 CCAR1Q8IX12 1150 aaKnown RBP4.43□□□□□ -1.7
MALAT1-216ENST00000620465 RHOT2Q8IXI1 618 aa4.43□□□□□ -1.7
MALAT1-216ENST00000620465 FAM43AQ8N2R8 423 aa4.43□□□□□ -1.7
MALAT1-216ENST00000620465 FAM156AQ8NDB6 213 aa4.43□□□□□ -1.7
MALAT1-216ENST00000620465 NUP133Q8WUM0 1156 aa4.43□□□□□ -1.7
MALAT1-216ENST00000620465 TNPO1Q92973 898 aaKnown RBP4.43□□□□□ -1.7
MALAT1-216ENST00000620465 BRD9Q9H8M2 597 aa4.43□□□□□ -1.7
MALAT1-216ENST00000620465 CPA4Q9UI42 421 aa4.43□□□□□ -1.7
MALAT1-216ENST00000620465 TSC22D4Q9Y3Q8 395 aa4.43□□□□□ -1.7
MALAT1-216ENST00000620465 XDHP47989 1333 aa4.43□□□□□ -1.7
MALAT1-216ENST00000620465 GRXCR1A8MXD5 290 aa4.42□□□□□ -1.7
MALAT1-216ENST00000620465 GOLIM4O00461 696 aa4.42□□□□□ -1.7
MALAT1-216ENST00000620465 PHGDHO43175 533 aaKnown RBP4.42□□□□□ -1.7
MALAT1-216ENST00000620465 FRS3O43559 492 aa4.42□□□□□ -1.7
MALAT1-216ENST00000620465 AGFG2O95081 481 aa4.42□□□□□ -1.7
MALAT1-216ENST00000620465 SCAF4O95104 1147 aaKnown RBP4.42□□□□□ -1.7
MALAT1-216ENST00000620465 AHSGP02765 367 aa4.42□□□□□ -1.7
MALAT1-216ENST00000620465 MYL1P05976 194 aa4.42□□□□□ -1.7
MALAT1-216ENST00000620465 RARBP10826 455 aa4.42□□□□□ -1.7
MALAT1-216ENST00000620465 TRIM27P14373 513 aa4.42□□□□□ -1.7
MALAT1-216ENST00000620465 RNASE9P60153 205 aaKnown RBP4.42□□□□□ -1.7
MALAT1-216ENST00000620465 TOB2Q14106 344 aaPredicted RBP4.42□□□□□ -1.7
MALAT1-216ENST00000620465 KIF22Q14807 665 aa4.42□□□□□ -1.7
MALAT1-216ENST00000620465 KHDC1LQ5JSQ8 128 aa4.42□□□□□ -1.7
MALAT1-216ENST00000620465 SPDYAQ5MJ70 313 aa4.42□□□□□ -1.7
MALAT1-216ENST00000620465 UTP14CQ5TAP6 766 aaKnown RBP4.42□□□□□ -1.7
MALAT1-216ENST00000620465 EMC10Q5UCC4 262 aa4.42□□□□□ -1.7
MALAT1-216ENST00000620465 SWSAP1Q6NVH7 229 aa4.42□□□□□ -1.7
MALAT1-216ENST00000620465 DARS2Q6PI48 645 aaKnown RBP4.42□□□□□ -1.7
MALAT1-216ENST00000620465 GDF7Q7Z4P5 450 aa4.42□□□□□ -1.7
MALAT1-216ENST00000620465 ZFPM1Q8IX07 1006 aa4.42□□□□□ -1.7
MALAT1-216ENST00000620465 CCDC146Q8IYE0 955 aa4.42□□□□□ -1.7
MALAT1-216ENST00000620465 OR56A1Q8NGH5 318 aa4.42□□□□□ -1.7
MALAT1-216ENST00000620465 NT5C1BQ96P26 610 aa4.42□□□□□ -1.7
MALAT1-216ENST00000620465 NEU1Q99519 415 aa4.42□□□□□ -1.7
MALAT1-216ENST00000620465 SARGQ9BW04 601 aa4.42□□□□□ -1.7
MALAT1-216ENST00000620465 RNPEPQ9H4A4 650 aa4.42□□□□□ -1.7
MALAT1-216ENST00000620465 ZMAT3Q9HA38 289 aaKnown RBP4.42□□□□□ -1.7
MALAT1-216ENST00000620465 DDX21Q9NR30 783 aaKnown RBP eCLIP4.42□□□□□ -1.7
MALAT1-216ENST00000620465 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.42□□□□□ -1.7
MALAT1-216ENST00000620465 PIH1D1Q9NWS0 290 aaKnown RBP4.42□□□□□ -1.7
MALAT1-216ENST00000620465 PARPBPQ9NWS1 579 aa4.42□□□□□ -1.7
MALAT1-216ENST00000620465 TRPM5Q9NZQ8 1165 aa4.42□□□□□ -1.7
MALAT1-216ENST00000620465 PCDHA6Q9UN73 950 aa4.42□□□□□ -1.7
MALAT1-216ENST00000620465 SORCS3Q9UPU3 1222 aa4.42□□□□□ -1.7
MALAT1-216ENST00000620465 ATP11BQ9Y2G3 1177 aa4.42□□□□□ -1.7
MALAT1-216ENST00000620465 CHST2Q9Y4C5 530 aa4.42□□□□□ -1.7
MALAT1-216ENST00000620465 USP15Q9Y4E8 981 aaPredicted RBP4.42□□□□□ -1.7
MALAT1-216ENST00000620465 CFAP69A5D8W1 941 aa4.41□□□□□ -1.7
MALAT1-216ENST00000620465 ZNF785A8K8V0 405 aa4.41□□□□□ -1.7
MALAT1-216ENST00000620465 MGEA5O60502 916 aa4.41□□□□□ -1.7
MALAT1-216ENST00000620465 CHEK2O96017 543 aa4.41□□□□□ -1.7
MALAT1-216ENST00000620465 CKBP12277 381 aa4.41□□□□□ -1.7
MALAT1-216ENST00000620465 FCER1AP12319 257 aa4.41□□□□□ -1.7
MALAT1-216ENST00000620465 PEX2P28328 305 aa4.41□□□□□ -1.7
MALAT1-216ENST00000620465 ZNF135P52742 658 aaPredicted RBP4.41□□□□□ -1.7
MALAT1-216ENST00000620465 SOX8P57073 446 aa4.41□□□□□ -1.7
MALAT1-216ENST00000620465 PSMC1P62191 440 aaKnown RBP4.41□□□□□ -1.7
MALAT1-216ENST00000620465 NOMO3P69849 1222 aa4.41□□□□□ -1.7
MALAT1-216ENST00000620465 EXOSC9Q06265 439 aaKnown RBP4.41□□□□□ -1.7
MALAT1-216ENST00000620465 SLFN5Q08AF3 891 aa4.41□□□□□ -1.7
MALAT1-216ENST00000620465 HABP2Q14520 560 aaPredicted RBP4.41□□□□□ -1.7
MALAT1-216ENST00000620465 POLD3Q15054 466 aaPredicted RBP4.41□□□□□ -1.7
MALAT1-216ENST00000620465 CDSNQ15517 529 aa4.41□□□□□ -1.7
MALAT1-216ENST00000620465 USP39Q53GS9 565 aaKnown RBP4.41□□□□□ -1.7
MALAT1-216ENST00000620465 RABL3Q5HYI8 236 aa4.41□□□□□ -1.7
MALAT1-216ENST00000620465 NOMO2Q5JPE7 1267 aa4.41□□□□□ -1.7
MALAT1-216ENST00000620465 RNF220Q5VTB9 566 aa4.41□□□□□ -1.7
MALAT1-216ENST00000620465 TSHZ3Q63HK5 1081 aa4.41□□□□□ -1.7
MALAT1-216ENST00000620465 KSR2Q6VAB6 950 aa4.41□□□□□ -1.7
MALAT1-216ENST00000620465 RNF207Q6ZRF8 634 aa4.41□□□□□ -1.7
MALAT1-216ENST00000620465 C1orf210Q8IVY1 113 aa4.41□□□□□ -1.7
MALAT1-216ENST00000620465 CELF5Q8N6W0 485 aaKnown RBP4.41□□□□□ -1.7
MALAT1-216ENST00000620465 TMIEQ8NEW7 156 aa4.41□□□□□ -1.7
MALAT1-216ENST00000620465 CPT1CQ8TCG5 803 aa4.41□□□□□ -1.7
MALAT1-216ENST00000620465 LRTOMTQ8WZ04 291 aa4.41□□□□□ -1.7
MALAT1-216ENST00000620465 DDX17Q92841 729 aaKnown RBP4.41□□□□□ -1.7
MALAT1-216ENST00000620465 SCAMP4Q969E2 229 aa4.41□□□□□ -1.7
MALAT1-216ENST00000620465 KLHL32Q96NJ5 620 aa4.41□□□□□ -1.7
MALAT1-216ENST00000620465 C22orf23Q9BZE7 217 aa4.41□□□□□ -1.7
MALAT1-216ENST00000620465 SIK2Q9H0K1 926 aa4.41□□□□□ -1.7
MALAT1-216ENST00000620465 RSAD1Q9HA92 442 aa4.41□□□□□ -1.7
MALAT1-216ENST00000620465 ATP6V0A4Q9HBG4 840 aa4.41□□□□□ -1.7
MALAT1-216ENST00000620465 ARNT2Q9HBZ2 717 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms