RNA–Protein interactions for RNA: ENST00000616887.1

PCDHGA9-202, Transcript of protocadherin gamma subfamily A, 9, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA9, Length 2,568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9-202ENST00000616887 SHC3Q92529 594 aa12.19□□□□□ -0.46
PCDHGA9-202ENST00000616887 DDX47Q9H0S4 455 aaKnown RBP12.19□□□□□ -0.46
PCDHGA9-202ENST00000616887 EPB41L5Q9HCM4 733 aa12.19□□□□□ -0.46
PCDHGA9-202ENST00000616887 EIF4E1BA6NMX2 242 aaKnown RBP12.19□□□□□ -0.46
PCDHGA9-202ENST00000616887 DNAJC8O75937 253 aaPredicted RBP12.19□□□□□ -0.46
PCDHGA9-202ENST00000616887 UPP2O95045 317 aa12.19□□□□□ -0.46
PCDHGA9-202ENST00000616887 CYP11B1P15538 503 aa12.19□□□□□ -0.46
PCDHGA9-202ENST00000616887 TNNI1P19237 187 aa12.19□□□□□ -0.46
PCDHGA9-202ENST00000616887 ANXA13P27216 316 aa12.19□□□□□ -0.46
PCDHGA9-202ENST00000616887 ARL2P36404 184 aa12.19□□□□□ -0.46
PCDHGA9-202ENST00000616887 TNFSF9P41273 254 aa12.19□□□□□ -0.46
PCDHGA9-202ENST00000616887 BYSLQ13895 437 aaKnown RBP12.19□□□□□ -0.46
PCDHGA9-202ENST00000616887 LACTB2Q53H82 288 aaPredicted RBP12.19□□□□□ -0.46
PCDHGA9-202ENST00000616887 CDR2LQ86X02 465 aaPredicted RBP12.19□□□□□ -0.46
PCDHGA9-202ENST00000616887 SLC17A8Q8NDX2 589 aa12.19□□□□□ -0.46
PCDHGA9-202ENST00000616887 ALG3Q92685 438 aa12.19□□□□□ -0.46
PCDHGA9-202ENST00000616887 GLG1Q92896 1179 aa12.19□□□□□ -0.46
PCDHGA9-202ENST00000616887 MCM3APO60318 1980 aa12.19□□□□□ -0.46
PCDHGA9-202ENST00000616887 A0A0A6YYK5 440 aaPredicted RBP12.18□□□□□ -0.46
PCDHGA9-202ENST00000616887 HMGB1P1B2RPK0 211 aaPredicted RBP12.18□□□□□ -0.46
PCDHGA9-202ENST00000616887 KRT5P13647 590 aa12.18□□□□□ -0.46
PCDHGA9-202ENST00000616887 RFX1P22670 979 aa12.18□□□□□ -0.46
PCDHGA9-202ENST00000616887 GPC3P51654 580 aa12.18□□□□□ -0.46
PCDHGA9-202ENST00000616887 RTP1P59025 263 aa12.18□□□□□ -0.46
PCDHGA9-202ENST00000616887 SNRPFP62306 86 aaKnown RBP12.18□□□□□ -0.46
PCDHGA9-202ENST00000616887 SF3A3Q12874 501 aaKnown RBP eCLIP12.18□□□□□ -0.46
PCDHGA9-202ENST00000616887 STRN3Q13033 797 aa12.18□□□□□ -0.46
PCDHGA9-202ENST00000616887 MKRN4PQ13434 485 aaPredicted RBP12.18□□□□□ -0.46
PCDHGA9-202ENST00000616887 LLGL1Q15334 1064 aa12.18□□□□□ -0.46
PCDHGA9-202ENST00000616887 TARBP2Q15633 366 aaKnown RBP12.18□□□□□ -0.46
PCDHGA9-202ENST00000616887 TBC1D25Q3MII6 688 aa12.18□□□□□ -0.46
PCDHGA9-202ENST00000616887 GPAT2Q6NUI2 795 aa12.18□□□□□ -0.46
PCDHGA9-202ENST00000616887 SMC1BQ8NDV3 1235 aa12.18□□□□□ -0.46
PCDHGA9-202ENST00000616887 PRPF31Q8WWY3 499 aaKnown RBP12.18□□□□□ -0.46
PCDHGA9-202ENST00000616887 RUBCNQ92622 972 aa12.18□□□□□ -0.46
PCDHGA9-202ENST00000616887 KRT35Q92764 455 aa12.18□□□□□ -0.46
PCDHGA9-202ENST00000616887 NT5C1BQ96P26 610 aa12.18□□□□□ -0.46
PCDHGA9-202ENST00000616887 PPP1R16BQ96T49 567 aa12.18□□□□□ -0.46
PCDHGA9-202ENST00000616887 PRDM16Q9HAZ2 1276 aa12.18□□□□□ -0.46
PCDHGA9-202ENST00000616887 CTTNBP2NLQ9P2B4 639 aa12.18□□□□□ -0.46
PCDHGA9-202ENST00000616887 AGO2Q9UKV8 859 aaKnown RBP12.18□□□□□ -0.46
PCDHGA9-202ENST00000616887 COQ4Q9Y3A0 265 aa12.18□□□□□ -0.46
PCDHGA9-202ENST00000616887 UMODL1Q5DID0 1318 aa12.18□□□□□ -0.46
PCDHGA9-202ENST00000616887 ANKRD62A6NC57 917 aa12.18□□□□□ -0.46
PCDHGA9-202ENST00000616887 K7ERI5 159 aa12.18□□□□□ -0.46
PCDHGA9-202ENST00000616887 TRAPPC3O43617 180 aa12.18□□□□□ -0.46
PCDHGA9-202ENST00000616887 DIAPH2O60879 1101 aa12.18□□□□□ -0.46
PCDHGA9-202ENST00000616887 ITGBL1O95965 494 aaPredicted RBP12.18□□□□□ -0.46
PCDHGA9-202ENST00000616887 SRGAP2CP0DJJ0 459 aa12.18□□□□□ -0.46
PCDHGA9-202ENST00000616887 GARTP22102 1010 aa12.18□□□□□ -0.46
PCDHGA9-202ENST00000616887 PPIL2Q13356 520 aa12.18□□□□□ -0.46
PCDHGA9-202ENST00000616887 BIRC3Q13489 604 aa12.18□□□□□ -0.46
PCDHGA9-202ENST00000616887 SLC5A9Q2M3M2 681 aa12.18□□□□□ -0.46
PCDHGA9-202ENST00000616887 METTL7BQ6UX53 244 aa12.18□□□□□ -0.46
PCDHGA9-202ENST00000616887 ZBTB33Q86T24 672 aa12.18□□□□□ -0.46
PCDHGA9-202ENST00000616887 OR5B17Q8NGF7 314 aa12.18□□□□□ -0.46
PCDHGA9-202ENST00000616887 PSPC1Q8WXF1 523 aaKnown RBP12.18□□□□□ -0.46
PCDHGA9-202ENST00000616887 CCT6BQ92526 530 aa12.18□□□□□ -0.46
PCDHGA9-202ENST00000616887 HES6Q96HZ4 224 aa12.18□□□□□ -0.46
PCDHGA9-202ENST00000616887 INTUQ9ULD6 942 aa12.18□□□□□ -0.46
PCDHGA9-202ENST00000616887 CORO1CQ9ULV4 474 aaPredicted RBP12.18□□□□□ -0.46
PCDHGA9-202ENST00000616887 SRRM3A6NNA2 597 aaPredicted RBP12.17□□□□□ -0.46
PCDHGA9-202ENST00000616887 ZBTB42B2RXF5 422 aa12.17□□□□□ -0.46
PCDHGA9-202ENST00000616887 DDX3YO15523 660 aaKnown RBP12.17□□□□□ -0.46
PCDHGA9-202ENST00000616887 EXTL3O43909 919 aa12.17□□□□□ -0.46
PCDHGA9-202ENST00000616887 VNN1O95497 513 aa12.17□□□□□ -0.46
PCDHGA9-202ENST00000616887 CFHP08603 1231 aa12.17□□□□□ -0.46
PCDHGA9-202ENST00000616887 NAMPTP43490 491 aa12.17□□□□□ -0.46
PCDHGA9-202ENST00000616887 MFAP3P55082 362 aa12.17□□□□□ -0.46
PCDHGA9-202ENST00000616887 IFI16Q16666 785 aaKnown RBP12.17□□□□□ -0.46
PCDHGA9-202ENST00000616887 DDX42Q86XP3 938 aaKnown RBP eCLIP12.17□□□□□ -0.46
PCDHGA9-202ENST00000616887 TMC2Q8TDI7 906 aa12.17□□□□□ -0.46
PCDHGA9-202ENST00000616887 CASKIN2Q8WXE0 1202 aa12.17□□□□□ -0.46
PCDHGA9-202ENST00000616887 MMP19Q99542 508 aa12.17□□□□□ -0.46
PCDHGA9-202ENST00000616887 GPR20Q99678 358 aa12.17□□□□□ -0.46
PCDHGA9-202ENST00000616887 NIFKQ9BYG3 293 aaKnown RBP12.17□□□□□ -0.46
PCDHGA9-202ENST00000616887 RBAKQ9NYW8 714 aaPredicted RBP12.17□□□□□ -0.46
PCDHGA9-202ENST00000616887 TMEM59LQ9UK28 342 aa12.17□□□□□ -0.46
PCDHGA9-202ENST00000616887 KCNH4Q9UQ05 1017 aa12.17□□□□□ -0.46
PCDHGA9-202ENST00000616887 RPS6KL1Q9Y6S9 549 aa12.17□□□□□ -0.46
PCDHGA9-202ENST00000616887 CSDE1O75534 798 aaKnown RBP12.17□□□□□ -0.46
PCDHGA9-202ENST00000616887 LINGO3P0C6S8 592 aa12.17□□□□□ -0.46
PCDHGA9-202ENST00000616887 MYBL1P10243 752 aa12.17□□□□□ -0.46
PCDHGA9-202ENST00000616887 FKBP1BP68106 108 aa12.17□□□□□ -0.46
PCDHGA9-202ENST00000616887 SLC30A9Q6PML9 568 aa12.17□□□□□ -0.46
PCDHGA9-202ENST00000616887 C15orf39Q6ZRI6 1047 aa12.17□□□□□ -0.46
PCDHGA9-202ENST00000616887 IFT20Q8IY31 132 aa12.17□□□□□ -0.46
PCDHGA9-202ENST00000616887 AGAP11Q8TF27 550 aa12.17□□□□□ -0.46
PCDHGA9-202ENST00000616887 SEPT1Q8WYJ6 367 aa12.17□□□□□ -0.46
PCDHGA9-202ENST00000616887 DDX1Q92499 740 aaKnown RBP12.17□□□□□ -0.46
PCDHGA9-202ENST00000616887 FNBP1Q96RU3 617 aa12.17□□□□□ -0.46
PCDHGA9-202ENST00000616887 FAM167BQ9BTA0 163 aa12.17□□□□□ -0.46
PCDHGA9-202ENST00000616887 MSTO1Q9BUK6 570 aa12.17□□□□□ -0.46
PCDHGA9-202ENST00000616887 CELF4Q9BZC1 486 aaKnown RBP12.17□□□□□ -0.46
PCDHGA9-202ENST00000616887 TRIM7Q9C029 511 aa12.17□□□□□ -0.46
PCDHGA9-202ENST00000616887 ISCUQ9H1K1 167 aa12.17□□□□□ -0.46
PCDHGA9-202ENST00000616887 APOBEC3GQ9HC16 384 aaKnown RBP12.17□□□□□ -0.46
PCDHGA9-202ENST00000616887 SUCLA2Q9P2R7 463 aaPredicted RBP12.17□□□□□ -0.46
PCDHGA9-202ENST00000616887 AMFRQ9UKV5 643 aa12.17□□□□□ -0.46
PCDHGA9-202ENST00000616887 PLAAQ9Y263 795 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms