RNA–Protein interactions for RNA: ENST00000614488.4

SCAMP1-205, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,276 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-205ENST00000614488 TAP1Q03518 808 aa6.55□□□□□ -1.36
SCAMP1-205ENST00000614488 KHDC1Q4VXA5 237 aaKnown RBP6.55□□□□□ -1.36
SCAMP1-205ENST00000614488 NOMO2Q5JPE7 1267 aa6.55□□□□□ -1.36
SCAMP1-205ENST00000614488 FOXR2Q6PJQ5 311 aa6.55□□□□□ -1.36
SCAMP1-205ENST00000614488 SLC4A10Q6U841 1118 aa6.55□□□□□ -1.36
SCAMP1-205ENST00000614488 RGMAQ96B86 450 aa6.55□□□□□ -1.36
SCAMP1-205ENST00000614488 BOD1Q96IK1 185 aa6.55□□□□□ -1.36
SCAMP1-205ENST00000614488 RHOBTB2Q9BYZ6 727 aa6.55□□□□□ -1.36
SCAMP1-205ENST00000614488 GTPBP4Q9BZE4 634 aaKnown RBP6.55□□□□□ -1.36
SCAMP1-205ENST00000614488 SERHL2Q9H4I8 314 aa6.55□□□□□ -1.36
SCAMP1-205ENST00000614488 TMEM74BQ9NUR3 256 aa6.55□□□□□ -1.36
SCAMP1-205ENST00000614488 MAP3K2Q9Y2U5 619 aa6.55□□□□□ -1.36
SCAMP1-205ENST00000614488 NOX1Q9Y5S8 564 aa6.55□□□□□ -1.36
SCAMP1-205ENST00000614488 GRID2IPA4D2P6 1211 aa6.54□□□□□ -1.36
SCAMP1-205ENST00000614488 NT5C1B-RDH14C9J2C7 533 aa6.54□□□□□ -1.36
SCAMP1-205ENST00000614488 AKAP10O43572 662 aa6.54□□□□□ -1.36
SCAMP1-205ENST00000614488 SPDEFO95238 335 aa6.54□□□□□ -1.36
SCAMP1-205ENST00000614488 FOSP01100 380 aaPredicted RBP6.54□□□□□ -1.36
SCAMP1-205ENST00000614488 ANXA1P04083 346 aa6.54□□□□□ -1.36
SCAMP1-205ENST00000614488 KRT4P19013 534 aa6.54□□□□□ -1.36
SCAMP1-205ENST00000614488 CYP2C19P33261 490 aa6.54□□□□□ -1.36
SCAMP1-205ENST00000614488 HMGA2P52926 109 aa6.54□□□□□ -1.36
SCAMP1-205ENST00000614488 CXADRP78310 365 aa6.54□□□□□ -1.36
SCAMP1-205ENST00000614488 HSD11B2P80365 405 aa6.54□□□□□ -1.36
SCAMP1-205ENST00000614488 SNAPC2Q13487 334 aa6.54□□□□□ -1.36
SCAMP1-205ENST00000614488 MRGPRGQ86SM5 289 aa6.54□□□□□ -1.36
SCAMP1-205ENST00000614488 AOPEPQ8N6M6 819 aa6.54□□□□□ -1.36
SCAMP1-205ENST00000614488 MARS2Q96GW9 593 aaKnown RBP6.54□□□□□ -1.36
SCAMP1-205ENST00000614488 VRK1Q99986 396 aaPredicted RBP6.54□□□□□ -1.36
SCAMP1-205ENST00000614488 ALOXE3Q9BYJ1 711 aa6.54□□□□□ -1.36
SCAMP1-205ENST00000614488 GALNT9Q9HCQ5 603 aa6.54□□□□□ -1.36
SCAMP1-205ENST00000614488 GNL3LQ9NVN8 582 aaKnown RBP6.54□□□□□ -1.36
SCAMP1-205ENST00000614488 RLIMQ9NVW2 624 aa6.54□□□□□ -1.36
SCAMP1-205ENST00000614488 ANKFY1Q9P2R3 1169 aa6.54□□□□□ -1.36
SCAMP1-205ENST00000614488 USP25Q9UHP3 1055 aa6.54□□□□□ -1.36
SCAMP1-205ENST00000614488 WDR33Q9C0J8 1336 aaKnown RBP6.53□□□□□ -1.36
SCAMP1-205ENST00000614488 F2RL2O00254 374 aa6.53□□□□□ -1.36
SCAMP1-205ENST00000614488 FOXN1O15353 648 aa6.53□□□□□ -1.36
SCAMP1-205ENST00000614488 B3GALT2O43825 422 aa6.53□□□□□ -1.36
SCAMP1-205ENST00000614488 AGFG2O95081 481 aa6.53□□□□□ -1.36
SCAMP1-205ENST00000614488 CT47B1P0C2W7 299 aaPredicted RBP6.53□□□□□ -1.36
SCAMP1-205ENST00000614488 FCER1AP12319 257 aa6.53□□□□□ -1.36
SCAMP1-205ENST00000614488 ZEB1P37275 1124 aaPredicted RBP6.53□□□□□ -1.36
SCAMP1-205ENST00000614488 HK3P52790 923 aa6.53□□□□□ -1.36
SCAMP1-205ENST00000614488 NOGQ13253 232 aa6.53□□□□□ -1.36
SCAMP1-205ENST00000614488 PGS1Q32NB8 556 aa6.53□□□□□ -1.36
SCAMP1-205ENST00000614488 PLEKHG6Q3KR16 790 aa6.53□□□□□ -1.36
SCAMP1-205ENST00000614488 FLYWCH1Q4VC44 716 aa6.53□□□□□ -1.36
SCAMP1-205ENST00000614488 ODR4Q5SWX8 454 aa6.53□□□□□ -1.36
SCAMP1-205ENST00000614488 UTP14CQ5TAP6 766 aaKnown RBP6.53□□□□□ -1.36
SCAMP1-205ENST00000614488 ABHD17BQ5VST6 288 aa6.53□□□□□ -1.36
SCAMP1-205ENST00000614488 CATIPQ7Z7H3 387 aa6.53□□□□□ -1.36
SCAMP1-205ENST00000614488 MVB12AQ96EY5 273 aa6.53□□□□□ -1.36
SCAMP1-205ENST00000614488 WDR11Q9BZH6 1224 aa6.53□□□□□ -1.36
SCAMP1-205ENST00000614488 KMT5AQ9NQR1 393 aa6.53□□□□□ -1.36
SCAMP1-205ENST00000614488 AATKQ6ZMQ8 1374 aa6.53□□□□□ -1.36
SCAMP1-205ENST00000614488 PIPSLA2A3N6 862 aa6.52□□□□□ -1.37
SCAMP1-205ENST00000614488 CCDC78A2IDD5 438 aa6.52□□□□□ -1.37
SCAMP1-205ENST00000614488 UNC119BA6NIH7 251 aa6.52□□□□□ -1.37
SCAMP1-205ENST00000614488 FTLP02792 175 aaPredicted RBP6.52□□□□□ -1.37
SCAMP1-205ENST00000614488 TGM1P22735 817 aa6.52□□□□□ -1.37
SCAMP1-205ENST00000614488 SMARCA1P28370 1054 aa6.52□□□□□ -1.37
SCAMP1-205ENST00000614488 RAB27AP51159 221 aa6.52□□□□□ -1.37
SCAMP1-205ENST00000614488 TP53BP2Q13625 1128 aa6.52□□□□□ -1.37
SCAMP1-205ENST00000614488 ATAT1Q5SQI0 421 aa6.52□□□□□ -1.37
SCAMP1-205ENST00000614488 LAIR1Q6GTX8 287 aa6.52□□□□□ -1.37
SCAMP1-205ENST00000614488 Q6YL49 198 aa6.52□□□□□ -1.37
SCAMP1-205ENST00000614488 PDSS2Q86YH6 399 aa6.52□□□□□ -1.37
SCAMP1-205ENST00000614488 VRK3Q8IV63 474 aa6.52□□□□□ -1.37
SCAMP1-205ENST00000614488 HPS3Q969F9 1004 aa6.52□□□□□ -1.37
SCAMP1-205ENST00000614488 RNF31Q96EP0 1072 aa6.52□□□□□ -1.37
SCAMP1-205ENST00000614488 CHFRQ96EP1 664 aa6.52□□□□□ -1.37
SCAMP1-205ENST00000614488 FAM167AQ96KS9 214 aa6.52□□□□□ -1.37
SCAMP1-205ENST00000614488 COQ10AQ96MF6 247 aa6.52□□□□□ -1.37
SCAMP1-205ENST00000614488 AIFM3Q96NN9 605 aa6.52□□□□□ -1.37
SCAMP1-205ENST00000614488 RTFDC1Q9BY42 306 aaPredicted RBP6.52□□□□□ -1.37
SCAMP1-205ENST00000614488 CDH19Q9H159 772 aa6.52□□□□□ -1.37
SCAMP1-205ENST00000614488 WDCPQ9H6R7 721 aa6.52□□□□□ -1.37
SCAMP1-205ENST00000614488 HSFX1Q9UBD0 423 aa6.52□□□□□ -1.37
SCAMP1-205ENST00000614488 ZNF180Q9UJW8 692 aa6.52□□□□□ -1.37
SCAMP1-205ENST00000614488 MTO1Q9Y2Z2 717 aaKnown RBP6.52□□□□□ -1.37
SCAMP1-205ENST00000614488 MYADML2A6NDP7 307 aa6.51□□□□□ -1.37
SCAMP1-205ENST00000614488 LRRC14BA6NHZ5 514 aa6.51□□□□□ -1.37
SCAMP1-205ENST00000614488 RAMP2O60895 175 aa6.51□□□□□ -1.37
SCAMP1-205ENST00000614488 RFPL1O75677 317 aa6.51□□□□□ -1.37
SCAMP1-205ENST00000614488 GNAI3P08754 354 aa6.51□□□□□ -1.37
SCAMP1-205ENST00000614488 EGR2P11161 476 aaPredicted RBP6.51□□□□□ -1.37
SCAMP1-205ENST00000614488 IL12RB1P42701 662 aa6.51□□□□□ -1.37
SCAMP1-205ENST00000614488 AVPR1BP47901 424 aa6.51□□□□□ -1.37
SCAMP1-205ENST00000614488 GNAI1P63096 354 aa6.51□□□□□ -1.37
SCAMP1-205ENST00000614488 CYP2A13Q16696 494 aa6.51□□□□□ -1.37
SCAMP1-205ENST00000614488 CCDC93Q567U6 631 aa6.51□□□□□ -1.37
SCAMP1-205ENST00000614488 PCSK4Q6UW60 755 aa6.51□□□□□ -1.37
SCAMP1-205ENST00000614488 ANKRD13AQ8IZ07 590 aa6.51□□□□□ -1.37
SCAMP1-205ENST00000614488 ASB10Q8WXI3 467 aa6.51□□□□□ -1.37
SCAMP1-205ENST00000614488 KLHL32Q96NJ5 620 aa6.51□□□□□ -1.37
SCAMP1-205ENST00000614488 MAP3K14Q99558 947 aa6.51□□□□□ -1.37
SCAMP1-205ENST00000614488 TTPALQ9BTX7 342 aa6.51□□□□□ -1.37
SCAMP1-205ENST00000614488 SLC12A5Q9H2X9 1139 aa6.51□□□□□ -1.37
SCAMP1-205ENST00000614488 CYP4F11Q9HBI6 524 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms