RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 CCDC77Q9BR77 488 aa21.65■■□□□ 1.06
SSBP3-216ENST00000610401 TRABDQ9H4I3 376 aa21.65■■□□□ 1.06
SSBP3-216ENST00000610401 SBDSQ9Y3A5 250 aaKnown RBP eCLIP21.65■■□□□ 1.06
SSBP3-216ENST00000610401 PCDHB4Q9Y5E5 795 aa21.65■■□□□ 1.06
SSBP3-216ENST00000610401 TLR3O15455 904 aaKnown RBP21.65■■□□□ 1.06
SSBP3-216ENST00000610401 SLC1A5Q15758 541 aa21.65■■□□□ 1.06
SSBP3-216ENST00000610401 CLEC16AQ2KHT3 1053 aa21.65■■□□□ 1.06
SSBP3-216ENST00000610401 NBPF20Q3BBV1 942 aa21.65■■□□□ 1.06
SSBP3-216ENST00000610401 CC2D2BQ6DHV5 1058 aa21.65■■□□□ 1.06
SSBP3-216ENST00000610401 MFSD5Q6N075 450 aa21.65■■□□□ 1.06
SSBP3-216ENST00000610401 ROPN1BQ9BZX4 212 aaPredicted RBP21.65■■□□□ 1.06
SSBP3-216ENST00000610401 ROPN1Q9HAT0 212 aaPredicted RBP21.65■■□□□ 1.06
SSBP3-216ENST00000610401 C1orf112Q9NSG2 853 aa21.65■■□□□ 1.06
SSBP3-216ENST00000610401 WHRNQ9P202 907 aa21.65■■□□□ 1.06
SSBP3-216ENST00000610401 SGK1O00141 431 aa21.64■■□□□ 1.06
SSBP3-216ENST00000610401 CDH16O75309 829 aa21.64■■□□□ 1.06
SSBP3-216ENST00000610401 PECAM1P16284 738 aaPredicted RBP21.64■■□□□ 1.06
SSBP3-216ENST00000610401 DMP1Q13316 513 aaPredicted RBP21.64■■□□□ 1.06
SSBP3-216ENST00000610401 LONP2Q86WA8 852 aa21.64■■□□□ 1.06
SSBP3-216ENST00000610401 FNBP1Q96RU3 617 aa21.64■■□□□ 1.06
SSBP3-216ENST00000610401 STK24Q9Y6E0 443 aa21.64■■□□□ 1.06
SSBP3-216ENST00000610401 UMODL1Q5DID0 1318 aa21.64■■□□□ 1.06
SSBP3-216ENST00000610401 FAM47DPA6NHR8 397 aa21.64■■□□□ 1.05
SSBP3-216ENST00000610401 GRIN3BO60391 1043 aa21.64■■□□□ 1.05
SSBP3-216ENST00000610401 ATP5DP30049 168 aa21.64■■□□□ 1.05
SSBP3-216ENST00000610401 SSTR1P30872 391 aa21.64■■□□□ 1.05
SSBP3-216ENST00000610401 MRPS9P82933 396 aaKnown RBP21.64■■□□□ 1.05
SSBP3-216ENST00000610401 STRN3Q13033 797 aa21.64■■□□□ 1.05
SSBP3-216ENST00000610401 CYP1B1Q16678 543 aa21.64■■□□□ 1.05
SSBP3-216ENST00000610401 HHATQ5VTY9 493 aa21.64■■□□□ 1.05
SSBP3-216ENST00000610401 DTX3LQ8TDB6 740 aa21.64■■□□□ 1.05
SSBP3-216ENST00000610401 DDX1Q92499 740 aaKnown RBP21.64■■□□□ 1.05
SSBP3-216ENST00000610401 ZNF341Q9BYN7 854 aa21.64■■□□□ 1.05
SSBP3-216ENST00000610401 UVRAGQ9P2Y5 699 aa21.64■■□□□ 1.05
SSBP3-216ENST00000610401 CHKBQ9Y259 395 aa21.64■■□□□ 1.05
SSBP3-216ENST00000610401 GGPS1O95749 300 aa21.64■■□□□ 1.05
SSBP3-216ENST00000610401 FDX1P10109 184 aa21.64■■□□□ 1.05
SSBP3-216ENST00000610401 TKFCQ3LXA3 575 aa21.64■■□□□ 1.05
SSBP3-216ENST00000610401 MDH1BQ5I0G3 518 aa21.64■■□□□ 1.05
SSBP3-216ENST00000610401 ZBTB41Q5SVQ8 909 aa21.64■■□□□ 1.05
SSBP3-216ENST00000610401 PODNQ7Z5L7 613 aa21.64■■□□□ 1.05
SSBP3-216ENST00000610401 OAS1P00973 400 aaKnown RBP21.63■■□□□ 1.05
SSBP3-216ENST00000610401 PIK3CAP42336 1068 aa21.63■■□□□ 1.05
SSBP3-216ENST00000610401 PDIA2Q13087 525 aaKnown RBP21.63■■□□□ 1.05
SSBP3-216ENST00000610401 RHBDF2Q6PJF5 856 aa21.63■■□□□ 1.05
SSBP3-216ENST00000610401 DPH6Q7L8W6 267 aa21.63■■□□□ 1.05
SSBP3-216ENST00000610401 LRRC8CQ8TDW0 803 aa21.63■■□□□ 1.05
SSBP3-216ENST00000610401 CHURC1Q8WUH1 139 aa21.63■■□□□ 1.05
SSBP3-216ENST00000610401 DDX27Q96GQ7 796 aaKnown RBP21.63■■□□□ 1.05
SSBP3-216ENST00000610401 FAXDC2Q96IV6 333 aa21.63■■□□□ 1.05
SSBP3-216ENST00000610401 EBF2Q9HAK2 575 aa21.63■■□□□ 1.05
SSBP3-216ENST00000610401 PIK3CDO00329 1044 aa21.63■■□□□ 1.05
SSBP3-216ENST00000610401 FGFR1P11362 822 aa21.63■■□□□ 1.05
SSBP3-216ENST00000610401 GALNTL6Q49A17 601 aa21.63■■□□□ 1.05
SSBP3-216ENST00000610401 SPDYCQ5MJ68 293 aa21.63■■□□□ 1.05
SSBP3-216ENST00000610401 KIAA1586Q9HCI6 787 aa21.63■■□□□ 1.05
SSBP3-216ENST00000610401 FZD1Q9UP38 647 aa21.63■■□□□ 1.05
SSBP3-216ENST00000610401 ADGRA3Q8IWK6 1321 aa21.63■■□□□ 1.05
SSBP3-216ENST00000610401 F8VP50 259 aa21.62■■□□□ 1.05
SSBP3-216ENST00000610401 MAP3K6O95382 1288 aa21.62■■□□□ 1.05
SSBP3-216ENST00000610401 GM2AP17900 193 aa21.62■■□□□ 1.05
SSBP3-216ENST00000610401 KRT4P19013 534 aa21.62■■□□□ 1.05
SSBP3-216ENST00000610401 GBP1P32455 592 aa21.62■■□□□ 1.05
SSBP3-216ENST00000610401 CPA2P48052 419 aa21.62■■□□□ 1.05
SSBP3-216ENST00000610401 MMP14P50281 582 aa21.62■■□□□ 1.05
SSBP3-216ENST00000610401 ORC1Q13415 861 aa21.62■■□□□ 1.05
SSBP3-216ENST00000610401 TAF1BQ53T94 588 aaPredicted RBP21.62■■□□□ 1.05
SSBP3-216ENST00000610401 SLC39A4Q6P5W5 647 aa21.62■■□□□ 1.05
SSBP3-216ENST00000610401 SCARA5Q6ZMJ2 495 aa21.62■■□□□ 1.05
SSBP3-216ENST00000610401 MTDHQ86UE4 582 aaKnown RBP21.62■■□□□ 1.05
SSBP3-216ENST00000610401 SLC9A9Q8IVB4 645 aa21.62■■□□□ 1.05
SSBP3-216ENST00000610401 TMEM130Q8N3G9 435 aa21.62■■□□□ 1.05
SSBP3-216ENST00000610401 NUDCD1Q96RS6 583 aa21.62■■□□□ 1.05
SSBP3-216ENST00000610401 TMOD2Q9NZR1 351 aa21.62■■□□□ 1.05
SSBP3-216ENST00000610401 CTDP1Q9Y5B0 961 aaPredicted RBP21.62■■□□□ 1.05
SSBP3-216ENST00000610401 LRRD1A4D1F6 860 aa21.62■■□□□ 1.05
SSBP3-216ENST00000610401 CLUL1Q15846 466 aa21.62■■□□□ 1.05
SSBP3-216ENST00000610401 CYP4A22Q5TCH4 519 aa21.62■■□□□ 1.05
SSBP3-216ENST00000610401 MFSD7Q6UXD7 560 aa21.62■■□□□ 1.05
SSBP3-216ENST00000610401 ZNF516Q92618 1163 aa21.62■■□□□ 1.05
SSBP3-216ENST00000610401 ZWILCHQ9H900 591 aa21.62■■□□□ 1.05
SSBP3-216ENST00000610401 EHMT1Q9H9B1 1298 aa21.62■■□□□ 1.05
SSBP3-216ENST00000610401 GABBR1Q9UBS5 961 aa21.62■■□□□ 1.05
SSBP3-216ENST00000610401 ASTN2O75129 1339 aaPredicted RBP21.62■■□□□ 1.05
SSBP3-216ENST00000610401 CFAP69A5D8W1 941 aa21.62■■□□□ 1.05
SSBP3-216ENST00000610401 CCNE2O96020 404 aa21.62■■□□□ 1.05
SSBP3-216ENST00000610401 KRT1P04264 644 aa21.62■■□□□ 1.05
SSBP3-216ENST00000610401 MTFR1Q15390 333 aa21.62■■□□□ 1.05
SSBP3-216ENST00000610401 SMC6Q96SB8 1091 aa21.62■■□□□ 1.05
SSBP3-216ENST00000610401 STRA6Q9BX79 667 aa21.62■■□□□ 1.05
SSBP3-216ENST00000610401 IDI2Q9BXS1 227 aa21.62■■□□□ 1.05
SSBP3-216ENST00000610401 ARHGEF3Q9NR81 526 aa21.62■■□□□ 1.05
SSBP3-216ENST00000610401 DHX15O43143 795 aaKnown RBP21.61■■□□□ 1.05
SSBP3-216ENST00000610401 NPR1P16066 1061 aa21.61■■□□□ 1.05
SSBP3-216ENST00000610401 PSEN1P49768 467 aa21.61■■□□□ 1.05
SSBP3-216ENST00000610401 BRDTQ58F21 947 aaPredicted RBP21.61■■□□□ 1.05
SSBP3-216ENST00000610401 TNFAIP8L3Q5GJ75 292 aa21.61■■□□□ 1.05
SSBP3-216ENST00000610401 LVRNQ6Q4G3 990 aa21.61■■□□□ 1.05
SSBP3-216ENST00000610401 APBB1IPQ7Z5R6 666 aaPredicted RBP21.61■■□□□ 1.05
SSBP3-216ENST00000610401 FMNL3Q8IVF7 1028 aa21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms